Run ID: ERR4821254
Sample name:
Date: 01-04-2023 17:08:58
Number of reads: 911
Percentage reads mapped: 26.81
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rpoC | 764339 | p.Leu324Ile | missense_variant | 1.0 |
rpoC | 764359 | c.990C>G | synonymous_variant | 1.0 |
rpoC | 764371 | c.1002G>C | synonymous_variant | 1.0 |
rpoC | 764377 | c.1008C>G | synonymous_variant | 1.0 |
rpoC | 764380 | c.1011G>C | synonymous_variant | 1.0 |
rpoC | 764387 | c.1018T>C | synonymous_variant | 1.0 |