Run ID: ERR4821990
Sample name:
Date: 01-04-2023 17:34:18
Number of reads: 16389
Percentage reads mapped: 99.42
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
mmpL5 | 776100 | p.Thr794Ile | missense_variant | 1.0 |
PPE35 | 2168117 | c.2496C>T | synonymous_variant | 1.0 |
Rv3083 | 3448843 | p.Cys114Arg | missense_variant | 1.0 |
panD | 4043898 | c.384G>A | synonymous_variant | 0.67 |