lineage | Count |
---|---|
La1.7.1 | 9 |
La1.8.1 | 18 |
lineage4.8.2 | 1 |
lineage3.1.1 | 2 |
2 | |
lineage4.6.1.1 | 2 |
lineage3 | 7 |
lineage4.6.1 | 3 |
lineage4.9 | 3 |
lineage1.1.2 | 2 |
lineage2.2.1 | 3 |
lineage4 | 1 |
lineage4.3.4.2.1 | 3 |
lineage4.1.2.1 | 3 |
lineage5.1.2 | 1 |
lineage4.1;lineage1.1.1.1 | 1 |
lineage4;lineage3.1.1;lineage1 | 1 |
lineage4.1.1 | 2 |
lineage3.1.2 | 3 |
lineage4.8 | 2 |
lineage1.2.2.1 | 1 |
lineage4.1.1.3.1 | 1 |
lineage4.4.1.1 | 2 |
lineage2.2.1.2 | 1 |
spoligotype | Count |
---|---|
None | 74 |
ID | Drug resistance | Lineage | Country iso2 | SRR1791708 | Other | La1.7.1 | None | SRR1791764 | Other | La1.8.1 | None | SRR1791776 | Other | La1.7.1 | None | SRR1791940 | Other | La1.8.1 | None | SRR1791780 | Other | La1.8.1 | None | SRR1791873 | Other | La1.8.1 | None | SRR1791995 | Other | La1.8.1 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792042 | Other | La1.8.1 | None | SRR1792059 | Other | La1.8.1 | None | SRR1792184 | Other | La1.7.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR1792077 | Other | La1.8.1 | None | SRR1792106 | Other | La1.8.1 | None | SRR1792205 | Other | La1.7.1 | None | SRR1792251 | Other | La1.7.1 | None | SRR1792506 | Other | La1.8.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR18213753 | Sensitive | lineage3.1.1 | None | SRR6650127 | Sensitive | None | ERR1199041 | Sensitive | lineage4.6.1.1 | None | SRR6650371 | Sensitive | lineage3 | None | ERR1199039 | Sensitive | lineage4.6.1 | None | SRR3105789 | MDR-TB | lineage4.9 | None | ERR1199053 | Sensitive | lineage4.6.1.1 | None | SRR4019484 | Other | La1.8.1 | None | SRR4019487 | Other | La1.8.1 | None | SRR4019488 | Other | La1.7.1 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR234101 | Sensitive | lineage2.2.1 | None | SRR4019491 | Other | La1.7.1 | None | ERR2229425 | Sensitive | lineage4 | None | ERR1199065 | Sensitive | lineage4.6.1 | None | ERR245824 | Sensitive | lineage4.3.4.2.1 | None | ERR245716 | Sensitive | lineage2.2.1 | None | ERR245821 | Other | lineage4.3.4.2.1 | None | ERR028330 | Sensitive | lineage4.6.1 | None | ERR2516537 | MDR-TB | lineage2.2.1 | None | ERR4820200 | Sensitive | lineage4.1.2.1 | None | ERR233352 | Sensitive | lineage4.1.2.1 | None | SRR8073606 | Other | La1.8.1 | None | ERR028354 | Sensitive | lineage5.1.2 | None | ERR028356 | Sensitive | lineage4.1;lineage1.1.1.1 | None | ERR028343 | HR-TB | lineage4;lineage3.1.1;lineage1 | None | ERR028362 | Sensitive | None | ERR046750 | Other | La1.8.1 | None | ERR046742 | Sensitive | lineage4.1.1 | None | ERR046801 | Sensitive | lineage3 | None | ERR046816 | Other | lineage3.1.2 | None | ERR046815 | Sensitive | lineage3.1.2 | None | ERR046811 | Sensitive | lineage3 | None | ERR046809 | Sensitive | lineage3 | None | ERR046944 | Pre-XDR-TB | lineage4.8 | None | ERR046817 | Sensitive | lineage4.9 | None | ERR046826 | Sensitive | lineage3 | None | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046818 | Sensitive | lineage3.1.2 | None | ERR046829 | Sensitive | lineage3 | None | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046899 | Sensitive | lineage4.8 | None | ERR046931 | Sensitive | lineage4.1.1 | None | ERR841795 | Other | La1.8.1 | None | ERR046985 | MDR-TB | lineage4.1.1.3.1 | None | ERR1367680 | Sensitive | lineage4.4.1.1 | None | ERR779659 | Sensitive | lineage3.1.1 | None | ERR046955 | Sensitive | lineage4.1.2.1 | None | ERR046987 | Sensitive | lineage3 | None | ERR779672 | Sensitive | lineage4.3.4.2.1 | None | SRR067498 | Sensitive | lineage2.2.1.2 | None | ERR841817 | Other | La1.8.1 | None | ERR841835 | Other | La1.8.1 | None | SRR034936 | Sensitive | lineage4.9 | None | ERR841874 | Other | La1.8.1 | None | SRR10272558 | Sensitive | lineage4.4.1.1 | None |
---|