| lineage | Count |
|---|---|
| lineage4.9 | 680 |
| La1.8.1 | 86 |
| lineage2.2.2 | 21 |
| lineage4.3.4.2.1 | 33 |
| lineage4.8 | 56 |
| lineage3;lineage4.9 | 1 |
| lineage4.4.1.1 | 27 |
| lineage2.2.1 | 276 |
| lineage4.3.2.1 | 25 |
| lineage3 | 40 |
| lineage4.9.1 | 3 |
| lineage2.2.1.1 | 22 |
| lineage4.3.3 | 41 |
| lineage4.1.1.3.1 | 3 |
| lineage4.1.1.3 | 19 |
| lineage4.3 | 3 |
| lineage1.1.2 | 8 |
| lineage4.1.1.1 | 9 |
| lineage4.1;lineage4.9 | 1 |
| lineage6.1.1 | 5 |
| La1.2 | 18 |
| lineage4.8;lineage4.9 | 2 |
| La1.8.1;lineage4 | 1 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.2.1 | 50 |
| lineage2.2.1;lineage4.8 | 1 |
| lineage4.6.2.2 | 7 |
| La1.2.BCG;lineage4.9 | 3 |
| lineage3.1;lineage4.1.2 | 2 |
| lineage4.1.2 | 15 |
| La1.2.BCG | 9 |
| lineage1.2.1.2.1;lineage4.9 | 1 |
| lineage4.9;lineage5.1.1 | 1 |
| lineage4.2.1.1 | 5 |
| lineage1.2.2.2 | 4 |
| lineage4.4.2 | 9 |
| lineage3.1.1;lineage4 | 1 |
| lineage4.8.1 | 6 |
| lineage1.2.2.1 | 3 |
| lineage4.3.4.2 | 15 |
| lineage1.1.3.1 | 2 |
| lineage4.2.2 | 15 |
| lineage4 | 9 |
| lineage4.6.1.1 | 5 |
| 2 | |
| lineage3.1.1 | 14 |
| lineage4.4.1.2 | 6 |
| lineage4.2.2.2 | 8 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 4 |
| lineage4.3.2 | 5 |
| lineage4.6 | 2 |
| lineage4.7 | 8 |
| lineage4.3.4.1 | 9 |
| lineage4.3.1.1 | 3 |
| La3;lineage4 | 1 |
| lineage4.1.4 | 3 |
| lineage4.6.5 | 2 |
| lineage3.1.1;lineage4.2.2.2 | 1 |
| M.canetti;lineage2.1 | 1 |
| La1.3 | 5 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage2.2.2;lineage4.9 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.5 | 6 |
| lineage2.2.1;lineage4 | 4 |
| lineage4.2.1 | 16 |
| lineage3.1.2.2 | 1 |
| lineage4.4.1.1.1 | 6 |
| lineage4.4.1.1;lineage4.6.1.2 | 4 |
| lineage1.1.1 | 4 |
| lineage2.2;lineage4 | 1 |
| La2 | 2 |
| lineage3;lineage4 | 2 |
| La1.7.1 | 11 |
| lineage4.1.1.1;lineage4.9 | 1 |
| lineage6.2.2 | 2 |
| lineage4.2 | 1 |
| lineage1.1.3.3 | 2 |
| lineage1.2.1.2.1 | 5 |
| lineage4.6.1.2 | 1 |
| lineage3.1.1;lineage4.3.2.1 | 1 |
| La1.6;La3;lineage4.9 | 1 |
| lineage4.1 | 2 |
| La1.8.2 | 7 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage3.1.2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.1.1 | 2 |
| lineage1.1.1.1 | 4 |
| lineage5.1.1 | 2 |
| lineage1.2.1.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti | 1 |
| lineage4.3.2.1;lineage4.9 | 1 |
| lineage5.1.3 | 1 |
| La1.8.1;lineage4.9 | 5 |
| lineage2.2.2;lineage4 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.2.2.1;lineage4 | 1 |
| La1.6 | 4 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.1.3 | 1 |
| La1.4 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.2.2.1 | 1 |
| lineage3.1.1;lineage4.9 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3;lineage4.9.1 | 1 |
| lineage1 | 1 |
| La1.8.X-unk6 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.4 | 1 |
| lineage3.1 | 1 |
| lineage4.2.1;lineage4.8 | 1 |
| spoligotype | Count |
|---|---|
| None | 1754 |