Run ID: SRR5485457
Sample name:
Date: 18-08-2022 08:30:46
Number of reads: 69094
Percentage reads mapped: 73.43
Strain:
Drug-resistance: HR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpsL | 781687 | p.Lys43Arg | missense_variant | 1.0 | streptomycin |
katG | 2155168 | p.Ser315Thr | missense_variant | 1.0 | isoniazid |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rrs | 1472493 | n.648T>G | non_coding_transcript_exon_variant | 0.23 |
embB | 4247487 | p.Ser325Asn | missense_variant | 0.14 |
embB | 4247491 | c.978G>A | synonymous_variant | 0.14 |