lineage | Count |
---|---|
lineage4.1.2 | 39 |
lineage4.1.2.1 | 5 |
lineage1.1.1.1 | 2 |
lineage2.2.2 | 1 |
lineage4.8 | 1 |
lineage1.2.2.2 | 1 |
lineage2.2.1 | 1 |
lineage4.3.4.1 | 2 |
La1.7.1 | 1 |
lineage4.6.1.1 | 1 |
spoligotype | Count |
---|---|
None | 54 |
ID | Drug resistance | Lineage | Country iso2 | SRR4033093 | Sensitive | lineage4.1.2 | None | SRR4033111 | Sensitive | lineage4.1.2 | None | SRR4033116 | Sensitive | lineage4.1.2 | za | SRR4033094 | Sensitive | lineage4.1.2 | za | SRR4033598 | Sensitive | lineage4.1.2 | za | SRR4033126 | Sensitive | lineage4.1.2 | za | SRR4033133 | Sensitive | lineage4.1.2 | za | ERR4796692 | HR-TB | lineage4.1.2.1 | in | SRR4033120 | Sensitive | lineage4.1.2 | za | SRR4033131 | Sensitive | lineage4.1.2 | None | SRR4033573 | Sensitive | lineage4.1.2 | za | SRR4033140 | Sensitive | lineage4.1.2 | za | SRR4033097 | Sensitive | lineage4.1.2 | za | SRR4033098 | Sensitive | lineage4.1.2 | None | ERR2446568 | HR-TB | lineage4.1.2.1 | nl | SRR4033128 | Sensitive | lineage4.1.2 | za | SRR4033110 | Sensitive | lineage4.1.2 | za | SRR5074131 | Sensitive | lineage1.1.1.1 | vn | ERR3275369 | HR-TB | lineage4.1.2.1 | nl | SRR4033117 | Sensitive | lineage4.1.2 | None | SRR4033109 | Sensitive | lineage4.1.2 | za | ERR2041804 | MDR-TB | lineage4.1.2.1 | rs | ERR4811191 | Sensitive | lineage2.2.2 | cn | SRR4033121 | Sensitive | lineage4.1.2 | za | SRR21689955 | HR-TB | lineage4.8 | None | SRR4033148 | Sensitive | lineage4.1.2 | za | SRR4033122 | Sensitive | lineage4.1.2 | za | SRR4033595 | Sensitive | lineage4.1.2 | za | ERR2509678 | Sensitive | lineage1.2.2.2 | gb | ERR11773833 | Pre-XDR-TB | lineage2.2.1 | None | SRR16058125 | HR-TB | lineage4.3.4.1 | None | ERR1035134 | Sensitive | lineage1.1.1.1 | vn | SRR4033108 | Sensitive | lineage4.1.2 | za | SRR4033118 | Sensitive | lineage4.1.2 | za | SRR4033092 | Sensitive | lineage4.1.2 | za | ERR2517426 | HR-TB | lineage4.1.2.1 | nl | SRR4033127 | Sensitive | lineage4.1.2 | za | SRR4033597 | Sensitive | lineage4.1.2 | za | SRR4033135 | Sensitive | lineage4.1.2 | za | SRR4033105 | Sensitive | lineage4.1.2 | za | ERR11081431 | Other | La1.7.1 | None | SRR4033106 | Sensitive | lineage4.1.2 | za | SRR4033585 | Sensitive | lineage4.1.2 | za | ERR9125790 | HR-TB | lineage4.3.4.1 | None | SRR4033593 | Sensitive | lineage4.1.2 | za | SRR17657997 | Sensitive | lineage4.6.1.1 | None | SRR4033107 | Sensitive | lineage4.1.2 | za | SRR4033132 | Sensitive | lineage4.1.2 | za | SRR4033115 | Sensitive | lineage4.1.2 | za | SRR4033596 | Sensitive | lineage4.1.2 | za | SRR4033090 | Sensitive | lineage4.1.2 | None | SRR4033129 | Sensitive | lineage4.1.2 | za | SRR4033130 | Sensitive | lineage4.1.2 | za | SRR4033136 | Sensitive | lineage4.1.2 | za |
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