lineage | Count |
---|---|
lineage4.3.4.1 | 2 |
lineage4.1 | 1 |
91 | |
lineage2.2.1 | 1 |
lineage4.1.2.1 | 7 |
lineage4 | 4 |
lineage4.1.1.3 | 1 |
lineage2.2 | 2 |
lineage4.9 | 1 |
lineage5.2 | 2 |
lineage3.1 | 2 |
La2 | 1 |
lineage2.2.2 | 1 |
La1.8.1 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 119 |
ID | Drug resistance | Lineage | Country iso2 | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4815604 | HR-TB | None | SRR15399236 | MDR-TB | lineage4.3.4.1 | None | SRR1640750 | HR-TB | None | SRR19304036 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675465 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675482 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675222 | Other | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4813270 | Sensitive | lineage4.1.2.1 | None | SRR3675501 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675571 | HR-TB | None | ERR176740 | HR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | SRR3675550 | Other | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816466 | HR-TB | None | ERR234659 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR5341333 | HR-TB | None | SRR5341418 | Other | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR2693239 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR5535933 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046540 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6325447 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR323036 | HR-TB | None | ERR294248 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502889 | Other | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323043 | HR-TB | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR323063 | HR-TB | None | SRR7796667 | Pre-XDR-TB | lineage2.2.2 | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR067681 | HR-TB | None | ERR1034652 | Other | None | ERR3283017 | HR-TB | None | ERR133986 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR4769450 | HR-TB | None | ERR403298 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811105 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6336766 | Other | lineage1.2.1.2.1 | None | ERR6358837 | HR-TB | None | ERR736839 | Other | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736865 | HR-TB | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR736874 | HR-TB | None | ERR736867 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | SRR1172951 | Other | None | ERR9786604 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1184372 | MDR-TB | None | SRR1173629 | Other | None | SRR1175074 | MDR-TB | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR12142341 | HR-TB | None | SRR1184380 | HR-TB | None | SRR12416824 | HR-TB | None |
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