EBG00000313339 - n.2849T>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
1117 Sensitive
146 RR-TB
168 HR-TB
304 MDR-TB
158 Pre-XDR-TB
16 XDR-TB
1819 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3.1 | 11 |
| lineage2.2.1 | 481 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.4.1.1 | 61 |
| lineage3 | 135 |
| lineage4.1.2.1 | 129 |
| lineage4.3.3 | 100 |
| lineage2.2.1.1 | 34 |
| La1.8.1 | 109 |
| lineage4.9 | 1357 |
| lineage4.2.1 | 34 |
| La1.2 | 23 |
| lineage3.1.1 | 37 |
| lineage4.6.1.1 | 26 |
| lineage2.2.2;lineage4.9 | 2 |
| lineage4.8 | 172 |
| lineage5.1 | 1 |
| lineage6.1.1 | 11 |
| lineage4 | 18 |
| lineage4.5 | 20 |
| lineage4.3.3;lineage4.8 | 4 |
| lineage4.6.1.2 | 14 |
| lineage3.1;lineage4.1.2 | 2 |
| lineage4.3.4.2.1 | 68 |
| lineage4.1.2 | 34 |
| lineage3.1.2.2 | 5 |
| lineage6.3.1 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage1.1.1 | 7 |
| lineage4.1.3 | 3 |
| lineage4.1.1.3.1;lineage4.9 | 1 |
| lineage4.8.2 | 6 |
| lineage4.2.1.1 | 16 |
| lineage1.2.2.2 | 19 |
| lineage3.1.1;lineage4 | 1 |
| lineage5.1.4 | 3 |
| lineage4.3.4.1 | 25 |
| lineage4.1.1.2 | 6 |
| lineage4.1.1.1 | 25 |
| lineage4.2.2 | 23 |
| lineage2.2.2 | 50 |
| lineage4.3;lineage4.9 | 2 |
| lineage1.2.1.2 | 6 |
| lineage4.3.2 | 14 |
| lineage1.1.2 | 22 |
| lineage4.3.2.1 | 45 |
| lineage3.1.2.1 | 11 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 12 |
| La1.7.1 | 17 |
| lineage1.2.1.1 | 2 |
| lineage3.1 | 4 |
| lineage4.1.1.3 | 39 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage6.2.3 | 2 |
| lineage4.4.2 | 19 |
| lineage1.2.2.1 | 4 |
| lineage4.2.2.2 | 22 |
| lineage2.2.1;lineage4 | 12 |
| lineage2.2.1;lineage4.8 | 1 |
| La3;lineage4 | 1 |
| lineage4.6.4 | 2 |
| lineage4.1.4 | 5 |
| La1.2.BCG | 20 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.1.2.1;lineage4.9 | 3 |
| La1.8.1;lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage3;lineage4.2.2.2 | 2 |
| lineage4.2;lineage4.9 | 1 |
| lineage4.7 | 20 |
| lineage4.6.2.2 | 21 |
| La1.2.BCG;lineage4.9 | 7 |
| lineage4.6 | 5 |
| lineage4.3.1.1 | 11 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.8.1 | 9 |
| La1.3 | 11 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage1.1.3.1 | 8 |
| lineage4.3.4.2 | 26 |
| lineage3;lineage4 | 3 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.1 | 2 |
| lineage4.4.1.1;lineage4.6.1.2 | 4 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage3.1.2.1;lineage4 | 2 |
| lineage4.3.4;lineage4.9 | 1 |
| lineage4.6.5 | 3 |
| lineage4.4.1.1.1 | 25 |
| lineage2.2.1.2 | 4 |
| lineage4.1 | 4 |
| La1.6 | 6 |
| lineage4.4.1.2 | 10 |
| lineage4.9.1 | 10 |
| La2 | 3 |
| lineage1.1.3.2 | 9 |
| lineage1.1.3.2;lineage4 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage3;lineage4.9 | 3 |
| lineage3.1.2 | 9 |
| lineage3.1.3 | 5 |
| lineage6.2.1 | 3 |
| lineage5.1.1 | 12 |
| 5 | |
| lineage1.1.2;lineage4 | 1 |
| lineage1 | 3 |
| lineage1.2.2.1;lineage4 | 3 |
| lineage2.2;lineage4 | 1 |
| lineage1.1.1.1 | 7 |
| La1.7;lineage4.9 | 2 |
| lineage5 | 2 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage1.1.3.3 | 3 |
| lineage4.3.1 | 1 |
| lineage6 | 3 |
| La1.8.2 | 8 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| lineage2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3.4.1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage6.2.2 | 2 |
| lineage3.1.3;lineage4.9 | 1 |
| lineage4.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage5.1.3 | 2 |
| lineage4.3 | 5 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage6.1.3 | 3 |
| La1.8.1;lineage4.9 | 5 |
| M.canetti;lineage4.9 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.2.2.1 | 4 |
| lineage1.1 | 1 |
| lineage4.6.3 | 1 |
| lineage4.3.2.1;lineage4.9 | 2 |
| La1.4 | 2 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage5.1.2 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.2;lineage4 | 6 |
| lineage2.1 | 1 |
| lineage4.4 | 2 |
| lineage2.2;lineage4.2.2;lineage4.4 | 1 |
| lineage4.3.4.2;lineage4.9 | 1 |
| lineage4.4.2;lineage4.5 | 1 |
| lineage4.8.2;lineage4.9 | 1 |
| lineage4.6.2 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| lineage2.2.1;lineage4.2.1 | 2 |
| lineage4.3;lineage4.9.1 | 1 |
| La1.8.X-unk6 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage4.4.1.1.1;lineage4.8 | 1 |
| lineage3.1;lineage4.6.1.1 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage3.1;lineage4 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage2.2;lineage4.9 | 1 |
| M.canetti;lineage2.1 | 1 |
| M.canetti | 1 |
| lineage4.1.2;lineage4.9 | 1 |
| lineage2.2;lineage3 | 1 |
| lineage2;lineage4 | 1 |
| lineage4.1;lineage4.9 | 1 |
| La3 | 1 |
| lineage3.1.1;lineage4.6.1.1 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 3728 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 3728 rows and could cause your browser to crash if rendered.
