EBG00000313339 - n.2809C>T
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
1629 Sensitive
128 RR-TB
240 HR-TB
349 MDR-TB
200 Pre-XDR-TB
14 XDR-TB
1798 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 155 |
| lineage4.9 | 1619 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage4.3.4.2.1 | 83 |
| lineage2.2.1 | 455 |
| lineage6.2.2 | 6 |
| lineage4.1.1.1 | 26 |
| lineage4.3.2 | 18 |
| lineage4.3.4.2 | 41 |
| lineage3 | 181 |
| La1.8.1 | 122 |
| lineage4.3.3 | 110 |
| lineage4.1.2.1 | 165 |
| lineage2.2.2 | 82 |
| lineage4.7 | 22 |
| lineage4.3.2.1 | 49 |
| lineage4.3.1.1 | 7 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage2.2.1.1 | 41 |
| lineage6.3.1 | 6 |
| lineage4.6.1.1 | 39 |
| lineage2.2.2;lineage4 | 12 |
| lineage4.8.1 | 12 |
| lineage3;lineage4.9 | 6 |
| lineage1.2.2.1 | 5 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 12 |
| lineage4.2.2.2 | 21 |
| lineage4.4.1.1 | 71 |
| lineage1.1.1.1 | 11 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage1.1.2 | 74 |
| lineage4.1.2 | 48 |
| lineage6.1.1 | 14 |
| lineage4 | 21 |
| lineage4.1.4 | 7 |
| lineage4.4.1.1.1 | 15 |
| lineage4.5 | 29 |
| lineage1.2.2.2 | 35 |
| lineage4.2.1 | 34 |
| lineage4.4.2 | 23 |
| lineage2.2.1;lineage4 | 11 |
| lineage4.3.4;lineage4.9 | 1 |
| La1.2.BCG | 24 |
| lineage4.4 | 4 |
| lineage3;lineage4 | 3 |
| lineage3.1.1 | 39 |
| lineage4.1.1.3 | 50 |
| lineage4.8;lineage4.9 | 2 |
| lineage2.2.1;lineage4.9 | 5 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage2;lineage4.9 | 4 |
| La3;lineage4 | 1 |
| lineage4.3;lineage4.9 | 1 |
| La1.2 | 24 |
| lineage1.2.1.2 | 5 |
| lineage4.6.4 | 2 |
| lineage3.1.2.2 | 6 |
| lineage4.2.1.1 | 19 |
| lineage4.6.2.2 | 25 |
| lineage4.1.1.3.1 | 9 |
| lineage4.1.1 | 6 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La1.2.BCG;lineage4.9 | 8 |
| lineage3.1.2.1 | 14 |
| lineage4.3.4.1 | 31 |
| lineage3.1.2.1;lineage4 | 2 |
| lineage4.8.2 | 5 |
| La1.3 | 11 |
| lineage1.1.3.3 | 4 |
| lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage3.1.2 | 9 |
| lineage3.1.3 | 7 |
| lineage4.4.1.1;lineage4.6.1.2 | 4 |
| lineage1.1.3.2 | 8 |
| lineage4.1 | 7 |
| lineage4.2.2 | 23 |
| La1.6 | 6 |
| lineage5.1.1 | 16 |
| La3;M.canetti;lineage2.1;lineage4.9 | 3 |
| lineage6.2.1 | 3 |
| lineage1.1.1 | 6 |
| lineage2.2.1.2 | 7 |
| lineage2.2;lineage4 | 2 |
| 8 | |
| lineage1.1.2;lineage4 | 2 |
| lineage1.2.2.1;lineage4 | 3 |
| lineage4.6.1.2 | 16 |
| lineage4.9.1 | 12 |
| La1.6;La3;lineage4.9 | 1 |
| lineage1.1.3.2;lineage4 | 1 |
| La2 | 2 |
| lineage4.6 | 7 |
| lineage4.1.1.2 | 4 |
| lineage1 | 3 |
| lineage1.2.1.2.1 | 20 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 2 |
| lineage3.1.3;lineage4.9 | 1 |
| lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage3;lineage4.2.2.2 | 2 |
| lineage2.2.1;lineage2.2.2 | 6 |
| lineage4.1.3 | 5 |
| lineage1.2.1.1 | 2 |
| lineage4.6.5 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| lineage3.1 | 4 |
| lineage5 | 3 |
| lineage5.1.2 | 1 |
| lineage5.1.4 | 4 |
| La1.8.2 | 9 |
| lineage4.4.1.2 | 9 |
| lineage6.1.3 | 5 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| lineage4.2.2.1 | 4 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| La1.7.1 | 17 |
| lineage4.3.1 | 1 |
| lineage1.1;lineage4.9 | 1 |
| lineage6 | 3 |
| lineage4.3 | 5 |
| lineage6.2.3 | 2 |
| La1.8.1;lineage4.9 | 5 |
| lineage2 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| lineage5.1.3 | 2 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 2 |
| M.canetti | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage4.3.2.1;lineage4.9 | 2 |
| lineage4.1.2.1.1 | 1 |
| La1.4 | 2 |
| lineage1.1 | 1 |
| lineage6.1.2 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2.1 | 2 |
| lineage2.2;lineage4.2.2;lineage4.4 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage2.2.2;lineage4.9 | 2 |
| lineage4.3;lineage4.9.1 | 1 |
| La1.8.X-unk6 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.6.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 2 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage3.1;lineage4.6.1.1 | 2 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2;lineage3 | 1 |
| lineage2;lineage4 | 1 |
| lineage3.1.1;lineage4.6.1.1 | 2 |
| lineage4.4.2;lineage4.5 | 1 |
| lineage3.1;lineage4 | 1 |
| lineage1.1.3 | 2 |
| lineage1.1.1;lineage2.2.1;lineage4 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 1 |
| lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage5.1 | 1 |
| lineage3.1;lineage4.1.2 | 2 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.8.1;lineage4 | 1 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 4358 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 4358 rows and could cause your browser to crash if rendered.
