Run ID: ERR4814371
Sample name:
Date: 01-04-2023 13:15:18
Number of reads: 1813
Percentage reads mapped: 15.48
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rrs | 1472148 | n.303T>C | non_coding_transcript_exon_variant | 1.0 |
rrs | 1472150 | n.305T>A | non_coding_transcript_exon_variant | 1.0 |
rrl | 1473692 | n.35G>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476245 | n.2588C>T | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476252 | n.2595T>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476260 | n.2603A>G | non_coding_transcript_exon_variant | 1.0 |
rrl | 1476281 | n.2624T>C | non_coding_transcript_exon_variant | 1.0 |