EBG00000313325 - n.-188T>G
Drug resistance types
73 Sensitive
2 RR-TB
4 HR-TB
1 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 3 |
| lineage3 | 14 |
| La1.7.1 | 2 |
| lineage7 | 17 |
| lineage1.1.2 | 5 |
| lineage9 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.8 | 3 |
| lineage4.1.2 | 2 |
| lineage2.2.1 | 2 |
| lineage6.1.1 | 1 |
| lineage6.2.2;lineage4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.3.3 | 2 |
| lineage6 | 2 |
| lineage1.2.2.1 | 2 |
| lineage3.1.1 | 7 |
| lineage1.2.2.2 | 2 |
| lineage4.5 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.1.2.1 | 2 |
| lineage2.2.2 | 1 |
| La1.3 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.8.1 | 1 |
| lineage4.1.1 | 3 |
| lineage4.8.2 | 3 |
| lineage4.1.1.3.1 | 4 |
| lineage4.6 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.6.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage4.1.4 | 1 |
| lineage5.1.3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 99 |
Geographic prevalence
Country level data for this variant is available for 67 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1791907 | Other | La1.8.1 | None | SRR2100077 | Sensitive | lineage3 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792002 | Other | La1.7.1 | None | SRR2100074 | Other | La1.8.1 | None | SRR2100084 | Sensitive | lineage3 | None | SRR2100090 | Sensitive | lineage3 | None | SRR2100082 | Sensitive | lineage3 | None | ERR233349 | Other | lineage7 | None | SRR2100092 | Sensitive | lineage1.1.2 | None | ERR181315 | MDR-TB | lineage9 | so | ERR1199041 | Sensitive | lineage4.6.1.1 | None | SRR2469374 | Sensitive | lineage4.8 | None | ERR841404 | Sensitive | lineage4.1.2 | ch | ERR181440 | Sensitive | lineage2.2.1 | dj | ERR1199034 | Sensitive | lineage4.6.1.1 | ug | ERR1200618 | Sensitive | lineage7 | None | ERR1200603 | Sensitive | lineage7 | None | ERR233362 | Sensitive | lineage6.1.1 | sn | ERR1200639 | Sensitive | lineage7 | et | ERR1200631 | Sensitive | lineage7 | et | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1199038 | Sensitive | lineage4.6.1.1 | ug | ERR1193641 | Sensitive | lineage4.3.3 | et | ERR1200609 | Sensitive | lineage3 | et | ERR233346 | Sensitive | lineage7 | None | ERR233368 | Sensitive | lineage6 | None | ERR1200629 | Sensitive | lineage1.2.2.1 | et | ERR1200613 | Sensitive | lineage7 | et | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR233364 | Other | lineage1.2.2.2 | cn | ERR2179783 | Other | lineage4.5 | cn | ERR1200612 | Sensitive | lineage7 | et | ERR245819 | Other | lineage3.1.1 | None | ERR1200605 | Other | lineage4.2.1 | et | ERR1200638 | Sensitive | lineage3 | et | ERR245820 | Sensitive | lineage1.1.3.2 | None | ERR1200636 | Other | lineage7 | et | ERR233354 | Sensitive | lineage7 | None | ERR1200635 | Sensitive | lineage7 | et | ERR1200606 | Sensitive | lineage7 | et | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR1200602 | Sensitive | lineage7 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200615 | Sensitive | lineage4.8 | et | ERR1200607 | HR-TB | lineage3 | et | ERR841406 | Other | lineage4.1.2 | ch | ERR1200604 | Sensitive | lineage7 | et | ERR233366 | Sensitive | lineage6 | None | ERR1200616 | Sensitive | lineage4.1.2.1 | et | ERR1200622 | Other | La1.3 | et | ERR1200623 | Sensitive | lineage7 | et | ERR1200632 | Sensitive | lineage1.1.3.1 | et | ERR1200627 | Sensitive | lineage4.3.3 | et | ERR233365 | Sensitive | lineage1.1.1.1 | vn | ERR1200617 | Other | lineage7 | et | ERR1200626 | Sensitive | lineage1.1.2 | et | ERR233357 | Other | lineage2.2.1 | None | ERR1200611 | Other | lineage4.6.3 | et | ERR1200619 | Sensitive | lineage7 | et | ERR046778 | HR-TB | lineage4.8.1 | gb | ERR233347 | Sensitive | lineage3 | None | ERR046729 | Sensitive | lineage3.1.1 | gb | ERR046737 | Sensitive | lineage4.1.1 | gb | ERR046751 | Sensitive | lineage4.8.2 | gb | ERR046774 | Other | La1.8.1 | None | ERR046789 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046788 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046812 | Sensitive | lineage3 | None | ERR1200621 | Sensitive | lineage4.6 | et | ERR046768 | Sensitive | lineage4.8.2 | gb | ERR046773 | Sensitive | lineage3.1.1 | gb | ERR046780 | HR-TB | lineage3 | gb | ERR046800 | Pre-XDR-TB | lineage4.1.1.3.1 | gb | ERR046814 | Sensitive | lineage3 | None | ERR046803 | Sensitive | lineage3 | None | ERR046833 | Sensitive | lineage4.8 | gb | ERR046828 | Sensitive | lineage3 | None | ERR046834 | HR-TB | lineage4.6.2.2 | gb | ERR046839 | Sensitive | lineage4.6.2.1 | gb | ERR046830 | Sensitive | lineage3.1.2 | None | ERR046843 | Sensitive | lineage4.1.1.3.1 | gb | ERR046858 | Sensitive | lineage3.1.1 | gb | ERR046880 | Sensitive | lineage1.2.2.2 | gb | ERR046861 | Sensitive | lineage3.1.1 | gb | ERR046863 | Sensitive | lineage3 | gb | ERR046876 | Sensitive | lineage4.8.2 | gb | ERR046864 | Sensitive | lineage4.1.4 | gb | ERR046918 | RR-TB | lineage5.1.3 | gb | ERR046896 | Sensitive | lineage1.1.2 | None | ERR046900 | Sensitive | lineage1.1.2 | gb | ERR046906 | Sensitive | lineage4.1.1 | gb | ERR046912 | Sensitive | lineage4.1.1 | gb | ERR046897 | Sensitive | lineage4.4.1.1 | gb | ERR046909 | Sensitive | lineage4.9 | None | ERR046914 | Sensitive | lineage3.1.1 | gb |
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