lineage | Count |
---|---|
lineage4.3.3 | 39 |
lineage2.2.1 | 17 |
lineage3 | 1 |
lineage4.1.2.1 | 2 |
lineage2.2.2 | 1 |
lineage1.2.1.2.1 | 1 |
lineage4.1.2 | 4 |
lineage4.4.2 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
lineage4.3.4.1 | 2 |
lineage2.2.1.1 | 1 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | SRR847775 | Pre-XDR-TB | lineage4.3.3 | za | ERR13284156 | MDR-TB | lineage2.2.1 | None | SRR1196670 | MDR-TB | lineage4.3.3 | None | ERR9120006 | MDR-TB | lineage4.3.3 | None | SRR1175039 | HR-TB | lineage4.3.3 | None | SRR1723451 | MDR-TB | lineage2.2.1 | None | SRR16156753 | Pre-XDR-TB | lineage4.3.3 | None | SRR26937092 | MDR-TB | lineage2.2.1 | None | ERR7911073 | Pre-XDR-TB | lineage4.3.3 | za | SRR28046125 | Pre-XDR-TB | lineage3 | None | SRR1140955 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184304 | MDR-TB | lineage4.3.3 | None | ERR4813597 | HR-TB | lineage4.1.2.1 | None | SRR6824590 | MDR-TB | lineage2.2.1 | cn | SRR1184389 | MDR-TB | lineage4.3.3 | None | SRR1019162 | Pre-XDR-TB | lineage4.3.3 | None | SRR11342637 | MDR-TB | lineage4.3.3 | None | ERR13243568 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119877 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172843 | MDR-TB | lineage4.3.3 | None | ERR11552249 | MDR-TB | lineage4.1.2.1 | None | SRR12006680 | HR-TB | lineage1.2.1.2.1 | None | ERR11488485 | MDR-TB | lineage4.1.2 | None | SRR10305653 | MDR-TB | lineage2.2.1 | None | ERR11081923 | MDR-TB | lineage2.2.1 | None | SRR6824502 | MDR-TB | lineage2.2.1 | cn | ERR3639770 | MDR-TB | lineage2.2.1 | None | SRR15315823 | MDR-TB | lineage4.4.2 | None | SRR10315458 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR9971170 | MDR-TB | lineage4.3.3 | None | SRR1196587 | MDR-TB | lineage4.3.3 | None | ERR11069136 | MDR-TB | lineage2.2.1 | None | ERR11068521 | Other | lineage2.2.1 | None | SRR10869188 | Pre-XDR-TB | lineage4.3.3 | None | SRR22250069 | Other | lineage2.2.1 | None | ERR752107 | HR-TB | lineage2.2.1 | th | ERR11488943 | Pre-XDR-TB | lineage4.1.2 | None | SRR16156718 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350440 | Pre-XDR-TB | lineage4.3.3 | za | SRR1011483 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971047 | MDR-TB | lineage4.3.3 | None | SRR29231832 | MDR-TB | lineage4.3.4.1 | None | SRR29440994 | Other | lineage2.2.1 | None | SAMN02586022 | MDR-TB | lineage4.3.3 | za | SRR16156731 | Pre-XDR-TB | lineage4.3.3 | None | SAMN02350486 | Pre-XDR-TB | lineage4.3.3 | za | SAMN03246216 | MDR-TB | lineage2.2.1 | cn | SAMN01925657 | Pre-XDR-TB | lineage4.3.3 | None | SRR10315701 | MDR-TB | lineage4.3.3 | None | SRR16156695 | Pre-XDR-TB | lineage4.3.3 | None | ERR5987340 | MDR-TB | lineage4.3.3 | None | ERR2516069 | MDR-TB | lineage4.3.3 | za | ERR2707131 | MDR-TB | lineage4.3.4.1 | cd | SRR1062854 | Pre-XDR-TB | lineage4.3.3 | None | SRR21277253 | RR-TB | lineage2.2.1.1 | None | ERR5987411 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488429 | Pre-XDR-TB | lineage4.1.2 | None | ERR4827808 | MDR-TB | lineage2.2.1 | None | SRR16156723 | Pre-XDR-TB | lineage4.3.3 | None | SRR26937114 | MDR-TB | lineage2.2.1 | None | SAMN02585987 | MDR-TB | lineage4.3.3 | za | SRR1723452 | MDR-TB | lineage2.2.1 | None | SRR16156743 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971374 | Pre-XDR-TB | lineage4.3.3 | None | ERR9120007 | MDR-TB | lineage4.3.3 | None | ERR2515286 | Pre-XDR-TB | lineage4.3.3 | za | SRR1172858 | MDR-TB | lineage4.3.3 | None | SRR924224 | Pre-XDR-TB | lineage4.3.3 | None | ERR11488520 | MDR-TB | lineage4.1.2 | None | SRR9971195 | MDR-TB | lineage4.3.3 | None |
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