Run ID: ERR4815657
Sample name:
Date: 01-04-2023 13:59:23
Number of reads: 2730651
Percentage reads mapped: 99.84
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
fbiC | 1304840 | p.Glu637Gly | missense_variant | 0.22 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472633 | n.788C>A | non_coding_transcript_exon_variant | 0.29 |
rrl | 1475932 | n.2275T>C | non_coding_transcript_exon_variant | 0.29 |
rrl | 1476144 | n.2491delG | non_coding_transcript_exon_variant | 0.33 |
rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.29 |