EBG00000313325 - n.383G>C
Drug resistance types
21 Sensitive
18 RR-TB
17 HR-TB
18 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
61 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 32 |
| La1.8.1 | 7 |
| La1 | 2 |
| lineage4.1.2.1 | 8 |
| lineage4.3.4.1 | 2 |
| La1.2 | 3 |
| lineage2.2.1 | 10 |
| lineage1.1.3.3 | 1 |
| lineage1.1.1.1 | 1 |
| 6 | |
| lineage3 | 12 |
| lineage4 | 4 |
| lineage2.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.2.1 | 2 |
| lineage2.2.2 | 2 |
| La1.6 | 2 |
| lineage1.1.2 | 4 |
| lineage3.1.2.1 | 1 |
| lineage4.6.1.1 | 3 |
| lineage4.6.1 | 1 |
| lineage4.9;lineage1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage4.8 | 6 |
| lineage4.1.3 | 1 |
| lineage4.3.4.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.3.3 | 3 |
| lineage1.2.2.2 | 1 |
| lineage4.6.5 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1 | 3 |
| lineage4.3.1.1 | 2 |
| lineage4.1.1.3.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 145 |
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283043 | Other | lineage4.9 | None | ERR3283053 | Other | lineage4.9 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR3468577 | HR-TB | La1 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR3797024 | Other | lineage4.9 | None | ERR4024582 | MDR-TB | lineage4.1.2.1 | None | ERR3797074 | Sensitive | lineage4.9 | None | ERR4188202 | Other | La1.8.1 | None | ERR4188215 | Other | La1.8.1 | None | ERR4457829 | MDR-TB | lineage4.1.2.1 | None | ERR4769419 | Other | lineage4.9 | None | ERR473368 | Sensitive | lineage4.3.4.1 | None | ERR4627362 | Other | La1.8.1 | None | ERR4769478 | Other | La1.2 | None | ERR4769505 | Other | lineage4.9 | None | ERR752034 | Sensitive | lineage2.2.1 | None | ERR4769503 | Other | La1.2 | None | ERR4798769 | Other | lineage1.1.3.3 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR6338285 | Other | La1.2 | None | ERR736837 | Other | lineage4.9 | None | SRR1003105 | Pre-XDR-TB | None | ERR9117842 | Sensitive | lineage3 | None | SRR1013531 | MDR-TB | lineage4.9 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013528 | Pre-XDR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013527 | RR-TB | lineage2.2 | None | SRR10315465 | MDR-TB | lineage4.4.1.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315707 | MDR-TB | lineage4.4.1.1.1 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR10315579 | Other | lineage2.2.1.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062867 | RR-TB | lineage4.9;lineage2.2.1 | None | SRR1062864 | Sensitive | lineage4.9;lineage2.2.1 | None | SRR1062865 | HR-TB | lineage2.2.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR10993953 | Other | La1.6 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1106670 | Other | lineage4.9 | None | SRR1140736 | RR-TB | None | SRR1172322 | Sensitive | lineage1.1.2 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1141261 | MDR-TB | lineage4.9 | None | SRR1172751 | HR-TB | lineage3.1.2.1 | None | SRR1172943 | HR-TB | lineage3 | None | SRR1173013 | Sensitive | lineage1.1.2 | None | SRR1173170 | Other | lineage4.9 | None | SRR1173182 | Other | lineage4.6.1.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173717 | MDR-TB | lineage4.6.1 | None | SRR1173416 | Other | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173720 | Other | lineage4.9 | None | SRR1173740 | Other | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR14782555 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782707 | Other | lineage2.2.1 | None | SRR16156291 | Other | lineage4.9 | None | SRR18002872 | Pre-XDR-TB | lineage2.2.1 | None | SRR16157045 | Sensitive | lineage4.9 | None | SRR3105762 | HR-TB | None | ERR176672 | Sensitive | lineage4.3.4.2.1 | None | SRR3675261 | Other | lineage1.2.1.1 | None | ERR1750878 | Sensitive | lineage4.3.4.2.1 | zw | ERR176517 | Sensitive | lineage1.1.3.2 | None | ERR4813263 | MDR-TB | lineage4.8 | None | ERR176718 | Sensitive | lineage2.2.1 | None | ERR4817976 | HR-TB | lineage4.1.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR216901 | Other | lineage3.1.1 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4817262 | Other | lineage4.8 | None | ERR4818128 | RR-TB | lineage4.1.2.1 | None | ERR4819087 | Other | lineage4.3.3 | None | ERR4819217 | Other | lineage1.2.2.2 | None | ERR4818904 | Other | lineage4.8 | None | ERR4818444 | Other | lineage4.6.5 | None | ERR2513354 | Sensitive | lineage3 | None | ERR4819383 | RR-TB | lineage4.9 | None | SAMN02599075 | Sensitive | lineage1.1.2 | None | ERR4819863 | RR-TB | lineage4.9 | None | SRR5217421 | Sensitive | lineage2.2.1 | None | SAMN02599061 | MDR-TB | lineage3 | None | ERR4820503 | Other | lineage2.2.1 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5382721 | Other | La1.8.1 | None | ERR2514926 | Other | lineage4.6.2.2 | gb | ERR4820030 | Other | lineage4.9 | None | SRR6045480 | Other | lineage4.1.1 | None | SRR6045422 | Other | lineage4.3.1.1 | None | ERR4821280 | Other | lineage4.1.1 | gb | ERR2747678 | Other | La1.8.1 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045614 | Other | lineage4.8 | None | ERR4821550 | Other | lineage2.2.1 | None | SRR6046442 | Other | lineage3 | None | SRR6044769 | Other | lineage1.1.2 | None | SRR6044888 | Other | lineage4.1.1.3.1 | None | SRR6046246 | Other | lineage3 | None | ERR4829618 | Sensitive | lineage4.1.2.1 | it | SRR6046541 | Other | lineage4.9 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046641 | Other | lineage4.8 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR279657 | Sensitive | lineage2.2.1.1 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR7131004 | Other | lineage4.6.2.2 | None | SRR6785282 | Other | lineage4.3.3 | None | ERR502507 | Sensitive | lineage5.1.4 | None | SAMN02567682 | Other | lineage4.6.1.1 | ug | ERR5162122 | HR-TB | lineage4.9 | None | SRR7646014 | MDR-TB | lineage4.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323039 | HR-TB | None | SRR9971168 | Other | lineage4.3.2.1 | None | DRR184932 | Other | lineage2.2.1 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323041 | HR-TB | None | ERR10796575 | RR-TB | lineage4.9 | None | ERR037235 | Sensitive | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | ERR10465983 | Sensitive | lineage4.8 | None | ERR3283009 | Other | La1.8.1 | None | ERR10796617 | Other | lineage4.3.4.1 | None | ERR10796623 | Other | lineage4.1.1 | None | ERR10796625 | RR-TB | lineage4.4.1.1 | None | ERR3283010 | Other | La1 | None |
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