lineage | Count |
---|---|
lineage4.1.1.3 | 2 |
lineage4 | 2 |
lineage2.2 | 5 |
30 | |
lineage2.2.1 | 3 |
lineage5.2 | 2 |
lineage4.6.2.2 | 2 |
lineage4.8;lineage4.1 | 2 |
lineage4.3.4.1 | 1 |
spoligotype | Count |
---|---|
None | 49 |
ID | Drug resistance | Lineage | Country iso2 | ERR2515985 | Sensitive | lineage4.1.1.3 | None | SRR3675312 | HR-TB | lineage4 | None | ERR4816585 | Other | lineage2.2 | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675510 | Other | None | ERR212001 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | SRR5341333 | HR-TB | None | ERR323043 | HR-TB | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046540 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6896213 | Sensitive | lineage4.1.1.3 | None | ERR502532 | HR-TB | None | ERR702406 | HR-TB | None | ERR3283036 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR702404 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1175074 | MDR-TB | None | ERR9786843 | Other | None | SRR1173384 | Other | lineage4 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | SRR1172951 | Other | None | SRR1173363 | HR-TB | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR1184380 | HR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None |
---|