EBG00000313339 - n.1716G>A
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
3 Sensitive
0 RR-TB
12 HR-TB
77 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.6.1.2 | 101 |
| lineage4.3.3;lineage4.6.1.2 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 103 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR278516 | MDR-TB | lineage4.6.1.2 | None | ERR1654694 | MDR-TB | lineage4.6.1.2 | None | ERR13290287 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR9125483 | HR-TB | lineage4.6.1.2 | None | SRR29231707 | MDR-TB | lineage4.6.1.2 | None | SRR1167130 | HR-TB | lineage4.6.1.2 | None | SRR28409370 | HR-TB | lineage4.6.1.2 | None | ERR3132195 | MDR-TB | lineage4.6.1.2 | None | ERR3132139 | Sensitive | lineage4.6.1.2 | None | ERR10748540 | MDR-TB | lineage4.6.1.2 | None | SRR29230776 | MDR-TB | lineage4.6.1.2 | None | SRR1165467 | HR-TB | lineage4.6.1.2 | None | SRR29231684 | MDR-TB | lineage4.3.3;lineage4.6.1.2 | None | SRR29231784 | MDR-TB | lineage4.6.1.2 | None | ERR1654663 | MDR-TB | lineage4.6.1.2 | None | SRR29231791 | MDR-TB | lineage4.6.1.2 | None | SAMN02414854 | Pre-XDR-TB | lineage4.6.1.2 | se | ERR2706966 | MDR-TB | lineage4.3.3;lineage4.6.1.2 | cd | ERR2707016 | MDR-TB | lineage4.6.1.2 | cd | ERR2707052 | MDR-TB | lineage4.6.1.2 | cd | ERR2707206 | MDR-TB | lineage4.6.1.2 | cd | ERR2706968 | MDR-TB | lineage4.6.1.2 | cd | ERR2706920 | MDR-TB | lineage4.6.1.2 | cd | ERR2707188 | MDR-TB | lineage4.6.1.2 | cd | ERR2706915 | MDR-TB | lineage4.6.1.2 | cd | ERR2707091 | MDR-TB | lineage4.6.1.2 | cd | ERR2707009 | MDR-TB | lineage4.6.1.2 | cd | ERR1023325 | HR-TB | lineage4.6.1.2 | None | ERR1023347 | HR-TB | lineage4.6.1.2 | None | ERR1654656 | MDR-TB | lineage4.6.1.2 | None | SRR2100904 | MDR-TB | lineage4.6.1.2 | None | ERR1199153 | HR-TB | lineage4.6.1.2 | cd | ERR1199099 | MDR-TB | lineage4.6.1.2 | cd | ERR1199106 | MDR-TB | lineage4.6.1.2 | cd | ERR1199108 | MDR-TB | lineage4.6.1.2 | cd | ERR1199109 | MDR-TB | lineage4.6.1.2 | cd | ERR1199115 | MDR-TB | lineage4.6.1.2 | cd | ERR1199117 | MDR-TB | lineage4.6.1.2 | cd | ERR1199123 | MDR-TB | lineage4.6.1.2 | cd | ERR1199127 | MDR-TB | lineage4.6.1.2 | cd | ERR551073 | Sensitive | lineage4.6.1.2 | cg | ERR551253 | MDR-TB | lineage4.6.1.2 | cg | ERR1654671 | MDR-TB | lineage4.6.1.2 | None | SRR29230987 | MDR-TB | lineage4.6.1.2 | None | SRR29231849 | MDR-TB | lineage4.6.1.2 | None | ERR13290288 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR16058665 | HR-TB | lineage4.6.1.2 | None | SRR29231672 | MDR-TB | lineage4.6.1.2 | None | SRR29231659 | MDR-TB | lineage4.6.1.2 | None | SRR29231735 | MDR-TB | lineage4.6.1.2 | None | SRR1165498 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR29230996 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR29231762 | MDR-TB | lineage4.6.1.2 | None | SRR29231553 | MDR-TB | lineage4.6.1.2 | None | SRR29231714 | MDR-TB | lineage4.6.1.2 | None | ERR386875 | MDR-TB | lineage4.6.1.2 | None | SRR29231671 | MDR-TB | lineage4.6.1.2 | None | SRR29231752 | MDR-TB | lineage4.6.1.2 | None | SAMN02414841 | HR-TB | lineage4.6.1.2 | se | ERR2707224 | MDR-TB | lineage4.6.1.2 | cd | ERR2707223 | MDR-TB | lineage4.6.1.2 | cd | ERR2707099 | MDR-TB | lineage4.6.1.2 | cd | ERR2707174 | MDR-TB | lineage4.6.1.2 | cd | ERR2706975 | MDR-TB | lineage4.6.1.2 | cd | SRR5535858 | MDR-TB | lineage4.6.1.2 | None | ERR2517064 | MDR-TB | lineage4.6.1.2 | gb | ERR4814443 | HR-TB | lineage4.6.1.2 | gb | SRR29231692 | MDR-TB | lineage4.6.1.2 | None | SRR29231775 | MDR-TB | lineage4.6.1.2 | None | SRR1162753 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR1213941 | Sensitive | lineage4.6.1.2 | None | SRR1166807 | HR-TB | lineage4.6.1.2 | None | SRR5535857 | MDR-TB | lineage4.6.1.2 | None | SRR29231543 | MDR-TB | lineage4.6.1.2 | None | SRR29231314 | MDR-TB | lineage4.6.1.2 | None | SRR1166711 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR29231781 | MDR-TB | lineage4.6.1.2 | None | ERR1654670 | MDR-TB | lineage4.6.1.2 | None | ERR1654659 | MDR-TB | lineage4.6.1.2 | None | SRR29231747 | MDR-TB | lineage4.6.1.2 | None | SRR17658013 | MDR-TB | lineage4.6.1.2 | None | SRR29231793 | MDR-TB | lineage4.6.1.2 | None | SRR29231694 | MDR-TB | lineage4.6.1.2 | None | ERR1654700 | MDR-TB | lineage4.6.1.2 | None | SRR1162705 | HR-TB | lineage4.6.1.2 | None | ERR13290289 | Pre-XDR-TB | lineage4.6.1.2 | None | SRR29231842 | MDR-TB | lineage4.6.1.2 | None | ERR2706960 | MDR-TB | lineage4.6.1.2 | cd | ERR2706942 | MDR-TB | lineage4.6.1.2 | cd | ERR2707124 | MDR-TB | lineage4.6.1.2 | cd | ERR2707142 | MDR-TB | lineage4.6.1.2 | cd | ERR2707038 | MDR-TB | lineage4.6.1.2 | cd | ERR2707218 | MDR-TB | lineage4.6.1.2 | cd | ERR2707072 | Pre-XDR-TB | lineage4.6.1.2 | cd | ERR2707161 | MDR-TB | lineage4.6.1.2 | cd | ERR2707051 | MDR-TB | lineage4.6.1.2 | cd | ERR2706993 | MDR-TB | lineage4.6.1.2 | cd | ERR1654690 | MDR-TB | lineage4.6.1.2 | None | SRR1165589 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR13290286 | Pre-XDR-TB | lineage4.6.1.2 | None | ERR10748216 | MDR-TB | lineage4.6.1.2 | None | ERR1654685 | MDR-TB | lineage4.6.1.2 | None | ERR1654658 | MDR-TB | lineage4.6.1.2 | None |
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