lineage | Count |
---|---|
lineage4 | 64 |
61 | |
lineage4.9 | 30 |
lineage4.3.4 | 2 |
lineage2.2.1 | 7 |
lineage1.1.3.1 | 1 |
La1.8.1 | 2 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage2.1 | 1 |
lineage4.1.1.2 | 1 |
lineage4.1 | 2 |
lineage4.3.4.2.1 | 2 |
lineage1.1.2 | 1 |
lineage4.9;lineage2.1 | 1 |
lineage4.3.3 | 1 |
lineage4.1.2 | 2 |
lineage4.8 | 1 |
lineage4.3.2.1 | 1 |
lineage2.2 | 1 |
lineage4;lineage3.1 | 1 |
spoligotype | Count |
---|---|
None | 183 |
ID | Drug resistance | Lineage | Country iso2 | ERR736856 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6866022 | Other | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR1173568 | Other | lineage4.9 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | Sensitive | None | ERR158583 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR8692782 | Other | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692800 | Other | lineage4 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675502 | Other | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675510 | Other | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR4815471 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR176651 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675550 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR2446566 | Other | lineage4.1 | None | ERR1035162 | Other | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341418 | Other | None | ERR4819462 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4821655 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693227 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044876 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6045158 | Other | lineage4.9 | None | SRR6045399 | Other | None | SRR6511621 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046482 | HR-TB | None | ERR3077961 | MDR-TB | lineage4.3.3 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323045 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR067681 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR1034652 | Other | None | ERR1035122 | Sensitive | None | ERR1063855 | Other | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR133986 | HR-TB | None | ERR1063896 | Sensitive | None | ERR133825 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283028 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3797015 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR403298 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797264 | Sensitive | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
---|