Run ID: ERR4821158
Sample name:
Date: 01-04-2023 17:05:34
Number of reads: 731
Percentage reads mapped: 70.02
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
clpC1 | 4039607 | c.1098C>T | synonymous_variant | 1.0 |
clpC1 | 4039610 | c.1095G>C | synonymous_variant | 1.0 |
clpC1 | 4039616 | c.1089G>C | synonymous_variant | 1.0 |
clpC1 | 4039622 | c.1083C>T | synonymous_variant | 1.0 |
clpC1 | 4039649 | c.1056G>C | synonymous_variant | 1.0 |
clpC1 | 4039652 | c.1053G>C | synonymous_variant | 1.0 |
clpC1 | 4039694 | c.1011G>C | synonymous_variant | 1.0 |
clpC1 | 4039724 | c.981A>G | synonymous_variant | 1.0 |