lineage | Count |
---|---|
89 | |
lineage4 | 2 |
lineage2.2.1 | 4 |
lineage2.2 | 1 |
lineage4.8 | 2 |
lineage1.2.1.2.1 | 1 |
lineage1.1.2 | 1 |
lineage4.3.2 | 1 |
lineage3.1 | 1 |
lineage4.5 | 1 |
lineage2 | 1 |
lineage4.9 | 2 |
lineage3;lineage2.2.1 | 1 |
lineage4.1 | 1 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 109 |
ID | Drug resistance | Lineage | Country iso2 | SRR6044790 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR5311081 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6789626 | Other | None | ERR502532 | HR-TB | None | ERR294248 | HR-TB | None | ERR323038 | HR-TB | None | ERR3283024 | Other | None | ERR323063 | HR-TB | None | ERR323043 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR3283017 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283027 | HR-TB | None | ERR4810741 | HR-TB | None | ERR3797014 | Other | None | ERR3797016 | HR-TB | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR4811105 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6336757 | Sensitive | lineage1.2.1.2.1 | None | ERR5336148 | Other | None | ERR6358991 | HR-TB | None | ERR6358837 | HR-TB | None | ERR736835 | HR-TB | None | ERR6359045 | HR-TB | None | ERR702406 | HR-TB | None | ERR736874 | HR-TB | None | ERR736839 | Other | None | SRR1169194 | Other | None | ERR8976043 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117805 | Other | lineage4.3.2 | None | SRR1172857 | MDR-TB | None | SRR1172728 | MDR-TB | None | SRR1172951 | Other | None | SRR1173629 | Other | None | SRR1173363 | HR-TB | None | SRR1173118 | Other | None | SRR1173400 | Other | None | SRR1184294 | HR-TB | None | SRR1173778 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR15368973 | Other | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR19303884 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | SRR3675221 | HR-TB | None | SRR26159043 | Other | lineage4.9 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675486 | HR-TB | None | ERR181744 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675234 | Other | None | SRR3675572 | Other | None | ERR176643 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR234659 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341302 | HR-TB | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | ERR2693254 | Other | None |
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