lineage | Count |
---|---|
lineage5.2 | 2 |
lineage2.2 | 3 |
lineage4.6.2.2 | 2 |
92 | |
lineage3.1 | 1 |
lineage1.1.1.1 | 27 |
lineage4.9 | 6 |
lineage4.1.2.1 | 2 |
lineage4 | 3 |
La1.8.1 | 1 |
lineage2.2.1;lineage1.1.1.1 | 1 |
La1 | 1 |
lineage4.8;lineage4.1 | 2 |
lineage2.2.1 | 2 |
lineage4.3.3 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 147 |
ID | Drug resistance | Lineage | Country iso2 | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496483 | HR-TB | lineage1.1.1.1 | None | ERR323038 | HR-TB | None | ERR323041 | HR-TB | None | ERR3797016 | HR-TB | None | ERR1034652 | Other | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283024 | Other | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1035113 | Sensitive | lineage1.1.1.1 | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR3797014 | Other | None | ERR3797061 | Other | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR4769452 | HR-TB | None | ERR387051 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4831734 | HR-TB | lineage2.2.1;lineage1.1.1.1 | vn | ERR4798262 | HR-TB | La1 | None | ERR4830350 | Sensitive | lineage1.1.1.1 | vn | ERR4798406 | HR-TB | None | ERR702404 | HR-TB | None | ERR4828404 | Other | lineage1.1.1.1 | vn | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR4830399 | Sensitive | lineage1.1.1.1 | vn | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | SRR21732250 | HR-TB | lineage1.1.1.1 | None | ERR702406 | HR-TB | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR22250134 | Sensitive | lineage1.1.1.1 | None | ERR736874 | HR-TB | None | ERR9119305 | Sensitive | lineage1.1.1.1 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119401 | Sensitive | lineage1.1.1.1 | None | ERR9119500 | MDR-TB | lineage5.2 | None | SRR1173400 | Other | None | ERR9125629 | Sensitive | lineage1.1.1.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786843 | Other | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1173629 | Other | None | SRR1184294 | HR-TB | None | SRR1183049 | Other | lineage2.2 | None | SRR12416824 | HR-TB | None | SRR1184380 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1640750 | HR-TB | None | SRR12882384 | HR-TB | lineage1.1.1.1 | None | SRR16058442 | Sensitive | lineage1.1.1.1 | None | SRR19303884 | HR-TB | None | SRR18914228 | Sensitive | lineage1.1.1.1 | None | SRR3675464 | HR-TB | lineage4.1 | None | DRR261128 | Sensitive | lineage1.1.1.1 | None | SRR26399303 | Sensitive | lineage1.1.1.1 | None | SRR26399772 | Sensitive | lineage1.1.1.1 | None | SRR26399516 | Sensitive | lineage1.1.1.1 | None | SRR19304036 | HR-TB | None | SRR26399613 | Sensitive | lineage1.1.1.1 | None | SRR26399697 | Sensitive | lineage1.1.1.1 | None | SRR26400048 | Sensitive | lineage1.1.1.1 | None | SRR3675488 | HR-TB | None | SRR3675465 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675234 | Other | None | SRR3675486 | HR-TB | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176643 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675456 | HR-TB | None | SRR3675510 | Other | None | ERR176751 | HR-TB | None | SRR3675550 | Other | None | SRR3675545 | HR-TB | None | ERR234659 | HR-TB | None | SRR3675555 | HR-TB | None | SRR3675558 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | SRR7496486 | HR-TB | lineage1.1.1.1 | us | SRR7496485 | HR-TB | lineage1.1.1.1 | us | SRR5074124 | Sensitive | lineage1.1.1.1 | vn | ERR212121 | HR-TB | None | DRR185067 | Sensitive | lineage1.1.1.1 | vn | SRR5067370 | Sensitive | lineage1.1.1.1 | vn | ERR4818929 | HR-TB | None | SRR5067449 | Sensitive | lineage1.1.1.1 | vn | ERR4818607 | Sensitive | lineage4.9 | None | SRR5073590 | Sensitive | lineage1.1.1.1 | vn | ERR2693230 | Other | None | SRR5341418 | Other | None | SRR5341302 | HR-TB | None | ERR2693231 | Other | None | ERR2693239 | HR-TB | None | SRR6045555 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6325442 | HR-TB | None | SRR6046362 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046397 | Other | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None |
---|