Rv3106 - c.204A>G
Drug resistance types
1 Sensitive
0 RR-TB
109 HR-TB
8 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| 112 | |
| lineage4.1 | 1 |
| lineage2.2.1 | 6 |
| lineage4.1.1 | 1 |
| lineage4 | 5 |
| lineage4.3 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 7 |
| lineage2.2 | 5 |
| lineage4;lineage1.1 | 1 |
| lineage4.1.2.1 | 5 |
| lineage5.2 | 2 |
| lineage3.1 | 3 |
| La2 | 1 |
| lineage4.3.4.1;La1.7 | 1 |
| La1.8.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.3.2 | 1 |
| La3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19304036 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR8025503 | Pre-XDR-TB | lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675222 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675510 | Other | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR212001 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR212034 | HR-TB | None | SRR3675558 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3742665 | HR-TB | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4816585 | Other | lineage2.2 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4816656 | HR-TB | None | SRR5341470 | HR-TB | None | ERR4818615 | Other | None | SRR5341302 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341418 | Other | None | SRR5341333 | HR-TB | None | SRR5535933 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6046046 | Other | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6046397 | Other | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | ERR4828518 | HR-TB | lineage2.2.1 | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502532 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR323039 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323043 | HR-TB | None | ERR067681 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1035157 | Other | lineage4.9 | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR133986 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR4811105 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4811022 | HR-TB | None | ERR702406 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6358991 | HR-TB | None | ERR702404 | HR-TB | None | ERR736835 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR9786604 | Other | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR1167384 | Other | lineage4 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1169306 | Other | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1173166 | Other | lineage4.9 | None | SRR1173363 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173400 | Other | None | SRR1173629 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196768 | MDR-TB | None | SRR12416824 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR1640750 | HR-TB | None |
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