TB-Profiler result

Run: ERR4817037

Summary

Run ID: ERR4817037

Sample name:

Date: 01-04-2023 14:46:07

Number of reads: 30426

Percentage reads mapped: 26.56

Strain: lineage4.9

Drug-resistance: Other


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Drug resistance: This table reports drug-resistance associated mutations found in known resistance genes
Drug Resistance Supporting mutations
Lineage Table: The lineage is inferred by analysing lineage specific SNPs
Lineage Family Main Spoligotype RDs Frequency
lineage4 Euro-American LAM;T;S;X;H None 1.0
lineage4.9 Euro-American (H37Rv-like) T1 None 1.0
Drug resistance-Associated Mutations: This table reports mutations found in candidate resistance genes which have been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction Drugs
embB 4247588 p.Leu359Ile missense_variant 1.0 ethambutol
Non-Associated Mutations: This table reports mutations found in candidate resistance genes which have not been associated with drug resistance
Gene Chromosome position Mutation Type Estimated fraction
gyrB 6196 c.957C>T synonymous_variant 1.0
gyrB 6238 c.999G>A synonymous_variant 1.0
gyrB 6242 p.Arg335Lys missense_variant 1.0
gyrB 6250 c.1011A>G synonymous_variant 1.0
gyrB 6256 c.1017G>A synonymous_variant 1.0
gyrB 6268 c.1029C>G synonymous_variant 1.0
gyrB 6280 c.1041T>C synonymous_variant 1.0
gyrB 6286 c.1047T>C synonymous_variant 1.0
gyrB 6289 c.1050C>T synonymous_variant 1.0
gyrB 6292 c.1053G>C synonymous_variant 1.0
gyrA 6307 c.-995T>G upstream_gene_variant 1.0
gyrA 6319 c.-983G>C upstream_gene_variant 1.0
gyrA 6700 c.-602T>C upstream_gene_variant 1.0
gyrA 6703 c.-599G>C upstream_gene_variant 1.0
gyrA 6709 c.-593A>G upstream_gene_variant 1.0
gyrA 6712 c.-590G>C upstream_gene_variant 1.0
gyrA 6811 c.-491C>T upstream_gene_variant 1.0
gyrA 6952 c.-350C>G upstream_gene_variant 1.0
gyrA 6967 c.-335T>C upstream_gene_variant 1.0
gyrA 6973 c.-329G>C upstream_gene_variant 1.0
gyrA 6982 c.-320A>C upstream_gene_variant 1.0
gyrA 7007 c.-295C>T upstream_gene_variant 1.0
gyrA 7010 c.-292C>T upstream_gene_variant 1.0
gyrB 7023 p.Leu595Gln missense_variant 1.0
gyrA 7033 c.-269G>C upstream_gene_variant 1.0
gyrB 7051 p.Glu604Asp missense_variant 1.0
gyrA 7066 c.-236G>C upstream_gene_variant 1.0
gyrA 7078 c.-224A>C upstream_gene_variant 1.0
gyrA 7084 c.-218A>G upstream_gene_variant 1.0
gyrA 7090 c.-212C>T upstream_gene_variant 1.0
gyrA 7093 c.-209T>G upstream_gene_variant 1.0
gyrA 7099 c.-203G>A upstream_gene_variant 1.0
gyrA 7637 c.336C>G synonymous_variant 1.0
gyrA 7652 c.351C>T synonymous_variant 1.0
gyrA 7658 c.357A>G synonymous_variant 1.0
gyrA 7664 c.363T>C synonymous_variant 1.0
gyrA 7673 c.372G>A synonymous_variant 1.0
gyrA 7683 c.382_384delAGGinsCGC synonymous_variant 1.0
gyrA 7694 c.393A>G synonymous_variant 1.0
gyrA 7697 c.396C>G synonymous_variant 1.0
gyrA 7710 c.409_411delTTGinsCTC synonymous_variant 1.0
gyrA 7721 c.420G>A synonymous_variant 1.0
gyrA 7725 c.424C>T synonymous_variant 1.0
gyrA 7728 c.427_429delAGGinsCGC synonymous_variant 1.0
gyrA 7739 c.438C>T synonymous_variant 1.0
gyrA 7763 c.462T>C synonymous_variant 1.0
gyrA 7784 c.483A>G synonymous_variant 1.0
gyrA 8051 c.750C>G synonymous_variant 1.0
gyrA 8054 c.753T>C synonymous_variant 1.0
gyrA 8057 c.756A>G synonymous_variant 1.0
gyrA 8069 c.768T>C synonymous_variant 1.0
gyrA 8078 c.777A>G synonymous_variant 1.0
gyrA 8090 c.789C>A synonymous_variant 1.0
gyrA 8096 c.795T>A synonymous_variant 1.0
gyrA 8099 c.798T>C synonymous_variant 1.0
gyrA 8106 c.805C>T synonymous_variant 1.0
gyrA 8111 c.810G>C synonymous_variant 1.0
gyrA 8121 c.820T>C synonymous_variant 1.0
gyrA 8129 c.828T>C synonymous_variant 1.0
gyrA 8135 c.834C>G synonymous_variant 1.0
gyrA 8156 c.855T>C synonymous_variant 1.0
gyrA 8168 c.867A>G synonymous_variant 1.0
gyrA 8177 c.876A>C synonymous_variant 1.0
gyrA 8189 c.888G>C synonymous_variant 1.0
gyrA 8198 c.897T>C synonymous_variant 1.0
gyrA 8207 c.906T>C synonymous_variant 1.0
gyrA 8219 c.918T>C synonymous_variant 1.0
gyrA 8225 c.924T>C synonymous_variant 1.0
gyrA 8234 c.933T>C synonymous_variant 1.0
gyrA 8237 c.936A>G synonymous_variant 1.0
gyrA 8247 p.Ile316Val missense_variant 1.0
gyrA 8264 c.963T>C synonymous_variant 1.0
gyrA 8267 c.966G>C synonymous_variant 1.0
gyrA 8270 c.969G>T synonymous_variant 1.0
gyrA 8276 c.975G>A synonymous_variant 1.0
gyrA 8283 p.Ile328Leu missense_variant 1.0
gyrA 8288 c.987T>C synonymous_variant 1.0
gyrA 8294 c.993T>C synonymous_variant 1.0
gyrA 8324 c.1023T>C synonymous_variant 1.0
gyrA 8453 c.1152A>C synonymous_variant 1.0
gyrA 8459 c.1158G>A synonymous_variant 1.0
gyrA 8462 c.1161A>C synonymous_variant 1.0
gyrA 8465 c.1164C>G synonymous_variant 1.0
gyrA 8471 c.1170T>C synonymous_variant 1.0
gyrA 8472 c.1171C>T synonymous_variant 1.0
gyrA 8480 c.1179C>A synonymous_variant 1.0
gyrA 8486 c.1185T>C synonymous_variant 1.0
gyrA 8489 c.1188A>G synonymous_variant 1.0
gyrA 8504 c.1203G>C synonymous_variant 1.0
gyrA 8516 c.1215T>C synonymous_variant 1.0
gyrA 8519 c.1218A>C synonymous_variant 1.0
gyrA 8520 c.1219C>T synonymous_variant 1.0
gyrA 8528 c.1227G>C synonymous_variant 1.0
gyrA 8543 c.1242C>G synonymous_variant 1.0
gyrA 8546 c.1245T>C synonymous_variant 1.0
gyrA 8553 c.1252C>A synonymous_variant 1.0
gyrA 8818 p.Ser506Asn missense_variant 1.0
gyrA 8828 c.1527T>C synonymous_variant 1.0
gyrA 8829 c.1528T>C synonymous_variant 1.0
gyrA 8852 c.1551T>C synonymous_variant 1.0
gyrA 8858 c.1557T>C synonymous_variant 1.0
gyrA 8933 c.1632G>C synonymous_variant 1.0
gyrA 8946 c.1645_1647delTTGinsCTC synonymous_variant 1.0
gyrA 8966 c.1665C>G synonymous_variant 1.0
gyrA 8967 p.Ala556Arg missense_variant 1.0
gyrA 8987 c.1686C>A synonymous_variant 1.0
gyrA 8990 c.1689C>G synonymous_variant 1.0
gyrA 8996 c.1695T>C synonymous_variant 1.0
gyrA 8998 p.Leu566Trp missense_variant 1.0
gyrA 9017 c.1716C>G synonymous_variant 1.0
gyrA 9023 c.1722A>G synonymous_variant 1.0
gyrA 9029 c.1728T>C synonymous_variant 1.0
gyrA 9032 c.1731T>C synonymous_variant 1.0
gyrA 9050 p.Asp583Glu missense_variant 1.0
gyrA 9051 c.1750T>C synonymous_variant 1.0
fgd1 490896 c.114C>T synonymous_variant 1.0
fgd1 490905 c.123T>C synonymous_variant 0.75
fgd1 490911 c.129T>G synonymous_variant 0.75
fgd1 490917 c.135C>G synonymous_variant 0.75
fgd1 490921 p.Gln47Glu missense_variant 0.75
fgd1 490929 c.147C>G synonymous_variant 0.75
fgd1 490932 c.150T>C synonymous_variant 0.75
fgd1 490948 p.Ser56Ala missense_variant 0.75
fgd1 490962 c.180T>G synonymous_variant 0.75
fgd1 490974 c.192T>C synonymous_variant 0.75
fgd1 490977 c.195C>G synonymous_variant 0.75
fgd1 490980 p.Asn66Lys missense_variant 0.75
fgd1 490983 c.201G>C synonymous_variant 0.75
fgd1 490984 p.Leu68Ile missense_variant 0.75
fgd1 490987 p.Leu69Thr missense_variant 0.75
fgd1 490998 c.216T>C synonymous_variant 0.75
fgd1 491001 c.219G>C synonymous_variant 0.75
fgd1 491007 c.225G>C synonymous_variant 0.75
fgd1 491013 c.231C>G synonymous_variant 0.75
fgd1 491130 c.348C>G synonymous_variant 1.0
fgd1 491144 p.Ala121Asp missense_variant 1.0
fgd1 491151 c.369G>A synonymous_variant 0.67
fgd1 491181 c.399T>C synonymous_variant 0.75
fgd1 491184 c.402A>G synonymous_variant 0.75
fgd1 491191 p.Gly137Arg missense_variant 0.75
fgd1 491194 c.412_414delCTAinsTTG synonymous_variant 0.75
fgd1 491202 c.420G>C synonymous_variant 0.75
fgd1 491203 p.Gln141Glu missense_variant 0.75
fgd1 491212 p.Ser144Arg missense_variant 0.75
fgd1 491217 c.435T>C synonymous_variant 0.75
fgd1 491232 c.450T>C synonymous_variant 0.75
fgd1 491241 p.Asp153Glu missense_variant 0.8
fgd1 491244 c.462T>C synonymous_variant 0.8
fgd1 491259 c.477T>G synonymous_variant 0.8
fgd1 491349 c.567T>C synonymous_variant 1.0
fgd1 491364 c.582T>C synonymous_variant 1.0
fgd1 491367 c.585G>C synonymous_variant 1.0
mshA 575623 c.276C>G synonymous_variant 1.0
mshA 575629 c.282A>G synonymous_variant 1.0
mshA 575632 c.285G>C synonymous_variant 1.0
mshA 575635 c.288A>C synonymous_variant 1.0
mshA 575638 c.291T>C synonymous_variant 1.0
mshA 575641 c.294A>G synonymous_variant 1.0
mshA 575647 c.300G>C synonymous_variant 1.0
mshA 575649 p.Val101Ala missense_variant 1.0
mshA 575659 c.312A>G synonymous_variant 1.0
mshA 575662 c.315C>G synonymous_variant 1.0
mshA 575665 c.318G>A synonymous_variant 1.0
mshA 575674 c.327G>C synonymous_variant 1.0
mshA 575695 c.348C>G synonymous_variant 1.0
mshA 575701 c.354G>A synonymous_variant 1.0
mshA 575704 c.357T>G synonymous_variant 1.0
mshA 575705 c.358T>C synonymous_variant 1.0
mshA 575713 c.366G>A synonymous_variant 1.0
mshA 575719 c.372C>T synonymous_variant 1.0
mshA 575734 c.387T>G synonymous_variant 1.0
mshA 575737 c.390T>C synonymous_variant 1.0
ccsA 620346 c.456C>A synonymous_variant 1.0
ccsA 620362 p.Ala158Thr missense_variant 1.0
ccsA 620367 c.477T>C synonymous_variant 1.0
ccsA 620373 c.483C>G synonymous_variant 1.0
ccsA 620376 c.486G>C synonymous_variant 1.0
ccsA 620385 c.495G>C synonymous_variant 1.0
ccsA 620388 c.498A>G synonymous_variant 1.0
ccsA 620389 c.499C>T synonymous_variant 1.0
ccsA 620412 c.522T>C synonymous_variant 1.0
ccsA 620415 c.525T>C synonymous_variant 1.0
ccsA 620424 c.534G>C synonymous_variant 1.0
ccsA 620433 c.543C>G synonymous_variant 1.0
ccsA 620436 c.546T>A synonymous_variant 1.0
ccsA 620439 c.549T>C synonymous_variant 1.0
ccsA 620445 c.555A>G synonymous_variant 1.0
ccsA 620460 c.570T>G synonymous_variant 1.0
ccsA 620461 p.Val191Ile missense_variant 1.0
ccsA 620710 p.Val274Ile missense_variant 1.0
ccsA 620718 c.828G>C synonymous_variant 1.0
ccsA 620721 c.831G>C synonymous_variant 1.0
rpoB 760406 c.600G>C synonymous_variant 1.0
rpoB 760412 c.606C>G synonymous_variant 1.0
rpoB 760424 c.618C>G synonymous_variant 1.0
rpoB 760430 c.624T>C synonymous_variant 1.0
rpoB 760475 c.669A>G synonymous_variant 1.0
rpoB 760481 c.675G>C synonymous_variant 1.0
rpoB 760484 c.678A>G synonymous_variant 1.0
rpoB 760522 p.Ser239Asn missense_variant 1.0
rpoB 760532 c.726T>C synonymous_variant 1.0
rpoB 760533 p.Val243Thr missense_variant 1.0
rpoB 760541 c.735G>C synonymous_variant 1.0
rpoB 760547 c.741G>C synonymous_variant 1.0
rpoB 760563 p.Arg253Met missense_variant 1.0
rpoB 760591 p.Val262Ala missense_variant 1.0
rpoB 760611 c.805T>C synonymous_variant 1.0
rpoB 760646 c.840C>G synonymous_variant 1.0
rpoB 760655 c.849A>G synonymous_variant 1.0
rpoB 760661 c.855A>C synonymous_variant 1.0
rpoB 760670 c.864G>C synonymous_variant 1.0
rpoB 760674 c.868T>C synonymous_variant 1.0
rpoB 760679 c.873A>G synonymous_variant 1.0
rpoB 760683 c.877T>C synonymous_variant 1.0
rpoB 760715 c.909C>G synonymous_variant 1.0
rpoB 760718 c.912C>T synonymous_variant 1.0
rpoB 760724 c.918T>C synonymous_variant 1.0
rpoB 760730 c.924T>C synonymous_variant 1.0
rpoB 760886 c.1080A>G synonymous_variant 1.0
rpoB 760889 c.1083C>T synonymous_variant 1.0
rpoB 760925 c.1119T>C synonymous_variant 1.0
rpoB 760928 c.1122G>C synonymous_variant 1.0
rpoB 760934 c.1128C>T synonymous_variant 1.0
rpoB 760946 c.1140A>G synonymous_variant 1.0
rpoB 760949 c.1143C>T synonymous_variant 1.0
rpoB 760982 c.1176G>C synonymous_variant 1.0
rpoB 760985 c.1179G>C synonymous_variant 1.0
rpoB 760991 c.1185G>C synonymous_variant 1.0
rpoB 761006 c.1200C>G synonymous_variant 1.0
rpoB 761015 c.1209G>C synonymous_variant 1.0
rpoB 761021 c.1215G>C synonymous_variant 1.0
rpoB 761477 c.1671C>G synonymous_variant 1.0
rpoB 761492 c.1686G>C synonymous_variant 1.0
rpoB 761510 c.1704T>C synonymous_variant 1.0
rpoB 761537 c.1731C>G synonymous_variant 1.0
rpoB 761570 c.1764T>C synonymous_variant 1.0
rpoB 761573 c.1767C>G synonymous_variant 1.0
rpoB 761579 c.1773G>C synonymous_variant 1.0
rpoB 761588 c.1782C>T synonymous_variant 1.0
rpoB 761606 c.1800C>G synonymous_variant 1.0
rpoB 761612 c.1806G>C synonymous_variant 1.0
rpoB 761615 c.1809A>C synonymous_variant 1.0
rpoB 761636 c.1830G>T synonymous_variant 1.0
rpoB 761639 c.1833G>A synonymous_variant 1.0
rpoB 761765 c.1959T>C synonymous_variant 1.0
rpoB 761772 p.His656Ala missense_variant 1.0
rpoB 761778 p.Asn658Asp missense_variant 1.0
rpoB 761791 p.Arg662His missense_variant 1.0
rpoB 761813 c.2007T>C synonymous_variant 1.0
rpoB 761815 p.Ala670Glu missense_variant 1.0
rpoB 761834 c.2028T>C synonymous_variant 1.0
rpoB 761848 p.Cys681Ser missense_variant 1.0
rpoB 761852 c.2046C>G synonymous_variant 1.0
rpoB 761858 c.2052G>C synonymous_variant 1.0
rpoB 761873 c.2067A>C synonymous_variant 1.0
rpoB 761885 c.2079T>C synonymous_variant 1.0
rpoB 761906 c.2100C>G synonymous_variant 1.0
rpoB 761909 c.2103T>C synonymous_variant 1.0
rpoB 761912 c.2106T>C synonymous_variant 1.0
rpoB 761915 p.Asp703Glu missense_variant 1.0
rpoB 761916 p.Asp704Asn missense_variant 1.0
rpoB 761948 c.2142G>C synonymous_variant 1.0
rpoB 761954 c.2148C>G synonymous_variant 1.0
rpoB 762008 c.2202C>T synonymous_variant 1.0
rpoB 762014 c.2208C>T synonymous_variant 1.0
rpoB 762017 c.2211A>G synonymous_variant 1.0
rpoB 762053 c.2247T>C synonymous_variant 1.0
rpoB 762062 c.2256T>C synonymous_variant 1.0
rpoB 762065 c.2259T>C synonymous_variant 1.0
rpoB 762083 c.2277T>C synonymous_variant 1.0
rpoB 762086 c.2280G>C synonymous_variant 1.0
rpoB 762101 c.2295C>G synonymous_variant 1.0
rpoB 762114 p.Ile770Val missense_variant 1.0
rpoB 762131 c.2325C>G synonymous_variant 0.8
rpoB 762140 c.2334G>C synonymous_variant 1.0
rpoB 762143 c.2337T>C synonymous_variant 1.0
rpoB 762149 c.2343G>C synonymous_variant 1.0
rpoB 762167 c.2361T>C synonymous_variant 1.0
rpoB 762176 c.2370T>C synonymous_variant 1.0
rpoB 762185 c.2379G>C synonymous_variant 1.0
rpoB 762206 c.2400C>G synonymous_variant 1.0
rpoB 762233 c.2427G>C synonymous_variant 1.0
rpoB 762246 c.2440C>T synonymous_variant 1.0
rpoB 762254 c.2448T>G synonymous_variant 1.0
rpoB 762257 c.2451C>G synonymous_variant 1.0
rpoB 762266 c.2460T>C synonymous_variant 1.0
rpoB 762293 c.2487T>C synonymous_variant 1.0
rpoB 762338 c.2532T>C synonymous_variant 1.0
rpoB 762347 c.2541T>C synonymous_variant 1.0
rpoB 762362 p.Glu852Asp missense_variant 1.0
rpoB 762369 c.2563T>C synonymous_variant 1.0
rpoC 762398 c.-972T>C upstream_gene_variant 1.0
rpoC 762401 c.-969G>C upstream_gene_variant 1.0
rpoC 762404 c.-966T>C upstream_gene_variant 1.0
rpoC 762410 c.-960T>C upstream_gene_variant 1.0
rpoC 762416 c.-954A>G upstream_gene_variant 1.0
rpoC 762419 c.-951C>G upstream_gene_variant 1.0
rpoC 762434 c.-936T>C upstream_gene_variant 1.0
rpoB 762729 p.Gln975Lys missense_variant 1.0
rpoB 762736 p.Ala977Glu missense_variant 1.0
rpoB 762744 p.Gln980Ala missense_variant 1.0
rpoB 762750 p.Leu982Met missense_variant 1.0
rpoC 762753 c.-617T>C upstream_gene_variant 1.0
rpoC 762758 c.-612G>C upstream_gene_variant 1.0
rpoC 762782 c.-588T>C upstream_gene_variant 1.0
rpoB 762785 p.Asp993Glu missense_variant 1.0
rpoC 762788 c.-582G>C upstream_gene_variant 1.0
rpoB 762789 p.Leu995Met missense_variant 1.0
rpoC 762794 c.-576C>G upstream_gene_variant 1.0
rpoB 762799 p.Ala998Gly missense_variant 1.0
rpoB 762810 p.Ala1002Ser missense_variant 1.0
rpoB 762813 p.Met1003Val missense_variant 1.0
rpoC 762818 c.-552C>G upstream_gene_variant 1.0
rpoC 762827 c.-543G>C upstream_gene_variant 1.0
rpoC 762857 c.-513C>G upstream_gene_variant 1.0
rpoC 762929 c.-441G>C upstream_gene_variant 1.0
rpoC 762989 c.-381G>C upstream_gene_variant 1.0
rpoC 763013 c.-357C>G upstream_gene_variant 1.0
rpoC 763028 c.-342T>C upstream_gene_variant 1.0
rpoC 763031 c.-339T>G upstream_gene_variant 1.0
rpoC 763034 c.-336C>G upstream_gene_variant 1.0
rpoC 763040 c.-330C>G upstream_gene_variant 1.0
rpoC 763070 c.-300T>C upstream_gene_variant 1.0
rpoC 763085 c.-285C>G upstream_gene_variant 1.0
rpoC 763115 c.-255T>C upstream_gene_variant 1.0
rpoC 763136 c.-234C>T upstream_gene_variant 1.0
rpoC 763148 c.-222G>C upstream_gene_variant 1.0
rpoC 763158 c.-212C>T upstream_gene_variant 1.0
rpoC 763166 c.-204A>G upstream_gene_variant 1.0
rpoC 763190 c.-180C>T upstream_gene_variant 1.0
rpoC 763202 c.-168A>G upstream_gene_variant 1.0
rpoC 763205 c.-165G>C upstream_gene_variant 1.0
rpoC 763206 c.-164_-162delAGTinsTCG upstream_gene_variant 1.0
rpoC 763214 c.-156T>C upstream_gene_variant 1.0
rpoC 763226 c.-144A>G upstream_gene_variant 1.0
rpoC 763227 c.-143C>T upstream_gene_variant 1.0
rpoC 763238 c.-132T>C upstream_gene_variant 1.0
rpoC 763456 c.87A>G synonymous_variant 1.0
rpoC 763486 c.117T>G synonymous_variant 1.0
rpoC 763528 c.159G>A synonymous_variant 1.0
rpoC 763546 c.177A>G synonymous_variant 1.0
rpoC 763570 c.201G>C synonymous_variant 1.0
rpoC 763573 c.204G>C synonymous_variant 1.0
rpoC 763594 c.225C>T synonymous_variant 1.0
rpoC 763633 c.264T>C synonymous_variant 1.0
rpoC 763636 c.267T>C synonymous_variant 1.0
rpoC 763660 c.291T>G synonymous_variant 1.0
rpoC 763675 c.306C>G synonymous_variant 1.0
rpoC 763696 c.327T>C synonymous_variant 1.0
rpoC 763702 c.333C>G synonymous_variant 1.0
rpoC 763717 c.348T>C synonymous_variant 1.0
rpoC 763723 c.354G>C synonymous_variant 1.0
rpoC 763732 c.363C>G synonymous_variant 1.0
rpoC 763741 c.372C>T synonymous_variant 1.0
rpoC 763744 c.375G>C synonymous_variant 1.0
rpoC 763765 c.396T>C synonymous_variant 1.0
rpoC 763774 c.405G>C synonymous_variant 1.0
rpoC 763807 c.438T>C synonymous_variant 1.0
rpoC 763816 c.447C>G synonymous_variant 1.0
rpoC 763835 p.Ala156Met missense_variant 1.0
rpoC 763853 p.Val162Ile missense_variant 1.0
rpoC 763858 c.489A>G synonymous_variant 1.0
rpoC 763872 p.Gly168Ala missense_variant 1.0
rpoC 763876 p.Glu169Asp missense_variant 1.0
rpoC 763877 c.508_510delCTAinsTTG synonymous_variant 1.0
rpoC 763888 c.519G>C synonymous_variant 1.0
rpoC 763891 c.522G>C synonymous_variant 1.0
rpoC 763894 c.525A>G synonymous_variant 1.0
rpoC 763900 c.531G>C synonymous_variant 1.0
rpoC 763936 c.567C>G synonymous_variant 1.0
rpoC 763945 c.576T>C synonymous_variant 1.0
rpoC 763951 c.582G>C synonymous_variant 1.0
rpoC 764059 c.690G>T synonymous_variant 1.0
rpoC 764083 c.714A>G synonymous_variant 1.0
rpoC 764098 c.729A>G synonymous_variant 1.0
rpoC 764101 c.732C>G synonymous_variant 1.0
rpoC 764102 p.Val245Ile missense_variant 1.0
rpoC 764112 p.Tyr248Phe missense_variant 1.0
rpoC 764116 c.747C>T synonymous_variant 1.0
rpoC 764131 c.762T>C synonymous_variant 1.0
rpoC 764140 c.771C>T synonymous_variant 1.0
rpoC 764188 c.819A>G synonymous_variant 1.0
rpoC 764206 c.837T>C synonymous_variant 1.0
rpoC 764215 c.846A>G synonymous_variant 1.0
rpoC 764236 c.867G>A synonymous_variant 1.0
rpoC 764248 c.879C>G synonymous_variant 1.0
rpoC 764257 c.888G>C synonymous_variant 1.0
rpoC 764266 c.897T>C synonymous_variant 1.0
rpoC 764269 c.900G>C synonymous_variant 1.0
rpoC 764272 c.903G>C synonymous_variant 1.0
rpoC 764278 c.909A>G synonymous_variant 1.0
rpoC 764338 c.969G>A synonymous_variant 1.0
rpoC 764353 c.984G>C synonymous_variant 1.0
rpoC 764489 c.1120C>T synonymous_variant 1.0
rpoC 764497 c.1128A>G synonymous_variant 1.0
rpoC 764510 c.1141C>T synonymous_variant 1.0
rpoC 764527 c.1158C>T synonymous_variant 1.0
rpoC 764536 c.1167G>C synonymous_variant 1.0
rpoC 764539 c.1170C>G synonymous_variant 1.0
rpoC 764554 c.1185C>T synonymous_variant 1.0
rpoC 764560 c.1191T>C synonymous_variant 1.0
rpoC 764566 c.1197C>G synonymous_variant 1.0
rpoC 764575 c.1206T>G synonymous_variant 1.0
rpoC 764581 c.1212T>C synonymous_variant 1.0
rpoC 764593 c.1224C>T synonymous_variant 1.0
rpoC 764611 c.1242G>T synonymous_variant 1.0
rpoC 764650 c.1281G>C synonymous_variant 1.0
rpoC 764651 c.1282_1284delTCGinsAGC synonymous_variant 1.0
rpoC 764752 c.1383G>C synonymous_variant 1.0
rpoC 764764 c.1395T>C synonymous_variant 1.0
rpoC 764809 c.1440C>T synonymous_variant 1.0
rpoC 764815 c.1446A>G synonymous_variant 1.0
rpoC 764827 c.1458G>C synonymous_variant 1.0
rpoC 764858 c.1489T>C synonymous_variant 1.0
rpoC 764872 c.1503A>G synonymous_variant 1.0
rpoC 764888 c.1519T>C synonymous_variant 1.0
rpoC 764995 c.1626C>G synonymous_variant 1.0
rpoC 765019 c.1650A>G synonymous_variant 1.0
rpoC 765034 c.1665T>C synonymous_variant 1.0
rpoC 765040 c.1671T>C synonymous_variant 1.0
rpoC 765041 c.1672T>C synonymous_variant 1.0
rpoC 765047 c.1678T>C synonymous_variant 1.0
rpoC 765053 c.1684_1685delTCinsAG synonymous_variant 1.0
rpoC 765073 c.1704G>C synonymous_variant 1.0
rpoC 765076 c.1707A>G synonymous_variant 1.0
rpoC 765079 c.1710T>G synonymous_variant 1.0
rpoC 765082 c.1713G>C synonymous_variant 1.0
rpoC 765089 c.1720T>C synonymous_variant 1.0
rpoC 765103 c.1734G>T synonymous_variant 1.0
rpoC 765850 c.2481G>C synonymous_variant 1.0
rpoC 765883 c.2514C>G synonymous_variant 1.0
rpoC 765886 c.2517C>G synonymous_variant 1.0
rpoC 765892 c.2523T>C synonymous_variant 1.0
rpoC 765937 c.2568T>C synonymous_variant 1.0
rpoC 765967 c.2598C>T synonymous_variant 1.0
rpoC 765982 c.2613C>G synonymous_variant 1.0
rpoC 766426 c.3057C>T synonymous_variant 1.0
rpoC 766447 c.3078T>C synonymous_variant 1.0
rpoC 766462 c.3093G>C synonymous_variant 1.0
rpoC 766483 c.3114G>C synonymous_variant 1.0
rpoC 766484 p.Val1039Ile missense_variant 1.0
rpoC 766492 c.3123T>C synonymous_variant 1.0
rpoC 766522 c.3153C>G synonymous_variant 1.0
rpoC 766528 c.3159T>C synonymous_variant 1.0
rpoC 766531 c.3162G>C synonymous_variant 1.0
rpoC 766540 p.Asp1057Glu missense_variant 1.0
rpoC 766549 c.3180G>C synonymous_variant 1.0
rpoC 766972 c.3603G>C synonymous_variant 1.0
rpoC 766996 c.3627C>T synonymous_variant 1.0
rpoC 767009 c.3640_3642delTCGinsAGC synonymous_variant 1.0
rpoC 767014 c.3645G>C synonymous_variant 1.0
rpoC 767033 c.3664_3666delTCGinsAGC synonymous_variant 1.0
rpoC 767059 c.3690T>G synonymous_variant 1.0
rpoC 767062 c.3693C>A synonymous_variant 1.0
rpoC 767098 c.3729T>C synonymous_variant 1.0
rpoC 767119 c.3750A>G synonymous_variant 1.0
rpoC 767134 c.3765C>A synonymous_variant 1.0
rpoC 767158 c.3789T>C synonymous_variant 1.0
rpoC 767180 p.Ala1271Gln missense_variant 1.0
rpoC 767191 c.3822C>G synonymous_variant 1.0
rpoC 767206 c.3837C>G synonymous_variant 1.0
rpoC 767209 c.3840T>C synonymous_variant 1.0
rpoC 767212 c.3843G>C synonymous_variant 1.0
rpoC 767221 c.3852C>G synonymous_variant 1.0
rpoC 767230 c.3861G>C synonymous_variant 1.0
rpoC 767233 c.3864T>C synonymous_variant 1.0
rpoC 767263 c.3894T>C synonymous_variant 1.0
rpoC 767264 p.Ala1299Gln missense_variant 1.0
rpoC 767275 c.3906T>C synonymous_variant 1.0
rpoC 767278 c.3909T>C synonymous_variant 1.0
rpoC 767281 c.3912C>G synonymous_variant 1.0
rpoC 767284 c.3915C>T synonymous_variant 1.0
rpoC 767288 c.3919C>T synonymous_variant 1.0
rpoC 767317 c.3948C>G synonymous_variant 1.0
mmpL5 775921 c.2560C>T synonymous_variant 1.0
mmpL5 775937 c.2544G>C synonymous_variant 0.67
mmpL5 775975 c.2506T>C synonymous_variant 1.0
mmpL5 775981 p.Leu834Met missense_variant 1.0
mmpL5 776009 c.2472A>G synonymous_variant 1.0
mmpL5 776030 c.2451G>A synonymous_variant 1.0
mmpL5 776053 c.2428T>C synonymous_variant 1.0
mmpL5 776056 p.Val809Leu missense_variant 1.0
mmpL5 776060 c.2421C>G synonymous_variant 1.0
mmpL5 777101 c.1380C>G synonymous_variant 1.0
mmpL5 777110 c.1371T>G synonymous_variant 1.0
mmpL5 777115 p.Met456Leu missense_variant 1.0
mmpL5 777116 c.1365C>T synonymous_variant 1.0
mmpL5 777133 p.Val450Ile missense_variant 1.0
mmpL5 777139 c.1342C>T synonymous_variant 1.0
mmpL5 777158 c.1323C>G synonymous_variant 1.0
mmpL5 777164 c.1317C>G synonymous_variant 1.0
mmpL5 777170 c.1311T>C synonymous_variant 1.0
mmpL5 777173 c.1308C>G synonymous_variant 1.0
mmpL5 777176 p.Glu435Asp missense_variant 1.0
mmpL5 777185 c.1296G>C synonymous_variant 1.0
mmpL5 777191 c.1290C>G synonymous_variant 1.0
mmpL5 777194 c.1287A>G synonymous_variant 1.0
mmpL5 777206 c.1275A>G synonymous_variant 1.0
mmpL5 777212 p.Ala423Thr missense_variant 1.0
mmpL5 777215 c.1266C>G synonymous_variant 1.0
mmpL5 777218 c.1263G>A synonymous_variant 1.0
rpsL 781700 c.141G>C synonymous_variant 1.0
rpsL 781703 c.144G>T synonymous_variant 1.0
rpsL 781715 c.156T>C synonymous_variant 1.0
rpsL 781728 c.169T>C synonymous_variant 1.0
rpsL 781736 c.177T>C synonymous_variant 1.0
rpsL 781742 c.183C>T synonymous_variant 1.0
rpsL 781748 c.189C>G synonymous_variant 1.0
rpsL 781754 c.195G>C synonymous_variant 1.0
rpsL 781760 c.201T>C synonymous_variant 1.0
rpsL 781772 c.213C>A synonymous_variant 1.0
rpsL 781808 c.249C>T synonymous_variant 1.0
rpsL 781811 c.252C>T synonymous_variant 1.0
rpsL 781832 c.273T>G synonymous_variant 1.0
rpsL 781838 c.279G>C synonymous_variant 1.0
rpsL 781841 c.282C>G synonymous_variant 1.0
rpsL 781865 c.306G>C synonymous_variant 1.0
rpsL 781868 c.309T>C synonymous_variant 1.0
rpsL 781871 c.312G>C synonymous_variant 1.0
rpsL 781877 c.318T>C synonymous_variant 1.0
rpsL 781892 c.333A>G synonymous_variant 1.0
rpsL 781898 c.339A>T synonymous_variant 1.0
rpsL 781916 c.357T>C synonymous_variant 1.0
rpsL 781929 p.Gly124Ser missense_variant 1.0
rplC 800612 c.-197A>G upstream_gene_variant 1.0
rplC 800618 c.-191T>C upstream_gene_variant 1.0
rplC 800627 c.-182C>T upstream_gene_variant 1.0
fbiC 1303755 c.825T>C synonymous_variant 1.0
fbiC 1303761 c.831T>C synonymous_variant 1.0
fbiC 1303785 c.855G>C synonymous_variant 1.0
fbiC 1303789 p.Ile287Val missense_variant 1.0
fbiC 1303797 c.867A>G synonymous_variant 1.0
fbiC 1303818 c.888C>G synonymous_variant 1.0
fbiC 1303836 c.906G>C synonymous_variant 1.0
fbiC 1303845 c.915C>G synonymous_variant 1.0
fbiC 1303846 p.Phe306Val missense_variant 1.0
fbiC 1303854 c.924T>C synonymous_variant 1.0
fbiC 1303860 c.930A>C synonymous_variant 1.0
fbiC 1303866 p.Glu312Asp missense_variant 0.5
fbiC 1303884 c.954T>G synonymous_variant 1.0
fbiC 1303905 c.975G>C synonymous_variant 1.0
fbiC 1303914 c.984C>G synonymous_variant 1.0
fbiC 1304526 c.1596T>G synonymous_variant 1.0
fbiC 1304535 c.1605G>A synonymous_variant 1.0
fbiC 1304544 c.1614T>C synonymous_variant 1.0
fbiC 1304545 p.Val539Thr missense_variant 1.0
fbiC 1304553 c.1623C>T synonymous_variant 1.0
fbiC 1304559 p.Glu543Asp missense_variant 1.0
fbiC 1304565 c.1635C>G synonymous_variant 1.0
fbiC 1304568 c.1638T>C synonymous_variant 1.0
fbiC 1304580 c.1650T>C synonymous_variant 1.0
fbiC 1304613 c.1683T>C synonymous_variant 1.0
fbiC 1304634 c.1704C>G synonymous_variant 1.0
fbiC 1304640 c.1710A>C synonymous_variant 1.0
fbiC 1304808 c.1878C>G synonymous_variant 1.0
fbiC 1304811 c.1881C>G synonymous_variant 1.0
fbiC 1304817 c.1887T>C synonymous_variant 1.0
fbiC 1304829 c.1899T>C synonymous_variant 1.0
fbiC 1304832 c.1902C>T synonymous_variant 1.0
fbiC 1304853 c.1923C>T synonymous_variant 1.0
fbiC 1304856 c.1926C>G synonymous_variant 1.0
fbiC 1304869 c.1939C>T synonymous_variant 1.0
fbiC 1304875 p.Ile649Val missense_variant 1.0
fbiC 1304883 p.Glu651Asp missense_variant 1.0
fbiC 1304891 p.Ile654Thr missense_variant 1.0
fbiC 1304893 p.Gly655Ser missense_variant 1.0
fbiC 1304907 c.1977C>G synonymous_variant 1.0
fbiC 1304910 c.1980G>C synonymous_variant 1.0
fbiC 1304916 c.1986T>C synonymous_variant 1.0
fbiC 1304928 c.1998T>C synonymous_variant 1.0
fbiC 1304937 c.2007G>C synonymous_variant 1.0
rrs 1471647 n.-199G>A upstream_gene_variant 0.67
rrs 1471648 n.-198A>G upstream_gene_variant 0.67
rrs 1471659 n.-187C>T upstream_gene_variant 1.0
rrs 1471665 n.-181G>A upstream_gene_variant 0.67
rrs 1471668 n.-178G>A upstream_gene_variant 0.67
rrs 1471673 n.-172delG upstream_gene_variant 0.67
rrs 1471681 n.-164_-159delGCAAGC upstream_gene_variant 0.67
rrs 1473290 n.1445C>T non_coding_transcript_exon_variant 1.0
rrl 1475642 n.1985T>C non_coding_transcript_exon_variant 1.0
rrl 1475657 n.2000A>G non_coding_transcript_exon_variant 1.0
rrl 1475659 n.2002G>T non_coding_transcript_exon_variant 1.0
rrl 1476583 n.2926G>A non_coding_transcript_exon_variant 1.0
rrl 1476584 n.2927C>T non_coding_transcript_exon_variant 1.0
rrl 1476594 n.2937C>T non_coding_transcript_exon_variant 1.0
rrl 1476597 n.2940G>A non_coding_transcript_exon_variant 1.0
rrl 1476603 n.2946G>A non_coding_transcript_exon_variant 1.0
rrl 1476628 n.2971T>A non_coding_transcript_exon_variant 1.0
rrl 1476689 n.3032A>T non_coding_transcript_exon_variant 1.0
rrl 1476690 n.3033C>T non_coding_transcript_exon_variant 1.0
rrl 1476693 n.3036G>A non_coding_transcript_exon_variant 1.0
rrl 1476695 n.3038T>A non_coding_transcript_exon_variant 1.0
rrl 1476716 n.3059A>C non_coding_transcript_exon_variant 1.0
inhA 1673547 c.-655T>C upstream_gene_variant 1.0
inhA 1673568 c.-634C>G upstream_gene_variant 1.0
inhA 1673574 c.-628C>G upstream_gene_variant 1.0
inhA 1673580 c.-622T>G upstream_gene_variant 1.0
inhA 1673589 c.-613A>G upstream_gene_variant 1.0
inhA 1673591 c.-611C>T upstream_gene_variant 1.0
inhA 1673595 c.-607A>C upstream_gene_variant 1.0
fabG1 1673596 p.Lys53Glu missense_variant 1.0
inhA 1673602 c.-600C>T upstream_gene_variant 1.0
inhA 1673607 c.-595T>C upstream_gene_variant 1.0
fabG1 1673615 p.Glu59Val missense_variant 1.0
inhA 1673619 c.-583T>C upstream_gene_variant 1.0
fabG1 1673633 p.Ser65Asn missense_variant 1.0
fabG1 1673637 p.Asp66Glu missense_variant 1.0
fabG1 1673641 p.Val68Ile missense_variant 1.0
inhA 1673646 c.-556T>C upstream_gene_variant 1.0
fabG1 1673657 p.Thr73Lys missense_variant 1.0
inhA 1673660 c.-542C>A upstream_gene_variant 1.0
inhA 1673664 c.-538A>C upstream_gene_variant 1.0
inhA 1673667 c.-535A>G upstream_gene_variant 1.0
inhA 1674537 c.336C>G synonymous_variant 1.0
inhA 1674542 p.Ala114Glu missense_variant 1.0
inhA 1674546 c.345T>C synonymous_variant 1.0
inhA 1674549 c.348G>C synonymous_variant 1.0
inhA 1674555 c.354G>A synonymous_variant 1.0
inhA 1674561 c.360C>T synonymous_variant 1.0
inhA 1674582 c.381T>C synonymous_variant 1.0
inhA 1674585 c.384T>C synonymous_variant 1.0
inhA 1674589 p.Met130Leu missense_variant 1.0
inhA 1674601 p.Leu134Thr missense_variant 1.0
inhA 1674624 c.423A>C synonymous_variant 1.0
inhA 1674660 c.459G>C synonymous_variant 1.0
rpsA 1833595 c.54T>C synonymous_variant 1.0
rpsA 1833661 c.120A>G synonymous_variant 1.0
rpsA 1833667 c.126C>G synonymous_variant 1.0
rpsA 1833721 c.180A>G synonymous_variant 1.0
rpsA 1833724 c.183C>G synonymous_variant 1.0
rpsA 1833727 c.186G>C synonymous_variant 1.0
rpsA 1833742 c.201A>G synonymous_variant 1.0
rpsA 1833745 c.204G>C synonymous_variant 1.0
rpsA 1833748 c.207C>G synonymous_variant 1.0
rpsA 1833802 c.261A>G synonymous_variant 1.0
rpsA 1833811 c.270G>T synonymous_variant 1.0
rpsA 1833838 c.297G>C synonymous_variant 1.0
rpsA 1833841 c.300C>G synonymous_variant 1.0
rpsA 1833847 c.306C>G synonymous_variant 1.0
rpsA 1833856 c.315A>G synonymous_variant 1.0
rpsA 1833886 c.345C>G synonymous_variant 1.0
rpsA 1833928 c.387G>C synonymous_variant 1.0
rpsA 1833940 c.399C>G synonymous_variant 1.0
rpsA 1834303 c.762T>C synonymous_variant 1.0
rpsA 1834306 c.765T>C synonymous_variant 1.0
rpsA 1834396 c.855G>C synonymous_variant 1.0
rpsA 1834411 c.870T>C synonymous_variant 1.0
rpsA 1834417 c.876G>C synonymous_variant 1.0
rpsA 1834423 c.882G>C synonymous_variant 1.0
rpsA 1834540 c.999G>C synonymous_variant 1.0
rpsA 1834546 c.1005T>C synonymous_variant 1.0
rpsA 1834555 c.1014T>G synonymous_variant 1.0
rpsA 1834609 c.1068T>C synonymous_variant 1.0
rpsA 1834618 c.1077G>C synonymous_variant 1.0
rpsA 1834690 c.1149T>C synonymous_variant 1.0
rpsA 1834732 c.1191T>C synonymous_variant 1.0
rpsA 1834733 p.Ala398Ser missense_variant 1.0
rpsA 1834738 c.1197A>G synonymous_variant 1.0
rpsA 1834753 c.1212T>C synonymous_variant 1.0
rpsA 1834765 p.Glu408Asp missense_variant 1.0
rpsA 1834775 p.Ala412Thr missense_variant 1.0
rpsA 1834780 c.1239A>G synonymous_variant 1.0
rpsA 1834786 c.1245A>G synonymous_variant 1.0
rpsA 1834789 c.1248T>C synonymous_variant 1.0
rpsA 1834792 c.1251G>C synonymous_variant 1.0
tlyA 1917908 c.-32C>G upstream_gene_variant 1.0
tlyA 1917929 c.-11T>C upstream_gene_variant 1.0
tlyA 1917937 c.-3_-2insC upstream_gene_variant 1.0
tlyA 1917940 p.Val1Met missense_variant 1.0
tlyA 1917943 p.Ala2Ser missense_variant 1.0
tlyA 1917951 c.12T>C synonymous_variant 1.0
tlyA 1917972 c.33A>G synonymous_variant 1.0
tlyA 1917975 c.36C>G synonymous_variant 0.67
tlyA 1917981 c.42G>C synonymous_variant 0.67
tlyA 1917990 c.51G>C synonymous_variant 0.67
tlyA 1917993 c.54A>G synonymous_variant 0.67
tlyA 1917996 c.57A>G synonymous_variant 0.67
tlyA 1918002 c.63A>G synonymous_variant 0.67
ndh 2101912 c.1131G>C synonymous_variant 1.0
ndh 2101920 c.1123A>C synonymous_variant 1.0
ndh 2101924 c.1119T>G synonymous_variant 1.0
ndh 2101939 c.1104A>G synonymous_variant 1.0
ndh 2101951 c.1092C>T synonymous_variant 1.0
kasA 2518825 c.711T>C synonymous_variant 1.0
kasA 2518864 c.750G>C synonymous_variant 1.0
kasA 2518879 c.765A>G synonymous_variant 1.0
kasA 2518885 c.771T>C synonymous_variant 1.0
kasA 2518898 c.784T>C synonymous_variant 1.0
kasA 2518906 c.792A>G synonymous_variant 1.0
kasA 2518910 p.Leu266Met missense_variant 1.0
kasA 2518921 c.807T>C synonymous_variant 1.0
kasA 2518936 c.822C>G synonymous_variant 1.0
kasA 2518939 c.825T>C synonymous_variant 1.0
kasA 2518942 c.828T>C synonymous_variant 1.0
kasA 2518951 c.837G>C synonymous_variant 1.0
kasA 2518954 c.840C>G synonymous_variant 1.0
ahpC 2726579 c.387T>C synonymous_variant 1.0
ahpC 2726591 c.399C>G synonymous_variant 1.0
ahpC 2726593 p.Val134Ala missense_variant 1.0
ahpC 2726600 c.408T>C synonymous_variant 1.0
ahpC 2726601 p.Ile137Leu missense_variant 1.0
ahpC 2726638 p.Ala149Val missense_variant 1.0
ahpC 2726645 c.453C>G synonymous_variant 1.0
ahpC 2726657 c.465A>C synonymous_variant 1.0
ahpC 2726669 p.Asp159Glu missense_variant 1.0
ahpC 2726672 c.480G>A synonymous_variant 1.0
ahpC 2726675 c.483A>G synonymous_variant 1.0
ahpC 2726681 c.489A>C synonymous_variant 1.0
ahpC 2726687 c.495C>G synonymous_variant 1.0
ahpC 2726693 c.501C>G synonymous_variant 1.0
ahpC 2726696 c.504C>G synonymous_variant 1.0
ahpC 2726717 c.525A>G synonymous_variant 1.0
Rv2752c 3064914 c.1278T>G synonymous_variant 1.0
Rv2752c 3064926 c.1264_1266delTTGinsCTC synonymous_variant 1.0
Rv2752c 3064932 c.1260T>C synonymous_variant 1.0
Rv2752c 3064935 c.1257A>G synonymous_variant 1.0
Rv2752c 3064941 p.Gln417Glu missense_variant 1.0
Rv2752c 3064947 c.1245A>G synonymous_variant 1.0
Rv2752c 3064956 p.Ser412Arg missense_variant 1.0
Rv2752c 3064962 c.1230C>G synonymous_variant 1.0
Rv2752c 3064973 p.Ala407Ser missense_variant 1.0
Rv2752c 3064974 c.1218T>C synonymous_variant 1.0
Rv2752c 3064995 c.1197C>G synonymous_variant 1.0
Rv2752c 3064998 c.1194A>G synonymous_variant 1.0
Rv2752c 3065007 c.1185G>C synonymous_variant 1.0
Rv2752c 3065013 c.1179G>C synonymous_variant 1.0
Rv2752c 3065018 p.Asn392His missense_variant 1.0
Rv2752c 3065022 c.1170G>C synonymous_variant 1.0
Rv2752c 3065028 p.Val388Ile missense_variant 1.0
Rv2752c 3065040 c.1152C>G synonymous_variant 1.0
Rv2752c 3065048 c.1144C>T synonymous_variant 1.0
Rv2752c 3065146 p.Phe349Tyr missense_variant 1.0
Rv2752c 3065151 c.1041G>C synonymous_variant 1.0
Rv2752c 3065183 p.Ser337Ala missense_variant 1.0
Rv2752c 3065186 c.1006T>C synonymous_variant 1.0
Rv2752c 3065190 p.Ile334Val missense_variant 1.0
Rv2752c 3065196 c.996T>C synonymous_variant 1.0
Rv2752c 3065202 c.990T>G synonymous_variant 1.0
Rv2752c 3065205 c.987T>C synonymous_variant 1.0
Rv2752c 3065210 c.982T>C synonymous_variant 1.0
Rv2752c 3065223 c.969T>C synonymous_variant 1.0
Rv2752c 3065229 c.963G>C synonymous_variant 1.0
Rv2752c 3065232 c.960T>C synonymous_variant 1.0
Rv2752c 3065241 c.951A>G synonymous_variant 1.0
Rv2752c 3065262 c.930G>A synonymous_variant 1.0
Rv2752c 3065268 c.924A>G synonymous_variant 1.0
Rv2752c 3065288 c.904T>C synonymous_variant 1.0
thyX 3067232 c.714C>G synonymous_variant 1.0
thyX 3067246 p.Thr234Ala missense_variant 1.0
thyX 3067249 p.Thr233Ser missense_variant 1.0
thyX 3067250 p.Val232Ile missense_variant 1.0
thyX 3067274 c.672C>G synonymous_variant 1.0
thyX 3067277 c.669C>G synonymous_variant 1.0
thyX 3067281 p.Val222Ala missense_variant 1.0
thyX 3067284 p.Ala221Gly missense_variant 1.0
thyX 3067286 c.660C>G synonymous_variant 1.0
thyX 3067289 c.657C>G synonymous_variant 1.0
thyX 3067292 c.654G>A synonymous_variant 1.0
thyX 3067295 c.651C>T synonymous_variant 1.0
thyX 3067316 c.630A>G synonymous_variant 1.0
thyX 3067325 c.621A>G synonymous_variant 1.0
thyX 3067349 c.597G>C synonymous_variant 1.0
thyX 3067445 c.501C>G synonymous_variant 1.0
thyX 3067457 c.489C>G synonymous_variant 1.0
thyX 3067462 c.484C>T synonymous_variant 1.0
thyX 3067465 p.Ile161Val missense_variant 1.0
thyX 3067475 c.471A>G synonymous_variant 1.0
thyX 3067490 c.456C>G synonymous_variant 1.0
thyX 3067493 c.453A>G synonymous_variant 1.0
thyX 3067515 p.Ser144Thr missense_variant 1.0
thyX 3067530 p.Ala139Ser missense_variant 1.0
thyX 3067545 p.Glu134Ala missense_variant 1.0
thyX 3067549 p.Thr133Ala missense_variant 1.0
thyX 3067718 c.228C>G synonymous_variant 1.0
thyX 3067721 c.225T>C synonymous_variant 1.0
thyX 3067727 c.219A>C synonymous_variant 1.0
thyX 3067736 p.Phe70Leu missense_variant 1.0
thyX 3067739 c.207T>C synonymous_variant 1.0
thyX 3067754 c.192C>T synonymous_variant 1.0
thyX 3067761 p.Arg62Lys missense_variant 1.0
thyX 3067765 p.Leu61Ile missense_variant 1.0
thyX 3067772 c.174C>G synonymous_variant 1.0
thyX 3067781 c.165C>G synonymous_variant 1.0
thyX 3067793 c.153T>C synonymous_variant 1.0
thyX 3067799 c.147G>A synonymous_variant 1.0
thyX 3067802 c.144C>G synonymous_variant 1.0
thyX 3067814 c.132T>C synonymous_variant 1.0
thyX 3067850 c.96A>C synonymous_variant 1.0
thyX 3067869 p.Thr26Ser missense_variant 1.0
thyX 3067874 c.72C>G synonymous_variant 1.0
thyX 3067883 c.63C>G synonymous_variant 1.0
thyX 3067886 c.60A>C synonymous_variant 1.0
thyX 3067889 c.57C>G synonymous_variant 1.0
thyX 3067898 p.Asp16Glu missense_variant 1.0
thyA 3074079 c.393G>C synonymous_variant 1.0
thyA 3074097 c.375C>G synonymous_variant 1.0
thyA 3074100 p.Asp124Asn missense_variant 1.0
thyA 3074106 c.366T>C synonymous_variant 1.0
fprA 3474081 c.75C>G synonymous_variant 1.0
fprA 3474088 p.Thr28Ala missense_variant 1.0
fprA 3474091 p.Thr29Ser missense_variant 1.0
fprA 3474094 p.Glu30Gln missense_variant 1.0
fprA 3474100 p.Leu32Ile missense_variant 1.0
fprA 3474105 c.99C>T synonymous_variant 1.0
fprA 3474106 p.Met34Val missense_variant 1.0
fprA 3474114 c.108C>T synonymous_variant 1.0
fprA 3474130 c.124_126delTTGinsCTC synonymous_variant 1.0
fprA 3474135 c.129G>C synonymous_variant 1.0
fprA 3474138 c.132T>C synonymous_variant 1.0
fprA 3474141 c.135C>G synonymous_variant 1.0
fprA 3474162 c.156G>C synonymous_variant 1.0
fprA 3474171 c.165G>C synonymous_variant 1.0
fprA 3474177 c.171C>T synonymous_variant 1.0
fprA 3474180 c.174C>G synonymous_variant 1.0
rpoA 3877553 p.Glu319Gln missense_variant 1.0
rpoA 3877571 p.Pro313Ala missense_variant 1.0
rpoA 3877587 c.921A>G synonymous_variant 1.0
rpoA 3877613 p.Ile299Val missense_variant 1.0
rpoA 3877656 c.852T>G synonymous_variant 1.0
rpoA 3877668 c.840A>G synonymous_variant 1.0
rpoA 3877679 p.Ala277Ser missense_variant 1.0
rpoA 3877686 c.822A>G synonymous_variant 1.0
rpoA 3877692 c.816G>C synonymous_variant 1.0
rpoA 3877776 c.732T>C synonymous_variant 1.0
rpoA 3877782 c.726T>C synonymous_variant 1.0
rpoA 3877791 c.717C>G synonymous_variant 1.0
rpoA 3877818 c.690A>G synonymous_variant 1.0
rpoA 3877839 c.669G>C synonymous_variant 1.0
rpoA 3877857 c.651G>A synonymous_variant 1.0
rpoA 3877866 c.642G>C synonymous_variant 1.0
rpoA 3877875 c.633T>G synonymous_variant 1.0
rpoA 3877878 c.630G>C synonymous_variant 1.0
rpoA 3877890 c.618C>T synonymous_variant 1.0
clpC1 4038302 c.2403C>G synonymous_variant 1.0
clpC1 4038308 c.2397G>T synonymous_variant 1.0
clpC1 4038314 c.2391T>C synonymous_variant 1.0
clpC1 4038317 c.2388G>C synonymous_variant 1.0
clpC1 4038320 c.2385G>C synonymous_variant 1.0
clpC1 4038356 c.2349T>C synonymous_variant 1.0
clpC1 4038419 c.2286T>C synonymous_variant 1.0
clpC1 4038433 c.2272C>T synonymous_variant 1.0
clpC1 4038434 c.2271G>A synonymous_variant 1.0
clpC1 4038444 p.Ala754Lys missense_variant 1.0
clpC1 4038446 c.2259T>C synonymous_variant 1.0
clpC1 4038456 p.Val750Glu missense_variant 1.0
clpC1 4038460 p.Leu749Met missense_variant 1.0
clpC1 4038486 p.Gly740Asn missense_variant 1.0
clpC1 4038489 p.Ala739Gly missense_variant 1.0
clpC1 4038494 c.2211G>C synonymous_variant 1.0
clpC1 4038497 p.Ser736Gln missense_variant 1.0
clpC1 4038530 p.Glu725Asp missense_variant 1.0
clpC1 4038596 c.2109A>G synonymous_variant 1.0
clpC1 4038623 c.2082A>G synonymous_variant 1.0
clpC1 4038640 p.Asp689Asn missense_variant 1.0
clpC1 4038653 c.2052C>T synonymous_variant 1.0
clpC1 4038658 p.Lys683Gln missense_variant 1.0
clpC1 4038661 p.Ser682Thr missense_variant 1.0
clpC1 4038662 c.2043T>C synonymous_variant 1.0
clpC1 4038671 c.2034T>C synonymous_variant 1.0
clpC1 4038683 c.2022T>C synonymous_variant 1.0
clpC1 4038695 c.2010C>G synonymous_variant 1.0
clpC1 4038701 c.2004G>C synonymous_variant 1.0
clpC1 4038704 c.2001T>C synonymous_variant 1.0
clpC1 4038707 c.1998C>G synonymous_variant 1.0
clpC1 4038710 c.1995G>C synonymous_variant 1.0
clpC1 4038713 c.1992T>C synonymous_variant 1.0
clpC1 4038749 c.1956C>G synonymous_variant 1.0
clpC1 4038755 c.1950G>T synonymous_variant 1.0
clpC1 4038770 c.1935C>T synonymous_variant 1.0
clpC1 4038773 c.1932T>C synonymous_variant 1.0
clpC1 4038782 c.1923G>C synonymous_variant 1.0
clpC1 4038812 c.1893T>C synonymous_variant 1.0
clpC1 4038845 c.1860G>C synonymous_variant 1.0
clpC1 4038860 c.1845G>C synonymous_variant 1.0
clpC1 4038878 c.1827A>G synonymous_variant 1.0
clpC1 4038908 c.1797C>G synonymous_variant 1.0
clpC1 4038914 c.1791G>C synonymous_variant 1.0
clpC1 4038923 c.1780_1782delCTAinsTTG synonymous_variant 1.0
clpC1 4038953 c.1752A>G synonymous_variant 1.0
clpC1 4038956 c.1749T>C synonymous_variant 1.0
clpC1 4038965 c.1740T>C synonymous_variant 1.0
clpC1 4038971 c.1734T>C synonymous_variant 1.0
clpC1 4038974 c.1731T>C synonymous_variant 1.0
clpC1 4038989 c.1716T>C synonymous_variant 1.0
clpC1 4038997 c.1708T>C synonymous_variant 1.0
clpC1 4039004 c.1701C>G synonymous_variant 1.0
clpC1 4039112 c.1593C>G synonymous_variant 1.0
clpC1 4039121 c.1584T>C synonymous_variant 1.0
clpC1 4039142 c.1563A>G synonymous_variant 1.0
clpC1 4039145 c.1560G>C synonymous_variant 1.0
clpC1 4039169 p.Glu512Asp missense_variant 1.0
clpC1 4039172 c.1533A>G synonymous_variant 1.0
clpC1 4039178 c.1527G>C synonymous_variant 1.0
clpC1 4039183 c.1522T>C synonymous_variant 1.0
clpC1 4039186 c.1519C>T synonymous_variant 1.0
clpC1 4039226 c.1479T>C synonymous_variant 1.0
clpC1 4039274 c.1431G>C synonymous_variant 1.0
clpC1 4039286 c.1419T>C synonymous_variant 1.0
clpC1 4039295 c.1410A>C synonymous_variant 1.0
clpC1 4039298 c.1407T>C synonymous_variant 1.0
clpC1 4039319 c.1386T>C synonymous_variant 1.0
clpC1 4039322 c.1383T>C synonymous_variant 1.0
clpC1 4039328 c.1377A>C synonymous_variant 1.0
clpC1 4039331 c.1374C>G synonymous_variant 1.0
clpC1 4039337 p.Thr456Gln missense_variant 1.0
clpC1 4039349 c.1356C>T synonymous_variant 1.0
clpC1 4039352 c.1353C>G synonymous_variant 1.0
clpC1 4039364 c.1341C>G synonymous_variant 1.0
clpC1 4039391 c.1314T>G synonymous_variant 1.0
clpC1 4039409 c.1296T>C synonymous_variant 1.0
clpC1 4039412 c.1293T>G synonymous_variant 1.0
clpC1 4039415 p.Glu430Asp missense_variant 1.0
clpC1 4039430 c.1275T>C synonymous_variant 1.0
clpC1 4039442 c.1263A>G synonymous_variant 1.0
clpC1 4039517 c.1188C>G synonymous_variant 1.0
clpC1 4039556 c.1149G>C synonymous_variant 1.0
clpC1 4039559 c.1146C>G synonymous_variant 1.0
clpC1 4039562 c.1143C>G synonymous_variant 1.0
clpC1 4039565 c.1140G>C synonymous_variant 1.0
clpC1 4039570 p.Met379Leu missense_variant 1.0
clpC1 4039576 p.Ala377Pro missense_variant 1.0
clpC1 4039577 c.1128T>C synonymous_variant 1.0
clpC1 4039589 c.1116G>C synonymous_variant 1.0
clpC1 4039610 c.1095G>C synonymous_variant 1.0
clpC1 4039616 c.1089G>C synonymous_variant 1.0
clpC1 4039817 c.888A>C synonymous_variant 1.0
clpC1 4039820 c.885T>G synonymous_variant 1.0
clpC1 4039826 c.879C>G synonymous_variant 1.0
clpC1 4039831 c.874T>C synonymous_variant 1.0
clpC1 4039850 c.855T>C synonymous_variant 1.0
clpC1 4039865 c.840T>C synonymous_variant 1.0
clpC1 4039898 c.807C>G synonymous_variant 1.0
clpC1 4039928 c.775_777delAGCinsTCG synonymous_variant 1.0
clpC1 4039931 c.774T>C synonymous_variant 1.0
clpC1 4039937 c.768G>C synonymous_variant 1.0
clpC1 4039946 c.759A>C synonymous_variant 1.0
clpC1 4039952 c.753T>C synonymous_variant 1.0
clpC1 4039982 c.723G>A synonymous_variant 1.0
clpC1 4039988 c.717C>G synonymous_variant 1.0
clpC1 4039991 c.714G>C synonymous_variant 1.0
clpC1 4040021 c.684A>C synonymous_variant 1.0
clpC1 4040024 c.681A>G synonymous_variant 1.0
clpC1 4040033 c.672G>C synonymous_variant 1.0
clpC1 4040036 c.669C>G synonymous_variant 1.0
embC 4241047 c.1185C>G synonymous_variant 1.0
embC 4241050 c.1188T>G synonymous_variant 1.0
embC 4241053 c.1191G>C synonymous_variant 1.0
embC 4241394 p.Lys511Ser missense_variant 1.0
embC 4241479 c.1617C>G synonymous_variant 1.0
embC 4241480 c.1618T>C synonymous_variant 1.0
embC 4241488 c.1626G>C synonymous_variant 1.0
embC 4241496 p.Ala545Gly missense_variant 1.0
embC 4241500 c.1638A>C synonymous_variant 1.0
embC 4241501 p.Ser547Thr missense_variant 1.0
embC 4241506 c.1644G>C synonymous_variant 1.0
embC 4241518 c.1656A>G synonymous_variant 1.0
embC 4241521 c.1659T>C synonymous_variant 1.0
embC 4241530 c.1668C>G synonymous_variant 1.0
embC 4241536 c.1674A>G synonymous_variant 1.0
embC 4241539 c.1677T>C synonymous_variant 1.0
embC 4241545 c.1683T>C synonymous_variant 1.0
embC 4241548 c.1686T>C synonymous_variant 1.0
embC 4241551 c.1689A>G synonymous_variant 1.0
embC 4242764 p.Val968Leu missense_variant 0.67
embA 4242772 c.-461G>C upstream_gene_variant 0.75
embC 4242779 p.Asn973Asp missense_variant 0.75
embC 4242791 p.Ala977Ser missense_variant 1.0
embA 4242796 c.-437G>C upstream_gene_variant 1.0
embA 4242799 c.-434T>C upstream_gene_variant 1.0
embA 4242802 c.-431G>C upstream_gene_variant 1.0
embA 4242820 c.-413G>C upstream_gene_variant 1.0
embA 4242823 c.-410G>C upstream_gene_variant 1.0
embA 4242832 c.-401A>C upstream_gene_variant 1.0
embA 4242838 c.-395C>G upstream_gene_variant 1.0
embA 4242841 c.-392C>T upstream_gene_variant 1.0
embA 4242844 c.-389A>G upstream_gene_variant 1.0
embA 4242847 c.-386C>A upstream_gene_variant 1.0
embA 4242859 c.-374C>T upstream_gene_variant 1.0
embA 4242862 c.-371A>G upstream_gene_variant 1.0
embC 4242863 p.Tyr1001Asn missense_variant 1.0
embA 4242883 c.-350C>G upstream_gene_variant 1.0
embA 4244582 c.1350T>C synonymous_variant 0.75
embA 4244585 c.1353A>G synonymous_variant 0.75
embA 4244611 p.Ala460Gly missense_variant 0.75
embA 4244616 p.Ala462Ser missense_variant 0.75
embA 4244619 c.1387_1389delTTGinsCTC synonymous_variant 0.75
embA 4244625 p.Leu465Val missense_variant 0.75
embA 4244631 p.Thr467Leu missense_variant 0.75
embA 4244645 c.1413T>C synonymous_variant 1.0
embA 4244648 c.1416G>C synonymous_variant 1.0
embA 4244649 p.Asp473Ser missense_variant 1.0
embA 4244670 p.Ala480Leu missense_variant 1.0
embA 4244675 c.1443A>G synonymous_variant 1.0
embA 4244678 c.1446G>C synonymous_variant 1.0
embA 4244681 c.1449A>C synonymous_variant 1.0
embA 4244690 c.1458G>A synonymous_variant 1.0
embA 4244702 c.1470C>G synonymous_variant 1.0
embA 4244708 c.1476C>G synonymous_variant 1.0
embA 4245089 c.1857G>C synonymous_variant 1.0
embA 4245101 c.1869G>C synonymous_variant 1.0
embA 4245137 c.1905T>C synonymous_variant 1.0
embA 4245146 c.1914G>A synonymous_variant 1.0
embA 4245149 c.1917C>G synonymous_variant 1.0
embA 4245153 p.Ile641Val missense_variant 1.0
embA 4245182 c.1950T>C synonymous_variant 1.0
embA 4245189 c.1957C>T synonymous_variant 1.0
embA 4245198 p.Leu656Ile missense_variant 1.0
embA 4245207 c.1975T>C synonymous_variant 1.0
embA 4245215 c.1983A>C synonymous_variant 1.0
embA 4245222 p.Tyr664Gln missense_variant 1.0
embA 4245248 c.2016G>C synonymous_variant 1.0
embA 4245257 c.2025A>G synonymous_variant 1.0
embA 4245263 c.2031A>G synonymous_variant 1.0
embA 4245282 p.Ile684Val missense_variant 1.0
embA 4245285 c.2053T>C synonymous_variant 1.0
embA 4245290 c.2058C>G synonymous_variant 1.0
embA 4245293 c.2061T>G synonymous_variant 1.0
embA 4245296 c.2064G>C synonymous_variant 1.0
embA 4245299 c.2067A>G synonymous_variant 1.0
embA 4245315 p.Val695Thr missense_variant 1.0
embA 4245328 p.Ala699Val missense_variant 1.0
embA 4245335 c.2103A>G synonymous_variant 0.8
embA 4245340 p.Gly703Ala missense_variant 0.8
embA 4245345 p.Met705Leu missense_variant 0.8
embA 4245348 p.Ala706Thr missense_variant 0.8
embA 4245355 p.Ala708Gly missense_variant 0.8
embA 4245368 c.2136T>C synonymous_variant 0.75
embA 4245377 c.2145T>C synonymous_variant 0.67
embB 4245659 c.-855C>G upstream_gene_variant 1.0
embB 4245674 c.-840A>C upstream_gene_variant 1.0
embB 4245677 c.-837G>C upstream_gene_variant 1.0
embA 4245693 p.Ile821Val missense_variant 1.0
embB 4245701 c.-813G>C upstream_gene_variant 1.0
embB 4245704 c.-810G>C upstream_gene_variant 1.0
embB 4245725 c.-789A>G upstream_gene_variant 1.0
embB 4245726 c.-788T>C upstream_gene_variant 1.0
embB 4245737 c.-777A>C upstream_gene_variant 1.0
embB 4245740 c.-774T>C upstream_gene_variant 1.0
embB 4247491 c.978G>C synonymous_variant 1.0
embB 4247497 c.984T>C synonymous_variant 1.0
embB 4247512 c.999T>C synonymous_variant 1.0
embB 4247539 c.1026T>C synonymous_variant 1.0
embB 4247554 c.1041T>C synonymous_variant 1.0
embB 4247566 c.1053C>A synonymous_variant 1.0
embB 4247572 c.1059A>G synonymous_variant 1.0
embB 4247579 p.Ala356Phe missense_variant 1.0
embB 4247587 c.1074G>A synonymous_variant 1.0
embB 4247603 c.1090C>T synonymous_variant 1.0
embB 4247611 c.1098G>T synonymous_variant 1.0
embB 4247614 c.1101T>C synonymous_variant 1.0
embB 4247746 c.1233C>T synonymous_variant 1.0
embB 4247761 c.1248T>C synonymous_variant 1.0
embB 4247773 c.1260G>A synonymous_variant 1.0
embB 4247776 c.1263G>T synonymous_variant 1.0
embB 4247797 c.1284C>G synonymous_variant 1.0
embB 4247800 c.1287A>T synonymous_variant 1.0
embB 4247803 c.1290G>C synonymous_variant 1.0
embB 4247815 c.1302C>G synonymous_variant 1.0
embB 4247819 p.Val436Ile missense_variant 1.0
embB 4247830 c.1317A>G synonymous_variant 1.0
embB 4247836 c.1323A>G synonymous_variant 1.0
embB 4247839 c.1326G>C synonymous_variant 1.0
embB 4247866 c.1353G>C synonymous_variant 1.0
embB 4247875 c.1362G>C synonymous_variant 1.0
embB 4247876 c.1363C>T synonymous_variant 1.0
embB 4247881 c.1368G>C synonymous_variant 1.0
embB 4247887 c.1374C>T synonymous_variant 1.0
embB 4247893 c.1380C>T synonymous_variant 1.0
embB 4247932 c.1419C>G synonymous_variant 1.0
embB 4247940 p.Leu476Trp missense_variant 1.0
embB 4247945 c.1432T>C synonymous_variant 1.0
embB 4247951 p.Ser480Ala missense_variant 1.0
embB 4247956 c.1443G>C synonymous_variant 1.0
embB 4247974 c.1461C>G synonymous_variant 1.0
embB 4248007 c.1494C>G synonymous_variant 1.0
embB 4248011 p.Ser500Arg missense_variant 1.0
embB 4248014 p.Thr501Ala missense_variant 1.0
embB 4248035 p.Val508Ile missense_variant 1.0
embB 4248040 c.1527C>G synonymous_variant 1.0
embB 4248041 p.Ala510Thr missense_variant 1.0
embB 4248044 p.Lys511Ala missense_variant 1.0
embB 4248070 c.1557T>C synonymous_variant 1.0
embB 4248085 c.1572T>C synonymous_variant 1.0
embB 4248097 c.1584C>G synonymous_variant 1.0
embB 4248130 c.1617G>C synonymous_variant 1.0
embB 4248142 c.1629T>C synonymous_variant 1.0
embB 4248143 c.1630T>C synonymous_variant 1.0
embB 4248157 c.1644A>G synonymous_variant 1.0
embB 4248172 c.1659G>C synonymous_variant 1.0
embB 4248199 c.1686A>G synonymous_variant 1.0
embB 4248200 p.Ile563Val missense_variant 1.0
embB 4248205 c.1692C>G synonymous_variant 1.0
embB 4248206 p.Ser565Gly missense_variant 1.0
embB 4248220 c.1707A>C synonymous_variant 1.0