Run ID: ERR4820398
Sample name:
Date: 01-04-2023 16:39:42
Number of reads: 1825254
Percentage reads mapped: 99.94
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrl | 1476453 | n.2796C>T | non_coding_transcript_exon_variant | 0.2 |
fbiD | 3339406 | p.Thr97Ala | missense_variant | 0.12 |
embC | 4241081 | p.Leu407Met | missense_variant | 0.11 |
aftB | 4268583 | p.Ala85Gly | missense_variant | 0.1 |