Rv3106 - c.159C>G
Drug resistance types
24 Sensitive
3 RR-TB
55 HR-TB
4 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
19 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.1.1 | 3 |
| lineage4.1.2.1 | 9 |
| lineage4.5 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9 | 2 |
| lineage4.3.2 | 2 |
| lineage4.1 | 1 |
| 44 | |
| lineage3 | 5 |
| lineage4.3.4.2.1 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage3.1.1 | 2 |
| lineage2.2.1 | 3 |
| lineage4.8 | 8 |
| lineage4.3.3 | 2 |
| lineage4.1.1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4 | 3 |
| lineage4.3.4.1 | 1 |
| lineage4.1.1.3.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.8.2 | 2 |
| lineage3.1.2.1 | 1 |
| La1.2 | 1 |
| lineage1.1.2 | 1 |
| La3 | 1 |
| lineage3.1.2.2 | 1 |
| lineage3.1 | 2 |
| La1.8.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 11 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR13861381 | MDR-TB | lineage4.9 | None | ERR4814291 | Sensitive | lineage4.3.2 | gb | SRR3675464 | HR-TB | lineage4.1 | None | SRR1640750 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675222 | Other | None | ERR4815079 | RR-TB | lineage3 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | SRR3675545 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675501 | HR-TB | None | SRR3675383 | HR-TB | None | ERR2245281 | Sensitive | lineage3.1.1 | no | SRR3675558 | HR-TB | None | ERR4816399 | Sensitive | lineage2.2.1 | None | ERR2229154 | Sensitive | lineage4.8 | None | ERR2229762 | HR-TB | lineage4.8 | None | SRR3675571 | HR-TB | None | SRR3732572 | Sensitive | lineage4.1.2.1 | None | ERR2229243 | Sensitive | lineage4.8 | None | SRR3732622 | Sensitive | lineage4.3.3 | None | ERR2229520 | Sensitive | lineage4.8 | dk | ERR2229235 | RR-TB | lineage4.8 | None | ERR2228915 | Sensitive | lineage4.8 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4817202 | MDR-TB | lineage3.1.2 | gb | ERR2229426 | HR-TB | lineage4.8 | dk | ERR2229724 | Other | lineage4 | None | ERR4817968 | Sensitive | lineage2.2.1 | None | ERR4818663 | Other | lineage3 | None | ERR2513223 | Other | lineage4.1.2.1 | None | ERR2512453 | Sensitive | lineage3.1.1 | None | ERR4818036 | Sensitive | lineage4.1.2.1 | None | ERR4818194 | Sensitive | lineage4.3.4.1 | None | ERR4818346 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR2513738 | Other | lineage1.1.3.1 | None | ERR4820707 | Sensitive | lineage3 | gb | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR2514070 | Other | lineage3 | None | ERR2514486 | Sensitive | lineage4.1.2.1 | None | ERR2514142 | HR-TB | lineage1.2.2.2 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514479 | Other | lineage4.8.2 | gb | ERR4820871 | Sensitive | lineage3.1.2.1 | gb | SRR5341313 | HR-TB | None | ERR4819871 | Sensitive | lineage4.8 | None | ERR4820101 | Sensitive | lineage4.1.2.1 | None | SRR5486077 | Other | La1.2 | None | ERR4820946 | Other | lineage1.1.2 | gb | ERR4821020 | Other | lineage4.1.1.3.1 | None | ERR4821905 | Sensitive | lineage4.4.1.1 | gb | ERR2693239 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045604 | Sensitive | La3 | None | SRR6046127 | Sensitive | lineage3 | None | SRR6045267 | RR-TB | lineage4 | None | SRR6045053 | Other | None | SRR6046225 | HR-TB | None | SRR6045308 | Other | lineage3.1.2.2 | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6325444 | HR-TB | None | ERR278594 | HR-TB | None | ERR4830353 | Other | None | SRR6046460 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6485030 | Sensitive | lineage4.3.3 | None | SRR6485023 | Sensitive | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311099 | HR-TB | None | ERR3797043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR323041 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR3283017 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR9117707 | Sensitive | lineage4.8.2 | None | ERR6358837 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None |
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