Run ID: ERR3468753
Sample name:
Date: 01-04-2023 02:23:06
Number of reads: 22128
Percentage reads mapped: 0.85
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
gyrA | 9143 | c.1842T>C | synonymous_variant | 1.0 |
pepQ | 2859875 | p.Asp182Asn | missense_variant | 0.67 |
embB | 4247646 | p.Glu378Ala | missense_variant | 1.0 |