lineage | Count |
---|---|
lineage2.2.2 | 6 |
lineage2.2.1.1 | 3 |
lineage2.2.1 | 14 |
lineage1.1.1.1 | 3 |
lineage3 | 1 |
lineage4.9 | 1 |
lineage4.4.2 | 1 |
spoligotype | Count |
---|---|
None | 29 |
ID | Drug resistance | Lineage | Country iso2 | SRR1048871 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048872 | Pre-XDR-TB | lineage2.2.2 | None | SRR1368341 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR3742658 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21887747 | Pre-XDR-TB | lineage2.2.1 | None | ERR13291142 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360565 | Pre-XDR-TB | lineage2.2.2 | kr | SRR25206953 | XDR-TB | lineage2.2.1 | None | ERR1034638 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742662 | XDR-TB | lineage2.2.1 | None | SRR13355778 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4811294 | XDR-TB | lineage2.2.1 | cn | SRR1368338 | XDR-TB | lineage2.2.1 | None | ERR1034637 | Pre-XDR-TB | lineage2.2.1 | None | SRR1368340 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742660 | XDR-TB | lineage2.2.1 | None | SRR5065318 | Sensitive | lineage1.1.1.1 | vn | SRR1013571 | Pre-XDR-TB | lineage2.2.2 | None | ERR4829957 | Pre-XDR-TB | lineage3 | pk | SRR1368339 | XDR-TB | lineage2.2.1 | None | SAMN02398712 | Pre-XDR-TB | lineage2.2.2 | kr | ERR7339139 | Sensitive | lineage1.1.1.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR8651660 | Pre-XDR-TB | lineage4.4.2 | cn | SRR1368337 | XDR-TB | lineage2.2.1 | None | ERR11044492 | Sensitive | lineage1.1.1.1 | None | SRR3742659 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742661 | XDR-TB | lineage2.2.1 | None | SRR1144780 | Pre-XDR-TB | lineage2.2.2 | None |
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