lineage | Count |
---|---|
64 | |
lineage4 | 2 |
lineage2.2 | 1 |
lineage4.8 | 2 |
La1.8.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4;lineage1.1 | 1 |
lineage2.2.1 | 3 |
lineage4.7 | 1 |
lineage4.9 | 4 |
La2 | 1 |
lineage2 | 2 |
lineage4.1.3 | 2 |
lineage1.2.2.2 | 1 |
lineage3.1.2 | 1 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
La3 | 1 |
lineage4.5 | 1 |
lineage6.3;lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 91 |
ID | Drug resistance | Lineage | Country iso2 | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | ERR212033 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4816585 | Other | lineage2.2 | None | SRR3675572 | Other | None | SRR3675571 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR4818929 | HR-TB | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | SRR6044790 | HR-TB | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | SRR6045526 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR6046397 | Other | None | SRR6045233 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6789626 | Other | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR294266 | HR-TB | None | ERR323039 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR7496509 | Other | None | ERR3283036 | HR-TB | None | ERR323053 | HR-TB | None | ERR3283027 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3797069 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR6358991 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR702404 | HR-TB | None | ERR736865 | HR-TB | None | ERR702406 | HR-TB | None | ERR736839 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR987722 | HR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1172234 | Other | None | SRR1173778 | Other | None | SRR1172310 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1173629 | Other | None | SRR1184381 | MDR-TB | None | SRR1174897 | HR-TB | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR26159063 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675465 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | ERR4815604 | HR-TB | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None |
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