Run ID: ERR4820841
Sample name:
Date: 01-04-2023 16:54:46
Number of reads: 2505681
Percentage reads mapped: 99.95
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrs | 1472102 | n.257G>T | non_coding_transcript_exon_variant | 0.22 |
rrs | 1472607 | n.762G>A | non_coding_transcript_exon_variant | 0.33 |
rrs | 1473059 | n.1214G>T | non_coding_transcript_exon_variant | 0.14 |
rrl | 1476534 | n.2877A>G | non_coding_transcript_exon_variant | 0.17 |