Run ID: SRR6045450
Sample name:
Date: 04-04-2023 11:59:23
Number of reads: 23404
Percentage reads mapped: 1.45
Strain: lineage4.9
Drug-resistance: Other
| Drug | Resistance | Supporting mutations |
|---|
| Lineage | Family | Main Spoligotype | RDs | Frequency |
|---|---|---|---|---|
| lineage4 | Euro-American | LAM;T;S;X;H | None | 1.0 |
| lineage4.9 | Euro-American (H37Rv-like) | T1 | None | 1.0 |
| Gene | Chromosome position | Mutation | Type | Estimated fraction | Drugs |
|---|---|---|---|---|---|
| rrs | 1472733 | n.888G>A | non_coding_transcript_exon_variant | 1.0 | streptomycin |
| Gene | Chromosome position | Mutation | Type | Estimated fraction |
|---|---|---|---|---|
| gyrB | 6193 | c.954G>A | synonymous_variant | 1.0 |
| gyrB | 6196 | c.957C>G | synonymous_variant | 1.0 |
| gyrB | 6238 | c.999G>A | synonymous_variant | 1.0 |
| gyrB | 6242 | p.Arg335Lys | missense_variant | 1.0 |
| gyrB | 6250 | c.1011A>G | synonymous_variant | 1.0 |
| gyrB | 6253 | c.1014G>C | synonymous_variant | 1.0 |
| gyrB | 6259 | p.Asp340Glu | missense_variant | 1.0 |
| gyrB | 6266 | p.Pro343Ala | missense_variant | 1.0 |
| gyrB | 6277 | c.1038C>T | synonymous_variant | 1.0 |
| gyrB | 6280 | c.1041T>C | synonymous_variant | 1.0 |
| gyrB | 6286 | c.1047T>C | synonymous_variant | 1.0 |
| gyrB | 6289 | c.1050C>T | synonymous_variant | 1.0 |
| gyrB | 6292 | c.1053G>C | synonymous_variant | 1.0 |
| gyrB | 6295 | c.1056A>G | synonymous_variant | 1.0 |
| gyrA | 6307 | c.-995T>G | upstream_gene_variant | 1.0 |
| gyrA | 6310 | c.-992G>C | upstream_gene_variant | 1.0 |
| gyrA | 6841 | c.-461T>C | upstream_gene_variant | 1.0 |
| gyrA | 6856 | c.-446T>C | upstream_gene_variant | 1.0 |
| gyrA | 6859 | c.-443T>C | upstream_gene_variant | 1.0 |
| gyrA | 6862 | c.-440C>G | upstream_gene_variant | 1.0 |
| gyrA | 6898 | c.-404G>C | upstream_gene_variant | 1.0 |
| gyrA | 6919 | c.-383T>C | upstream_gene_variant | 1.0 |
| gyrA | 6922 | c.-380G>C | upstream_gene_variant | 1.0 |
| gyrA | 6925 | c.-377T>C | upstream_gene_variant | 1.0 |
| gyrA | 6926 | c.-376T>C | upstream_gene_variant | 1.0 |
| gyrA | 6931 | c.-371A>G | upstream_gene_variant | 1.0 |
| gyrA | 6934 | c.-368A>G | upstream_gene_variant | 1.0 |
| gyrA | 7457 | c.156T>C | synonymous_variant | 1.0 |
| gyrA | 7469 | c.168C>G | synonymous_variant | 1.0 |
| gyrA | 7475 | c.174A>C | synonymous_variant | 1.0 |
| gyrA | 7685 | c.384G>A | synonymous_variant | 1.0 |
| gyrA | 7688 | c.387C>T | synonymous_variant | 1.0 |
| gyrA | 7694 | c.393A>G | synonymous_variant | 1.0 |
| gyrA | 7706 | c.405C>T | synonymous_variant | 1.0 |
| gyrA | 7710 | c.409_411delTTGinsCTA | synonymous_variant | 1.0 |
| gyrA | 7715 | c.414G>C | synonymous_variant | 1.0 |
| gyrA | 7728 | c.427_429delAGGinsCGC | synonymous_variant | 1.0 |
| gyrA | 7763 | c.462T>G | synonymous_variant | 1.0 |
| gyrA | 7781 | c.480G>A | synonymous_variant | 1.0 |
| gyrA | 7784 | c.483A>G | synonymous_variant | 1.0 |
| gyrA | 7787 | c.486G>A | synonymous_variant | 1.0 |
| gyrA | 7796 | c.495G>A | synonymous_variant | 1.0 |
| gyrA | 7799 | c.498A>G | synonymous_variant | 1.0 |
| gyrA | 7821 | c.520C>T | synonymous_variant | 1.0 |
| gyrA | 7826 | c.525C>A | synonymous_variant | 1.0 |
| gyrA | 7829 | c.528C>T | synonymous_variant | 1.0 |
| gyrA | 7835 | c.534A>C | synonymous_variant | 1.0 |
| gyrA | 7859 | c.558A>G | synonymous_variant | 1.0 |
| gyrA | 7865 | c.564T>C | synonymous_variant | 1.0 |
| gyrA | 7874 | c.573G>A | synonymous_variant | 1.0 |
| gyrA | 7886 | c.585T>C | synonymous_variant | 1.0 |
| gyrA | 7892 | c.591G>C | synonymous_variant | 1.0 |
| gyrA | 7898 | p.Asp199Glu | missense_variant | 1.0 |
| gyrA | 7911 | p.Ala204Cys | missense_variant | 1.0 |
| gyrA | 7922 | c.621T>C | synonymous_variant | 1.0 |
| gyrA | 7942 | p.Glu214Ala | missense_variant | 1.0 |
| gyrA | 7946 | c.645C>A | synonymous_variant | 1.0 |
| gyrA | 7947 | c.646C>T | synonymous_variant | 1.0 |
| gyrA | 7955 | c.654G>C | synonymous_variant | 1.0 |
| gyrA | 7963 | p.Gly221Glu | missense_variant | 1.0 |
| gyrA | 7970 | c.669T>C | synonymous_variant | 1.0 |
| gyrA | 7973 | c.672A>G | synonymous_variant | 1.0 |
| gyrA | 8294 | c.993T>C | synonymous_variant | 1.0 |
| gyrA | 8318 | c.1017C>A | synonymous_variant | 1.0 |
| gyrA | 8321 | c.1020C>T | synonymous_variant | 1.0 |
| gyrA | 8324 | c.1023T>C | synonymous_variant | 1.0 |
| gyrA | 8339 | c.1038A>G | synonymous_variant | 1.0 |
| gyrA | 8340 | p.Ala347Ser | missense_variant | 1.0 |
| gyrA | 8357 | c.1056G>A | synonymous_variant | 1.0 |
| gyrA | 8372 | c.1071G>C | synonymous_variant | 1.0 |
| gyrA | 8375 | c.1074G>C | synonymous_variant | 1.0 |
| gyrA | 8876 | c.1575C>T | synonymous_variant | 1.0 |
| gyrA | 8903 | c.1602T>C | synonymous_variant | 1.0 |
| gyrA | 8912 | c.1611G>A | synonymous_variant | 1.0 |
| gyrA | 8915 | c.1614A>G | synonymous_variant | 1.0 |
| gyrA | 8924 | c.1623C>T | synonymous_variant | 1.0 |
| gyrA | 8930 | c.1629C>T | synonymous_variant | 1.0 |
| gyrA | 8939 | c.1638T>C | synonymous_variant | 1.0 |
| gyrA | 8942 | c.1641G>C | synonymous_variant | 1.0 |
| gyrA | 8945 | c.1644G>C | synonymous_variant | 1.0 |
| gyrA | 8946 | c.1645_1647delTTGinsCTC | synonymous_variant | 1.0 |
| gyrA | 8966 | c.1665C>G | synonymous_variant | 1.0 |
| gyrA | 8967 | p.Ala556Arg | missense_variant | 1.0 |
| gyrA | 8981 | c.1680G>C | synonymous_variant | 1.0 |
| fgd1 | 491259 | c.477T>G | synonymous_variant | 1.0 |
| fgd1 | 491280 | c.498C>A | synonymous_variant | 1.0 |
| fgd1 | 491283 | p.Asp167Glu | missense_variant | 1.0 |
| fgd1 | 491286 | c.504G>T | synonymous_variant | 1.0 |
| fgd1 | 491289 | c.507C>T | synonymous_variant | 1.0 |
| fgd1 | 491301 | c.519C>T | synonymous_variant | 1.0 |
| fgd1 | 491307 | c.525C>G | synonymous_variant | 1.0 |
| fgd1 | 491316 | c.534C>G | synonymous_variant | 1.0 |
| fgd1 | 491319 | c.537G>A | synonymous_variant | 1.0 |
| ccsA | 620187 | c.297C>G | synonymous_variant | 1.0 |
| ccsA | 620197 | p.Gln103Met | missense_variant | 1.0 |
| ccsA | 620226 | c.336G>A | synonymous_variant | 1.0 |
| ccsA | 620236 | c.346C>T | synonymous_variant | 1.0 |
| ccsA | 620245 | p.Leu119Met | missense_variant | 1.0 |
| ccsA | 620265 | c.375C>A | synonymous_variant | 1.0 |
| ccsA | 620274 | c.384G>A | synonymous_variant | 1.0 |
| ccsA | 620277 | c.387G>A | synonymous_variant | 1.0 |
| ccsA | 620280 | c.390C>T | synonymous_variant | 1.0 |
| ccsA | 620283 | c.393T>C | synonymous_variant | 1.0 |
| ccsA | 620284 | p.Ala132Pro | missense_variant | 1.0 |
| ccsA | 620288 | p.Arg133Gln | missense_variant | 1.0 |
| ccsA | 620295 | c.405G>T | synonymous_variant | 1.0 |
| ccsA | 620317 | p.Val143Leu | missense_variant | 1.0 |
| ccsA | 620658 | c.768C>A | synonymous_variant | 1.0 |
| ccsA | 620661 | c.771C>G | synonymous_variant | 1.0 |
| ccsA | 620676 | c.786C>T | synonymous_variant | 1.0 |
| ccsA | 620682 | c.792G>A | synonymous_variant | 1.0 |
| ccsA | 620691 | c.801G>T | synonymous_variant | 1.0 |
| ccsA | 620694 | c.804C>G | synonymous_variant | 1.0 |
| ccsA | 620697 | c.807C>T | synonymous_variant | 1.0 |
| ccsA | 620700 | c.810C>T | synonymous_variant | 1.0 |
| ccsA | 620712 | c.822G>A | synonymous_variant | 1.0 |
| ccsA | 620721 | c.831G>C | synonymous_variant | 1.0 |
| ccsA | 620727 | c.837G>A | synonymous_variant | 1.0 |
| ccsA | 620730 | c.840C>T | synonymous_variant | 1.0 |
| ccsA | 620745 | c.855G>A | synonymous_variant | 1.0 |
| ccsA | 620758 | c.868_870delCGCinsAGA | synonymous_variant | 1.0 |
| ccsA | 620766 | c.876C>G | synonymous_variant | 1.0 |
| ccsA | 620769 | c.879C>G | synonymous_variant | 1.0 |
| ccsA | 620778 | c.888T>C | synonymous_variant | 1.0 |
| ccsA | 620796 | c.906C>A | synonymous_variant | 1.0 |
| rpoB | 760424 | c.618C>G | synonymous_variant | 1.0 |
| rpoB | 760919 | c.1113C>G | synonymous_variant | 1.0 |
| rpoB | 760920 | c.1114C>T | synonymous_variant | 1.0 |
| rpoB | 760925 | c.1119T>C | synonymous_variant | 1.0 |
| rpoB | 760928 | c.1122G>C | synonymous_variant | 1.0 |
| rpoB | 760931 | c.1125C>G | synonymous_variant | 1.0 |
| rpoB | 760938 | c.1132C>T | synonymous_variant | 1.0 |
| rpoB | 760943 | c.1137C>T | synonymous_variant | 1.0 |
| rpoB | 760946 | c.1140A>G | synonymous_variant | 1.0 |
| rpoB | 760970 | c.1164G>C | synonymous_variant | 1.0 |
| rpoB | 760982 | c.1176G>C | synonymous_variant | 1.0 |
| rpoB | 760985 | c.1179G>C | synonymous_variant | 1.0 |
| rpoB | 760988 | c.1182C>G | synonymous_variant | 1.0 |
| rpoB | 760991 | c.1185G>C | synonymous_variant | 1.0 |
| rpoB | 761027 | c.1221A>G | synonymous_variant | 1.0 |
| rpoB | 761036 | c.1230G>C | synonymous_variant | 1.0 |
| rpoB | 761408 | c.1602G>C | synonymous_variant | 1.0 |
| rpoB | 761414 | c.1608A>G | synonymous_variant | 1.0 |
| rpoB | 761423 | c.1617T>C | synonymous_variant | 1.0 |
| rpoB | 761435 | c.1629T>C | synonymous_variant | 1.0 |
| rpoB | 761438 | c.1632G>C | synonymous_variant | 1.0 |
| rpoB | 761444 | c.1638T>A | synonymous_variant | 1.0 |
| rpoB | 761447 | c.1641C>G | synonymous_variant | 1.0 |
| rpoB | 761457 | p.Pro551Gly | missense_variant | 1.0 |
| rpoB | 761465 | c.1659G>C | synonymous_variant | 1.0 |
| rpoB | 761492 | c.1686G>C | synonymous_variant | 1.0 |
| rpoB | 761510 | c.1704T>C | synonymous_variant | 1.0 |
| rpoB | 761537 | c.1731C>G | synonymous_variant | 1.0 |
| rpoB | 761657 | c.1851C>A | synonymous_variant | 1.0 |
| rpoB | 761669 | c.1863C>T | synonymous_variant | 1.0 |
| rpoB | 761675 | c.1869G>T | synonymous_variant | 1.0 |
| rpoB | 761682 | c.1876C>T | synonymous_variant | 1.0 |
| rpoB | 761693 | c.1887G>C | synonymous_variant | 1.0 |
| rpoB | 761699 | c.1893C>T | synonymous_variant | 1.0 |
| rpoB | 761720 | c.1914C>A | synonymous_variant | 1.0 |
| rpoB | 761723 | c.1917A>G | synonymous_variant | 1.0 |
| rpoB | 761726 | c.1920A>G | synonymous_variant | 1.0 |
| rpoB | 761727 | p.Ser641Ala | missense_variant | 1.0 |
| rpoB | 761765 | c.1959T>C | synonymous_variant | 1.0 |
| rpoB | 761768 | c.1962G>C | synonymous_variant | 1.0 |
| rpoB | 761969 | c.2163G>A | synonymous_variant | 1.0 |
| rpoB | 761990 | c.2184G>C | synonymous_variant | 1.0 |
| rpoB | 761999 | c.2193G>C | synonymous_variant | 1.0 |
| rpoB | 762008 | c.2202C>G | synonymous_variant | 1.0 |
| rpoB | 762014 | c.2208C>T | synonymous_variant | 1.0 |
| rpoB | 762047 | c.2241G>A | synonymous_variant | 1.0 |
| rpoB | 762062 | c.2256T>C | synonymous_variant | 1.0 |
| rpoB | 762065 | c.2259T>C | synonymous_variant | 1.0 |
| rpoB | 762083 | c.2277T>C | synonymous_variant | 1.0 |
| rpoB | 762086 | c.2280G>C | synonymous_variant | 1.0 |
| rpoB | 762101 | c.2295C>G | synonymous_variant | 1.0 |
| rpoB | 762143 | c.2337T>C | synonymous_variant | 1.0 |
| rpoB | 762149 | c.2343G>T | synonymous_variant | 1.0 |
| rpoB | 762167 | c.2361T>C | synonymous_variant | 1.0 |
| rpoB | 762185 | c.2379G>C | synonymous_variant | 1.0 |
| rpoB | 762206 | c.2400C>G | synonymous_variant | 1.0 |
| rpoB | 762212 | c.2406G>C | synonymous_variant | 1.0 |
| rpoB | 762233 | c.2427G>C | synonymous_variant | 1.0 |
| rpoB | 762246 | c.2440C>T | synonymous_variant | 1.0 |
| rpoB | 762781 | p.Gly992Asp | missense_variant | 1.0 |
| rpoC | 762785 | c.-585C>T | upstream_gene_variant | 1.0 |
| rpoB | 762789 | p.Leu995Met | missense_variant | 1.0 |
| rpoB | 762813 | p.Met1003Val | missense_variant | 1.0 |
| rpoC | 762818 | c.-552C>G | upstream_gene_variant | 1.0 |
| rpoC | 762827 | c.-543G>C | upstream_gene_variant | 1.0 |
| rpoC | 762836 | c.-534C>T | upstream_gene_variant | 1.0 |
| rpoC | 762857 | c.-513C>G | upstream_gene_variant | 1.0 |
| rpoC | 762917 | c.-453C>T | upstream_gene_variant | 1.0 |
| rpoC | 762957 | c.-413C>T | upstream_gene_variant | 1.0 |
| rpoC | 762962 | c.-408C>T | upstream_gene_variant | 1.0 |
| rpoC | 762971 | c.-399G>C | upstream_gene_variant | 1.0 |
| rpoC | 762995 | c.-375G>T | upstream_gene_variant | 1.0 |
| rpoC | 762998 | c.-372G>A | upstream_gene_variant | 1.0 |
| rpoC | 763022 | c.-348C>T | upstream_gene_variant | 1.0 |
| rpoC | 763028 | c.-342T>C | upstream_gene_variant | 1.0 |
| rpoC | 763031 | c.-339T>C | upstream_gene_variant | 1.0 |
| rpoC | 763034 | c.-336C>G | upstream_gene_variant | 1.0 |
| rpoC | 763040 | c.-330C>G | upstream_gene_variant | 1.0 |
| rpoC | 763053 | c.-317T>C | upstream_gene_variant | 1.0 |
| rpoC | 763070 | c.-300T>C | upstream_gene_variant | 1.0 |
| rpoC | 763115 | c.-255T>C | upstream_gene_variant | 1.0 |
| rpoC | 763238 | c.-132T>C | upstream_gene_variant | 1.0 |
| rpoC | 763247 | c.-123G>A | upstream_gene_variant | 1.0 |
| rpoC | 763468 | c.99G>C | synonymous_variant | 1.0 |
| rpoC | 763486 | c.117T>C | synonymous_variant | 1.0 |
| rpoC | 763492 | c.123G>A | synonymous_variant | 1.0 |
| rpoC | 763528 | c.159G>A | synonymous_variant | 1.0 |
| rpoC | 763531 | c.162G>T | synonymous_variant | 1.0 |
| rpoC | 763546 | c.177A>G | synonymous_variant | 1.0 |
| rpoC | 763573 | c.204G>T | synonymous_variant | 1.0 |
| rpoC | 763576 | c.207C>T | synonymous_variant | 1.0 |
| rpoC | 763594 | c.225C>T | synonymous_variant | 1.0 |
| rpoC | 763603 | c.234C>T | synonymous_variant | 1.0 |
| rpoC | 763996 | c.627T>C | synonymous_variant | 1.0 |
| rpoC | 764002 | c.633C>T | synonymous_variant | 1.0 |
| rpoC | 764005 | c.636G>C | synonymous_variant | 1.0 |
| rpoC | 764024 | c.655T>C | synonymous_variant | 1.0 |
| rpoC | 764040 | p.Ser224Thr | missense_variant | 1.0 |
| rpoC | 764044 | c.675T>C | synonymous_variant | 1.0 |
| rpoC | 764077 | c.708C>G | synonymous_variant | 1.0 |
| rpoC | 764083 | c.714A>G | synonymous_variant | 1.0 |
| rpoC | 764446 | c.1077T>C | synonymous_variant | 1.0 |
| rpoC | 764449 | c.1080G>C | synonymous_variant | 1.0 |
| rpoC | 764452 | c.1083T>C | synonymous_variant | 1.0 |
| rpoC | 764458 | c.1089G>C | synonymous_variant | 1.0 |
| rpoC | 764461 | c.1092A>G | synonymous_variant | 1.0 |
| rpoC | 764489 | c.1120C>T | synonymous_variant | 1.0 |
| rpoC | 764497 | c.1128A>G | synonymous_variant | 1.0 |
| rpoC | 764500 | c.1131C>G | synonymous_variant | 1.0 |
| rpoC | 764521 | c.1152T>C | synonymous_variant | 1.0 |
| rpoC | 764524 | c.1155C>A | synonymous_variant | 1.0 |
| rpoC | 764527 | c.1158C>T | synonymous_variant | 1.0 |
| rpoC | 764536 | c.1167G>C | synonymous_variant | 1.0 |
| rpoC | 764566 | c.1197C>G | synonymous_variant | 1.0 |
| rpoC | 764575 | c.1206T>G | synonymous_variant | 1.0 |
| rpoC | 764578 | c.1209C>G | synonymous_variant | 1.0 |
| rpoC | 764623 | c.1254C>A | synonymous_variant | 1.0 |
| rpoC | 764626 | c.1257C>T | synonymous_variant | 1.0 |
| rpoC | 764632 | c.1263T>C | synonymous_variant | 1.0 |
| rpoC | 764650 | c.1281G>T | synonymous_variant | 1.0 |
| rpoC | 765994 | c.2625A>T | synonymous_variant | 1.0 |
| rpoC | 766082 | p.Ala905Gln | missense_variant | 1.0 |
| rpoC | 766087 | c.2718C>G | synonymous_variant | 1.0 |
| rpoC | 766096 | c.2727G>T | synonymous_variant | 1.0 |
| rpoC | 766129 | c.2760C>G | synonymous_variant | 1.0 |
| rplC | 801222 | c.414T>C | synonymous_variant | 1.0 |
| rplC | 801276 | c.468G>T | synonymous_variant | 1.0 |
| rplC | 801282 | c.474G>C | synonymous_variant | 1.0 |
| rplC | 801307 | p.Ala167Ser | missense_variant | 1.0 |
| rplC | 801312 | c.504G>C | synonymous_variant | 1.0 |
| rplC | 801324 | c.516T>C | synonymous_variant | 1.0 |
| fbiC | 1304511 | c.1581C>T | synonymous_variant | 1.0 |
| fbiC | 1304515 | p.Ala529Thr | missense_variant | 1.0 |
| fbiC | 1304520 | c.1590A>G | synonymous_variant | 1.0 |
| fbiC | 1304526 | c.1596T>C | synonymous_variant | 1.0 |
| fbiC | 1304533 | c.1603T>C | synonymous_variant | 1.0 |
| fbiC | 1304544 | p.Asp538Glu | missense_variant | 1.0 |
| fbiC | 1304546 | p.Val539Ala | missense_variant | 1.0 |
| fbiC | 1304550 | c.1620C>G | synonymous_variant | 1.0 |
| fbiC | 1304580 | c.1650T>C | synonymous_variant | 1.0 |
| fbiC | 1304625 | c.1695C>T | synonymous_variant | 1.0 |
| fbiC | 1304628 | c.1698G>C | synonymous_variant | 1.0 |
| fbiC | 1304640 | c.1710A>C | synonymous_variant | 1.0 |
| fbiC | 1304658 | c.1728C>G | synonymous_variant | 1.0 |
| fbiC | 1304672 | p.Val581Ala | missense_variant | 1.0 |
| fbiC | 1304675 | p.Gly582Ala | missense_variant | 1.0 |
| fbiC | 1304684 | p.Ala585Gly | missense_variant | 1.0 |
| fbiC | 1304694 | c.1764A>G | synonymous_variant | 1.0 |
| fbiC | 1304703 | c.1773C>G | synonymous_variant | 1.0 |
| fbiC | 1304706 | c.1776C>T | synonymous_variant | 1.0 |
| fbiC | 1304715 | c.1785G>T | synonymous_variant | 1.0 |
| fbiC | 1304724 | c.1794A>G | synonymous_variant | 1.0 |
| fbiC | 1304727 | c.1797A>G | synonymous_variant | 1.0 |
| rrs | 1472655 | n.810G>A | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472658 | n.813G>A | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472661 | n.816A>G | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472690 | n.845C>A | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472697 | n.852T>C | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472713 | n.868T>C | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472716 | n.871C>T | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472742 | n.897C>T | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1472744 | n.899A>G | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1473163 | n.1318C>T | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473166 | n.1321G>A | non_coding_transcript_exon_variant | 1.0 |
| rrs | 1473177 | n.1332G>A | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473192 | n.1347A>G | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473193 | n.1348G>A | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473198 | n.1354delC | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473202 | n.1357C>T | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473204 | n.1359C>T | non_coding_transcript_exon_variant | 0.67 |
| rrs | 1473205 | n.1360T>C | non_coding_transcript_exon_variant | 0.67 |
| rrl | 1476332 | n.2675G>C | non_coding_transcript_exon_variant | 0.67 |
| rrl | 1476336 | n.2679C>T | non_coding_transcript_exon_variant | 0.6 |
| rrl | 1476338 | n.2681C>T | non_coding_transcript_exon_variant | 0.4 |
| rrl | 1476358 | n.2701T>C | non_coding_transcript_exon_variant | 0.67 |
| rrl | 1476359 | n.2702C>G | non_coding_transcript_exon_variant | 0.5 |
| rrl | 1476369 | n.2712C>T | non_coding_transcript_exon_variant | 1.0 |
| rrl | 1476408 | n.2751G>A | non_coding_transcript_exon_variant | 0.62 |
| rrl | 1476411 | n.2754G>A | non_coding_transcript_exon_variant | 0.62 |
| rrl | 1476425 | n.2768G>T | non_coding_transcript_exon_variant | 1.0 |
| rrl | 1476428 | n.2771C>T | non_coding_transcript_exon_variant | 1.0 |
| rrl | 1476429 | n.2772A>C | non_coding_transcript_exon_variant | 0.62 |
| rrl | 1476442 | n.2785T>A | non_coding_transcript_exon_variant | 0.62 |
| rrl | 1476443 | n.2786G>T | non_coding_transcript_exon_variant | 0.62 |
| rrl | 1476455 | n.2798C>A | non_coding_transcript_exon_variant | 0.83 |
| rrl | 1476456 | n.2799A>T | non_coding_transcript_exon_variant | 0.83 |
| rrl | 1476463 | n.2806C>T | non_coding_transcript_exon_variant | 0.8 |
| rrl | 1476466 | n.2809C>T | non_coding_transcript_exon_variant | 0.8 |
| rrl | 1476470 | n.2813C>T | non_coding_transcript_exon_variant | 0.4 |
| rrl | 1476483 | n.2826G>A | non_coding_transcript_exon_variant | 0.4 |
| inhA | 1674267 | c.66G>T | synonymous_variant | 1.0 |
| inhA | 1674270 | c.69T>C | synonymous_variant | 1.0 |
| inhA | 1674279 | c.78A>G | synonymous_variant | 1.0 |
| inhA | 1674285 | c.84A>G | synonymous_variant | 1.0 |
| inhA | 1674294 | c.93G>A | synonymous_variant | 1.0 |
| inhA | 1674421 | c.220T>C | synonymous_variant | 1.0 |
| inhA | 1674441 | c.240G>A | synonymous_variant | 1.0 |
| inhA | 1674443 | p.Ala81Val | missense_variant | 1.0 |
| inhA | 1674450 | c.249G>T | synonymous_variant | 1.0 |
| inhA | 1674452 | p.Ala84Glu | missense_variant | 1.0 |
| inhA | 1674465 | c.264C>G | synonymous_variant | 1.0 |
| inhA | 1674471 | c.270G>C | synonymous_variant | 1.0 |
| inhA | 1674480 | c.279T>C | synonymous_variant | 1.0 |
| inhA | 1674486 | c.285T>C | synonymous_variant | 1.0 |
| inhA | 1674489 | c.288G>C | synonymous_variant | 1.0 |
| inhA | 1674492 | c.291C>T | synonymous_variant | 1.0 |
| inhA | 1674507 | c.306G>C | synonymous_variant | 1.0 |
| inhA | 1674703 | c.502T>C | synonymous_variant | 1.0 |
| inhA | 1674714 | c.513C>G | synonymous_variant | 1.0 |
| inhA | 1674718 | c.517_519delAGGinsCGC | synonymous_variant | 1.0 |
| inhA | 1674729 | c.528G>A | synonymous_variant | 1.0 |
| inhA | 1674744 | c.543G>A | synonymous_variant | 1.0 |
| inhA | 1674756 | c.555T>C | synonymous_variant | 1.0 |
| inhA | 1674765 | c.564C>T | synonymous_variant | 1.0 |
| inhA | 1674777 | c.576C>A | synonymous_variant | 1.0 |
| inhA | 1674780 | c.579T>G | synonymous_variant | 1.0 |
| inhA | 1674852 | c.651G>A | synonymous_variant | 1.0 |
| inhA | 1674858 | c.657G>A | synonymous_variant | 1.0 |
| inhA | 1674883 | p.Ile228Val | missense_variant | 1.0 |
| inhA | 1674900 | c.699G>A | synonymous_variant | 1.0 |
| inhA | 1674903 | c.702T>C | synonymous_variant | 1.0 |
| inhA | 1674904 | p.Ala235Pro | missense_variant | 1.0 |
| inhA | 1674933 | c.732G>A | synonymous_variant | 1.0 |
| inhA | 1674939 | c.738G>T | synonymous_variant | 1.0 |
| inhA | 1674942 | c.741T>G | synonymous_variant | 1.0 |
| inhA | 1674957 | c.756G>C | synonymous_variant | 1.0 |
| inhA | 1674963 | c.762G>C | synonymous_variant | 1.0 |
| inhA | 1674966 | c.765T>C | synonymous_variant | 1.0 |
| inhA | 1674977 | p.Tyr259Phe | missense_variant | 1.0 |
| inhA | 1674993 | c.792G>A | synonymous_variant | 1.0 |
| rpsA | 1833979 | c.438T>C | synonymous_variant | 1.0 |
| rpsA | 1834021 | c.480C>T | synonymous_variant | 1.0 |
| rpsA | 1834030 | c.489C>G | synonymous_variant | 1.0 |
| rpsA | 1834528 | c.987T>C | synonymous_variant | 1.0 |
| rpsA | 1834546 | c.1005T>C | synonymous_variant | 1.0 |
| rpsA | 1834609 | c.1068T>C | synonymous_variant | 1.0 |
| rpsA | 1834612 | c.1071G>A | synonymous_variant | 1.0 |
| rpsA | 1834624 | c.1083G>A | synonymous_variant | 1.0 |
| rpsA | 1834633 | c.1092A>G | synonymous_variant | 1.0 |
| rpsA | 1834639 | c.1098T>C | synonymous_variant | 1.0 |
| rpsA | 1834657 | c.1116G>A | synonymous_variant | 1.0 |
| ndh | 2102233 | c.810G>A | synonymous_variant | 1.0 |
| ndh | 2102245 | p.Val266Glu | missense_variant | 1.0 |
| ndh | 2102257 | p.Ser262Ala | missense_variant | 1.0 |
| ndh | 2102264 | p.Lys260Arg | missense_variant | 1.0 |
| ndh | 2102269 | c.774C>G | synonymous_variant | 1.0 |
| ndh | 2102275 | c.768C>G | synonymous_variant | 1.0 |
| ndh | 2102305 | c.738T>C | synonymous_variant | 1.0 |
| ndh | 2102314 | c.729C>T | synonymous_variant | 1.0 |
| ndh | 2102317 | c.726A>G | synonymous_variant | 1.0 |
| ndh | 2102323 | c.720C>T | synonymous_variant | 1.0 |
| ndh | 2102332 | p.Gln237Lys | missense_variant | 1.0 |
| ndh | 2102337 | c.706T>C | synonymous_variant | 1.0 |
| ndh | 2102344 | c.699T>C | synonymous_variant | 1.0 |
| ndh | 2102350 | c.693G>T | synonymous_variant | 1.0 |
| ndh | 2102596 | c.447C>A | synonymous_variant | 1.0 |
| ndh | 2102605 | c.438G>A | synonymous_variant | 1.0 |
| ndh | 2102610 | c.433T>C | synonymous_variant | 1.0 |
| ndh | 2102635 | c.408C>G | synonymous_variant | 1.0 |
| ndh | 2102638 | c.405A>G | synonymous_variant | 1.0 |
| ndh | 2102641 | c.402C>T | synonymous_variant | 1.0 |
| ndh | 2102644 | c.399A>G | synonymous_variant | 1.0 |
| ndh | 2102659 | c.384C>T | synonymous_variant | 1.0 |
| ndh | 2102668 | c.375T>C | synonymous_variant | 1.0 |
| ndh | 2102671 | c.372T>C | synonymous_variant | 1.0 |
| ndh | 2102680 | c.363T>C | synonymous_variant | 1.0 |
| ndh | 2102683 | c.360T>C | synonymous_variant | 1.0 |
| ndh | 2102718 | p.Gln109Glu | missense_variant | 1.0 |
| ndh | 2102890 | c.153C>T | synonymous_variant | 1.0 |
| ndh | 2102911 | c.132G>C | synonymous_variant | 1.0 |
| ndh | 2102917 | c.126G>C | synonymous_variant | 1.0 |
| ndh | 2102929 | c.114T>C | synonymous_variant | 1.0 |
| ndh | 2102959 | c.84C>T | synonymous_variant | 1.0 |
| ndh | 2102962 | c.81A>C | synonymous_variant | 1.0 |
| ndh | 2102968 | c.75C>T | synonymous_variant | 1.0 |
| ndh | 2102977 | c.66T>G | synonymous_variant | 1.0 |
| ndh | 2102989 | c.54G>C | synonymous_variant | 1.0 |
| ndh | 2102992 | c.51T>C | synonymous_variant | 1.0 |
| ndh | 2103003 | c.40A>C | synonymous_variant | 1.0 |
| ndh | 2103007 | p.Pro12Arg | missense_variant | 1.0 |
| ndh | 2103015 | p.Gln10Glu | missense_variant | 1.0 |
| ndh | 2103016 | p.Ala9Val | missense_variant | 1.0 |
| Rv1979c | 2222739 | c.426C>A | synonymous_variant | 1.0 |
| Rv1979c | 2222757 | c.408G>C | synonymous_variant | 1.0 |
| Rv1979c | 2222765 | p.Phe134Leu | missense_variant | 1.0 |
| Rv1979c | 2222768 | p.Leu133Val | missense_variant | 1.0 |
| Rv1979c | 2222769 | p.Gln132His | missense_variant | 1.0 |
| Rv1979c | 2222772 | p.Glu131Asp | missense_variant | 1.0 |
| Rv1979c | 2222775 | p.Ala130Glu | missense_variant | 1.0 |
| Rv1979c | 2222787 | p.Ala126His | missense_variant | 1.0 |
| Rv1979c | 2222794 | p.Asp124Gly | missense_variant | 1.0 |
| Rv1979c | 2222804 | p.Ala121Thr | missense_variant | 1.0 |
| Rv1979c | 2222808 | c.357A>G | synonymous_variant | 1.0 |
| Rv1979c | 2222829 | p.Phe112Leu | missense_variant | 1.0 |
| Rv1979c | 2222835 | c.330T>G | synonymous_variant | 1.0 |
| Rv1979c | 2222840 | c.325T>C | synonymous_variant | 1.0 |
| Rv1979c | 2222844 | c.321G>A | synonymous_variant | 1.0 |
| kasA | 2518906 | c.792A>G | synonymous_variant | 1.0 |
| kasA | 2518910 | p.Leu266Met | missense_variant | 1.0 |
| kasA | 2518918 | c.804C>T | synonymous_variant | 1.0 |
| kasA | 2518924 | c.810C>T | synonymous_variant | 1.0 |
| kasA | 2518927 | c.813C>T | synonymous_variant | 1.0 |
| kasA | 2518939 | c.825T>C | synonymous_variant | 1.0 |
| kasA | 2518942 | c.828T>C | synonymous_variant | 1.0 |
| kasA | 2518963 | c.849T>C | synonymous_variant | 1.0 |
| kasA | 2518968 | p.Val285Ala | missense_variant | 1.0 |
| kasA | 2518972 | c.858T>G | synonymous_variant | 1.0 |
| kasA | 2518984 | c.870G>C | synonymous_variant | 1.0 |
| kasA | 2518990 | c.876T>A | synonymous_variant | 1.0 |
| kasA | 2518993 | c.879C>T | synonymous_variant | 1.0 |
| kasA | 2519003 | c.889C>T | synonymous_variant | 1.0 |
| kasA | 2519008 | c.894C>G | synonymous_variant | 1.0 |
| kasA | 2519015 | c.903_904delGC | frameshift_variant | 1.0 |
| kasA | 2519021 | p.Ala303Pro | missense_variant | 1.0 |
| kasA | 2519022 | c.908_909insAA | frameshift_variant | 1.0 |
| kasA | 2519027 | p.Ile305Val | missense_variant | 1.0 |
| pepQ | 2860293 | c.126A>G | synonymous_variant | 1.0 |
| pepQ | 2860302 | c.117C>A | synonymous_variant | 1.0 |
| pepQ | 2860305 | c.114G>A | synonymous_variant | 1.0 |
| pepQ | 2860308 | c.111C>T | synonymous_variant | 1.0 |
| pepQ | 2860314 | c.105C>T | synonymous_variant | 1.0 |
| pepQ | 2860317 | c.102A>C | synonymous_variant | 1.0 |
| pepQ | 2860332 | c.87C>T | synonymous_variant | 1.0 |
| pepQ | 2860344 | p.Ser25Thr | missense_variant | 1.0 |
| pepQ | 2860349 | p.Ile24Val | missense_variant | 1.0 |
| pepQ | 2860364 | c.55T>C | synonymous_variant | 1.0 |
| pepQ | 2860365 | c.54G>A | synonymous_variant | 1.0 |
| pepQ | 2860370 | p.Ser17Ala | missense_variant | 1.0 |
| pepQ | 2860371 | c.48C>A | synonymous_variant | 1.0 |
| pepQ | 2860374 | c.45T>C | synonymous_variant | 1.0 |
| pepQ | 2860377 | c.42C>T | synonymous_variant | 1.0 |
| pepQ | 2860383 | c.36A>C | synonymous_variant | 1.0 |
| pepQ | 2860387 | p.Lys11Arg | missense_variant | 1.0 |
| pepQ | 2860389 | c.30G>C | synonymous_variant | 1.0 |
| pepQ | 2860397 | p.Asp8His | missense_variant | 1.0 |
| Rv2752c | 3065979 | c.213T>C | synonymous_variant | 1.0 |
| Rv2752c | 3065985 | c.207C>T | synonymous_variant | 1.0 |
| Rv2752c | 3065993 | p.Val67Ile | missense_variant | 1.0 |
| Rv2752c | 3065994 | c.198T>C | synonymous_variant | 1.0 |
| Rv2752c | 3066000 | p.Met64Ile | missense_variant | 1.0 |
| Rv2752c | 3066003 | c.189C>T | synonymous_variant | 1.0 |
| thyX | 3067619 | c.327A>G | synonymous_variant | 1.0 |
| thyX | 3067622 | c.324C>T | synonymous_variant | 1.0 |
| thyX | 3067625 | c.321C>T | synonymous_variant | 1.0 |
| thyX | 3067631 | c.315C>G | synonymous_variant | 1.0 |
| thyX | 3067640 | c.306G>A | synonymous_variant | 1.0 |
| thyX | 3067655 | c.291G>C | synonymous_variant | 1.0 |
| thyX | 3067658 | c.288C>T | synonymous_variant | 1.0 |
| thyX | 3067661 | c.285C>G | synonymous_variant | 1.0 |
| thyX | 3067669 | c.277C>T | synonymous_variant | 1.0 |
| thyX | 3067673 | c.273C>T | synonymous_variant | 1.0 |
| thyX | 3067682 | c.264G>A | synonymous_variant | 1.0 |
| thyX | 3067694 | c.252G>C | synonymous_variant | 1.0 |
| thyX | 3067718 | c.228C>A | synonymous_variant | 1.0 |
| thyX | 3067721 | c.225T>C | synonymous_variant | 1.0 |
| thyX | 3067727 | c.219A>G | synonymous_variant | 1.0 |
| thyX | 3067736 | c.210C>T | synonymous_variant | 1.0 |
| thyX | 3067739 | c.207T>C | synonymous_variant | 1.0 |
| thyX | 3067761 | p.Arg62Lys | missense_variant | 1.0 |
| thyX | 3067765 | p.Leu61Ile | missense_variant | 1.0 |
| thyA | 3073836 | c.636C>T | synonymous_variant | 1.0 |
| thyA | 3073839 | c.633T>C | synonymous_variant | 1.0 |
| thyA | 3073860 | c.612C>G | synonymous_variant | 1.0 |
| thyA | 3073863 | c.609T>C | synonymous_variant | 1.0 |
| thyA | 3073866 | c.606C>G | synonymous_variant | 1.0 |
| thyA | 3073872 | p.Ile200Val | missense_variant | 1.0 |
| fprA | 3473843 | c.-164C>G | upstream_gene_variant | 1.0 |
| fprA | 3473848 | c.-159_-157delCAAinsAAG | upstream_gene_variant | 1.0 |
| fprA | 3473860 | c.-147G>A | upstream_gene_variant | 1.0 |
| fbiA | 3640347 | c.-196A>G | upstream_gene_variant | 1.0 |
| fbiA | 3640365 | c.-178C>G | upstream_gene_variant | 1.0 |
| fbiA | 3640377 | c.-166G>C | upstream_gene_variant | 1.0 |
| fbiB | 3641618 | p.Asp28Glu | missense_variant | 1.0 |
| fbiB | 3641621 | c.87G>C | synonymous_variant | 1.0 |
| fbiB | 3641622 | p.Ser30Gly | missense_variant | 1.0 |
| fbiB | 3641626 | p.Ala31Val | missense_variant | 1.0 |
| fbiB | 3641631 | p.Val33Ile | missense_variant | 1.0 |
| fbiB | 3641638 | p.Ala35Glu | missense_variant | 1.0 |
| fbiB | 3641654 | c.120A>G | synonymous_variant | 1.0 |
| fbiB | 3641663 | c.129T>C | synonymous_variant | 1.0 |
| fbiB | 3641666 | c.132C>T | synonymous_variant | 1.0 |
| fbiB | 3641678 | c.144T>C | synonymous_variant | 1.0 |
| fbiB | 3641681 | c.147C>G | synonymous_variant | 1.0 |
| fbiB | 3641699 | c.165A>G | synonymous_variant | 1.0 |
| fbiB | 3641717 | c.183T>G | synonymous_variant | 1.0 |
| fbiB | 3641720 | c.186G>C | synonymous_variant | 1.0 |
| ddn | 3986648 | c.-196C>G | upstream_gene_variant | 1.0 |
| clpC1 | 4038668 | c.2037G>C | synonymous_variant | 1.0 |
| clpC1 | 4038683 | c.2022T>C | synonymous_variant | 1.0 |
| clpC1 | 4038695 | c.2010C>G | synonymous_variant | 1.0 |
| clpC1 | 4038704 | c.2001T>C | synonymous_variant | 1.0 |
| clpC1 | 4038707 | c.1998C>G | synonymous_variant | 1.0 |
| clpC1 | 4038713 | c.1992T>C | synonymous_variant | 1.0 |
| clpC1 | 4038740 | c.1965G>C | synonymous_variant | 1.0 |
| clpC1 | 4038743 | c.1962G>T | synonymous_variant | 1.0 |
| clpC1 | 4038776 | c.1929G>A | synonymous_variant | 1.0 |
| clpC1 | 4038790 | c.1915C>T | synonymous_variant | 1.0 |
| clpC1 | 4038812 | c.1893T>C | synonymous_variant | 1.0 |
| clpC1 | 4038815 | c.1890G>A | synonymous_variant | 1.0 |
| clpC1 | 4038821 | c.1884G>A | synonymous_variant | 1.0 |
| clpC1 | 4038827 | c.1878G>A | synonymous_variant | 1.0 |
| clpC1 | 4038845 | c.1860G>C | synonymous_variant | 1.0 |
| clpC1 | 4038848 | c.1857C>T | synonymous_variant | 1.0 |
| clpC1 | 4038851 | c.1854G>A | synonymous_variant | 1.0 |
| clpC1 | 4038863 | c.1842G>C | synonymous_variant | 1.0 |
| clpC1 | 4038869 | c.1836G>A | synonymous_variant | 1.0 |
| clpC1 | 4038878 | c.1827A>G | synonymous_variant | 1.0 |
| clpC1 | 4038908 | c.1797C>T | synonymous_variant | 1.0 |
| clpC1 | 4038914 | c.1791G>T | synonymous_variant | 1.0 |
| clpC1 | 4038917 | c.1788C>T | synonymous_variant | 1.0 |
| clpC1 | 4038923 | c.1782A>G | synonymous_variant | 1.0 |
| clpC1 | 4038929 | c.1776G>A | synonymous_variant | 1.0 |
| clpC1 | 4038953 | c.1752A>G | synonymous_variant | 1.0 |
| clpC1 | 4038956 | c.1749T>C | synonymous_variant | 1.0 |
| clpC1 | 4038965 | c.1740T>C | synonymous_variant | 1.0 |
| clpC1 | 4038971 | c.1734T>C | synonymous_variant | 1.0 |
| clpC1 | 4038974 | c.1731T>C | synonymous_variant | 1.0 |
| clpC1 | 4038977 | c.1728G>C | synonymous_variant | 1.0 |
| clpC1 | 4038989 | c.1716T>C | synonymous_variant | 1.0 |
| clpC1 | 4038997 | c.1708T>C | synonymous_variant | 1.0 |
| clpC1 | 4039046 | c.1659C>T | synonymous_variant | 1.0 |
| clpC1 | 4039064 | c.1641C>T | synonymous_variant | 1.0 |
| clpC1 | 4039073 | c.1632C>G | synonymous_variant | 1.0 |
| clpC1 | 4039097 | c.1608G>C | synonymous_variant | 1.0 |
| clpC1 | 4039391 | c.1314T>G | synonymous_variant | 1.0 |
| clpC1 | 4039409 | c.1296T>C | synonymous_variant | 1.0 |
| clpC1 | 4039412 | c.1293T>G | synonymous_variant | 1.0 |
| clpC1 | 4039430 | c.1275T>C | synonymous_variant | 1.0 |
| clpC1 | 4039439 | c.1266C>T | synonymous_variant | 1.0 |
| clpC1 | 4039442 | c.1263A>C | synonymous_variant | 1.0 |
| clpC1 | 4039454 | c.1251A>G | synonymous_variant | 1.0 |
| clpC1 | 4039463 | c.1242C>G | synonymous_variant | 1.0 |
| clpC1 | 4039466 | c.1239T>C | synonymous_variant | 1.0 |
| clpC1 | 4039481 | c.1224T>C | synonymous_variant | 1.0 |
| clpC1 | 4039484 | c.1221T>C | synonymous_variant | 1.0 |
| clpC1 | 4039487 | c.1218G>C | synonymous_variant | 1.0 |
| clpC1 | 4039508 | c.1197G>A | synonymous_variant | 1.0 |
| clpC1 | 4039526 | c.1179G>C | synonymous_variant | 1.0 |
| clpC1 | 4039552 | c.1153C>T | synonymous_variant | 1.0 |
| clpC1 | 4039553 | c.1152C>T | synonymous_variant | 1.0 |
| clpC1 | 4039556 | c.1149G>C | synonymous_variant | 1.0 |
| clpC1 | 4039559 | c.1146C>A | synonymous_variant | 1.0 |
| clpC1 | 4039565 | c.1140G>C | synonymous_variant | 1.0 |
| clpC1 | 4039568 | p.Met379Ile | missense_variant | 1.0 |
| clpC1 | 4039574 | p.Ala377Ser | missense_variant | 1.0 |
| clpC1 | 4039577 | c.1128T>C | synonymous_variant | 1.0 |
| clpC1 | 4039581 | p.Thr375Ser | missense_variant | 1.0 |
| clpC1 | 4039589 | c.1116G>T | synonymous_variant | 1.0 |
| clpC1 | 4039601 | c.1104G>C | synonymous_variant | 1.0 |
| clpC1 | 4039610 | c.1095G>C | synonymous_variant | 1.0 |
| clpC1 | 4039616 | c.1089G>C | synonymous_variant | 1.0 |
| clpC1 | 4040411 | c.294T>C | synonymous_variant | 1.0 |
| clpC1 | 4040423 | c.282A>G | synonymous_variant | 1.0 |
| clpC1 | 4040431 | c.274T>C | synonymous_variant | 1.0 |
| clpC1 | 4040444 | c.261C>T | synonymous_variant | 1.0 |
| clpC1 | 4040450 | c.255A>G | synonymous_variant | 1.0 |
| clpC1 | 4040453 | c.252C>G | synonymous_variant | 1.0 |
| clpC1 | 4040459 | c.246C>G | synonymous_variant | 1.0 |
| clpC1 | 4040465 | c.240T>C | synonymous_variant | 1.0 |
| clpC1 | 4040471 | c.234T>C | synonymous_variant | 1.0 |
| clpC1 | 4040480 | c.225T>C | synonymous_variant | 1.0 |
| clpC1 | 4040495 | c.210C>T | synonymous_variant | 1.0 |
| clpC1 | 4040522 | c.183T>C | synonymous_variant | 1.0 |
| clpC1 | 4040531 | c.174T>C | synonymous_variant | 1.0 |
| embC | 4240979 | p.Thr373Gln | missense_variant | 1.0 |
| embC | 4240990 | c.1128A>C | synonymous_variant | 1.0 |
| embC | 4241005 | c.1143G>T | synonymous_variant | 1.0 |
| embC | 4241008 | c.1146G>C | synonymous_variant | 1.0 |
| embC | 4241023 | c.1161T>G | synonymous_variant | 1.0 |
| embC | 4241030 | c.1168C>T | synonymous_variant | 1.0 |
| embA | 4242832 | c.-401A>G | upstream_gene_variant | 1.0 |
| embA | 4242838 | c.-395C>G | upstream_gene_variant | 1.0 |
| embA | 4242844 | c.-389A>G | upstream_gene_variant | 1.0 |
| embA | 4242847 | c.-386C>A | upstream_gene_variant | 1.0 |
| embA | 4242859 | c.-374C>T | upstream_gene_variant | 1.0 |
| embC | 4242863 | p.Tyr1001Asn | missense_variant | 1.0 |
| embA | 4242877 | c.-356G>A | upstream_gene_variant | 1.0 |
| embA | 4242880 | c.-353A>C | upstream_gene_variant | 1.0 |
| embA | 4242883 | c.-350C>G | upstream_gene_variant | 1.0 |
| embA | 4242892 | c.-341G>C | upstream_gene_variant | 1.0 |
| embA | 4242901 | c.-332G>A | upstream_gene_variant | 1.0 |
| embA | 4242919 | c.-314A>G | upstream_gene_variant | 1.0 |
| embA | 4242940 | c.-293T>C | upstream_gene_variant | 1.0 |
| embC | 4242941 | p.His1027Asn | missense_variant | 1.0 |
| embA | 4242946 | c.-287T>C | upstream_gene_variant | 1.0 |
| embA | 4242964 | c.-269C>T | upstream_gene_variant | 1.0 |
| embC | 4242965 | p.Ile1035Val | missense_variant | 1.0 |
| embA | 4242973 | c.-260G>A | upstream_gene_variant | 1.0 |
| embC | 4242980 | p.Met1040Val | missense_variant | 1.0 |
| embC | 4242984 | p.Arg1041His | missense_variant | 1.0 |
| embA | 4242991 | c.-242C>G | upstream_gene_variant | 1.0 |
| embC | 4243014 | p.Asp1051Gly | missense_variant | 1.0 |
| embA | 4243024 | c.-209T>C | upstream_gene_variant | 1.0 |
| embA | 4243025 | c.-208A>C | upstream_gene_variant | 1.0 |
| embA | 4245149 | c.1917C>G | synonymous_variant | 1.0 |
| embA | 4245173 | c.1941G>C | synonymous_variant | 1.0 |
| embA | 4245174 | p.Ser648Thr | missense_variant | 1.0 |
| embA | 4245182 | c.1950T>C | synonymous_variant | 1.0 |
| embA | 4245187 | p.Thr652Met | missense_variant | 1.0 |
| embA | 4245198 | p.Leu656Val | missense_variant | 1.0 |
| embA | 4245218 | c.1986C>T | synonymous_variant | 1.0 |
| embA | 4245224 | c.1992T>C | synonymous_variant | 1.0 |
| embA | 4245248 | c.2016G>C | synonymous_variant | 1.0 |
| embA | 4245257 | c.2025A>G | synonymous_variant | 1.0 |
| embA | 4245263 | c.2031A>G | synonymous_variant | 1.0 |
| embA | 4245282 | p.Ile684Val | missense_variant | 1.0 |
| embA | 4245285 | c.2053T>C | synonymous_variant | 1.0 |
| embA | 4245290 | c.2058C>T | synonymous_variant | 1.0 |
| embA | 4245293 | c.2061T>C | synonymous_variant | 1.0 |
| embA | 4245296 | c.2064G>A | synonymous_variant | 1.0 |
| embA | 4245299 | c.2067A>G | synonymous_variant | 1.0 |
| embA | 4245305 | c.2073G>C | synonymous_variant | 1.0 |
| embB | 4248358 | c.1845C>G | synonymous_variant | 1.0 |
| embB | 4248397 | c.1884C>T | synonymous_variant | 1.0 |
| embB | 4248398 | c.1885C>T | synonymous_variant | 1.0 |
| embB | 4248407 | p.Leu632Val | missense_variant | 1.0 |
| aftB | 4269021 | c.-185C>G | upstream_gene_variant | 1.0 |
| aftB | 4269027 | c.-191C>A | upstream_gene_variant | 1.0 |
| aftB | 4269033 | c.-197T>C | upstream_gene_variant | 1.0 |
| aftB | 4269045 | c.-209G>C | upstream_gene_variant | 1.0 |
| aftB | 4269048 | c.-212C>T | upstream_gene_variant | 1.0 |
| aftB | 4269051 | c.-215C>T | upstream_gene_variant | 1.0 |
| aftB | 4269261 | c.-425G>A | upstream_gene_variant | 1.0 |
| ubiA | 4269314 | p.Lys174Gln | missense_variant | 1.0 |
| ubiA | 4269327 | p.Lys169Asp | missense_variant | 1.0 |
| ubiA | 4269337 | p.Val166Ala | missense_variant | 1.0 |
| aftB | 4269342 | c.-506G>C | upstream_gene_variant | 1.0 |
| aftB | 4269363 | c.-527T>C | upstream_gene_variant | 1.0 |
| ubiA | 4269380 | p.Val152Ile | missense_variant | 1.0 |
| ubiA | 4269387 | p.Glu149Asp | missense_variant | 1.0 |
| ubiA | 4269390 | p.Val148Ile | missense_variant | 1.0 |
| aftB | 4269405 | c.-569G>A | upstream_gene_variant | 1.0 |
| aftB | 4269411 | c.-575T>C | upstream_gene_variant | 1.0 |
| aftB | 4269414 | c.-578T>C | upstream_gene_variant | 1.0 |
| aftB | 4269420 | c.-584T>C | upstream_gene_variant | 1.0 |
| ubiA | 4269424 | p.Ala137Gly | missense_variant | 1.0 |
| aftB | 4269428 | c.-592T>C | upstream_gene_variant | 1.0 |
| ubiA | 4269449 | p.Val129Ile | missense_variant | 1.0 |
| whiB6 | 4338225 | c.297C>G | synonymous_variant | 1.0 |
| whiB6 | 4338228 | c.294G>C | synonymous_variant | 1.0 |
| whiB6 | 4338234 | c.288A>G | synonymous_variant | 1.0 |
| whiB6 | 4338240 | c.282G>A | synonymous_variant | 1.0 |
| whiB6 | 4338248 | c.274T>C | synonymous_variant | 1.0 |
| whiB6 | 4338270 | c.252A>T | synonymous_variant | 1.0 |
| whiB6 | 4338273 | p.Glu83Asp | missense_variant | 1.0 |
| whiB6 | 4338276 | c.246C>T | synonymous_variant | 1.0 |
| whiB6 | 4338282 | c.240A>C | synonymous_variant | 1.0 |
| whiB6 | 4338285 | c.237C>G | synonymous_variant | 1.0 |
| whiB6 | 4338291 | c.231A>C | synonymous_variant | 1.0 |
| whiB6 | 4338300 | c.222G>C | synonymous_variant | 1.0 |
| whiB6 | 4338306 | c.216G>C | synonymous_variant | 1.0 |
| whiB6 | 4338309 | p.Gly71Asn | missense_variant | 1.0 |
| whiB6 | 4338314 | p.Ala70Ser | missense_variant | 1.0 |
| whiB6 | 4338315 | c.207C>G | synonymous_variant | 1.0 |
| whiB6 | 4338333 | c.189A>C | synonymous_variant | 1.0 |
| whiB6 | 4338341 | p.Leu61Met | missense_variant | 1.0 |
