Run ID: ERR8025351
Sample name:
Date: 02-04-2023 07:23:21
Number of reads: 5682721
Percentage reads mapped: 99.89
Strain: lineage4.9
Drug-resistance: Sensitive
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|---|---|---|---|
lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
mshA | 576108 | p.Ala254Gly | missense_variant | 0.35 |
mshA | 576111 | p.Ala255Gly | missense_variant | 0.16 |
rrs | 1471659 | n.-187C>T | upstream_gene_variant | 1.0 |
ddn | 3987157 | p.Glu105Ala | missense_variant | 0.15 |