EBG00000313325 - n.-117delT
Drug resistance types
16 Sensitive
0 RR-TB
4 HR-TB
2 MDR-TB
4 Pre-XDR-TB
2 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 11 |
| lineage3 | 11 |
| lineage3.1.3 | 1 |
| lineage1.2.2.2 | 3 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 29 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR14519133 | Sensitive | lineage2.2.1 | None | SRR21001883 | XDR-TB | lineage2.2.1 | None | SRR28026768 | Sensitive | lineage3 | None | SRR11662504 | MDR-TB | lineage2.2.1 | None | SRR28467055 | HR-TB | lineage2.2.1 | None | SRR6045997 | Other | lineage3.1.3 | gb | SRR6046034 | Sensitive | lineage1.2.2.2 | gb | ERR13266453 | HR-TB | lineage3 | None | SRR5065554 | HR-TB | lineage2.2.1 | vn | ERR13289666 | Sensitive | lineage1.2.2.2 | None | SRR21001888 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001886 | Pre-XDR-TB | lineage2.2.1 | None | SRR21001882 | XDR-TB | lineage2.2.1 | None | SAMN02599053 | Sensitive | lineage3 | in | SRR1173191 | Sensitive | lineage3 | None | SRR21001887 | Pre-XDR-TB | lineage2.2.1 | None | DRR188553 | Sensitive | lineage2.2.1 | None | ERR2513781 | Sensitive | lineage1.2.2.2 | None | SAMN02598997 | Sensitive | lineage3 | in | SRR1173122 | Sensitive | lineage3 | None | SRR1173440 | Sensitive | lineage3 | None | ERR4798015 | HR-TB | lineage3 | in | SRR26112673 | Sensitive | lineage1.2.1.2.1 | None | ERR4796963 | MDR-TB | lineage3 | in | ERR4827842 | Sensitive | lineage4.3.3 | None | SRR5065432 | Sensitive | lineage1.1.1 | vn | SRR21001889 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174305 | Sensitive | lineage3 | None | ERR4796459 | Sensitive | lineage3 | in |
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