Run ID: ERR4821737
Sample name:
Date: 01-04-2023 17:25:42
Number of reads: 3099735
Percentage reads mapped: 99.91
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
fbiC | 1304845 | p.Ala639Ser | missense_variant | 0.17 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
rrl | 1473923 | n.266C>A | non_coding_transcript_exon_variant | 0.14 |
rrl | 1474059 | n.402C>A | non_coding_transcript_exon_variant | 0.17 |
rrl | 1475151 | n.1494C>A | non_coding_transcript_exon_variant | 0.33 |