Run ID: SRR5485458
Sample name:
Date: 18-08-2022 08:30:46
Number of reads: 104718
Percentage reads mapped: 88.59
Strain:
Drug-resistance: RR-TB
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
rpoB | 761155 | p.Ser450Leu | missense_variant | 1.0 | rifampicin |
rpsL | 781687 | p.Lys43Arg | missense_variant | 0.85 | streptomycin |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rpoB | 761212 | p.Val469Gly | missense_variant | 0.17 |
rrs | 1472493 | n.648T>G | non_coding_transcript_exon_variant | 0.27 |
rrs | 1472624 | n.779T>G | non_coding_transcript_exon_variant | 0.13 |