Run ID: SRR5485480
Sample name:
Date: 18-08-2022 08:29:05
Number of reads: 35877
Percentage reads mapped: 84.07
Strain:
Drug-resistance: Other
Drug | Resistance | Supporting mutations |
---|
Lineage | Family | Main Spoligotype | RDs | Frequency |
---|
Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
---|---|---|---|---|---|
embB | 4247730 | p.Gly406Asp | missense_variant | 1.0 | ethambutol |
Gene | Chromosome position | Mutation | Type | Estimated fraction |
---|---|---|---|---|
rrs | 1472393 | n.548G>A | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472401 | n.556T>C | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472408 | n.563A>G | non_coding_transcript_exon_variant | 0.18 |
rrs | 1472431 | n.586G>T | non_coding_transcript_exon_variant | 0.17 |
rrs | 1472493 | n.648T>G | non_coding_transcript_exon_variant | 0.24 |
rrs | 1472496 | n.651T>C | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472518 | n.673G>T | non_coding_transcript_exon_variant | 0.15 |
rrs | 1472561 | n.716G>A | non_coding_transcript_exon_variant | 0.15 |
rrs | 1473375 | n.1530T>C | non_coding_transcript_exon_variant | 0.15 |
rrl | 1473429 | n.-229G>A | upstream_gene_variant | 0.15 |