SRR18002967
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6045371
|
Other
|
lineage4.9
|
None
|
SRR3675509
|
Other
|
lineage4.9
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
ERR7821123
|
Other
|
lineage1.1.3.2
|
None
|
ERR3273109
|
HR-TB
|
lineage4
|
None
|
ERR4820030
|
Other
|
lineage4.9
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR212121
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
SRR12062542
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1213875
|
Sensitive
|
lineage4.3.3
|
de
|
SRR18003012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11465509
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR751326
|
Other
|
lineage4.9
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR1023295
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.2.1
|
None
|
ERR2229143
|
RR-TB
|
lineage4.9
|
None
|
SRR3675260
|
Sensitive
|
lineage4.9
|
None
|
ERR176779
|
HR-TB
|
lineage4.9
|
None
|
ERR3283032
|
Other
|
lineage4.9
|
None
|
ERR867541
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR1035296
|
HR-TB
|
lineage4.9
|
br
|
SRR7535086
|
Other
|
|
None
|
SRR20969475
|
Other
|
lineage1.2.1.2
|
None
|
SRR6046376
|
Other
|
lineage3
|
None
|
SRR5341267
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
SRR11342698
|
RR-TB
|
lineage4.4.1.1
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR11081258
|
Other
|
lineage4.8
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR11049020
|
Other
|
lineage4.8
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
SRR14802079
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR4769552
|
Sensitive
|
La1.3
|
None
|
SRR5341453
|
Other
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR1035122
|
Sensitive
|
lineage4.9
|
None
|
SRR3675518
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
SRR7535047
|
RR-TB
|
lineage4.6.1.1
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR176643
|
Other
|
La3;lineage4.9
|
None
|
SAMN02380982
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4821616
|
Other
|
lineage1.1.3.1
|
None
|
ERR3290633
|
Other
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR369160
|
Sensitive
|
lineage4.9
|
None
|
ERR363445
|
Other
|
lineage4.9
|
None
|
SRR6046250
|
Other
|
lineage4.9
|
None
|
ERR158583
|
MDR-TB
|
La3;M.canetti;lineage2;lineage4.2;lineage4.3
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
ERR3797062
|
RR-TB
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR1023509
|
Other
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
SRR14334194
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR867522
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5007168
|
Other
|
lineage4.8.2;lineage4.9
|
None
|
ERR867566
|
Other
|
lineage4.9
|
None
|
DRR185024
|
Other
|
lineage2.2.2
|
None
|
SRR6045050
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR11466499
|
Other
|
lineage4.3.4.1
|
None
|
ERR2886463
|
Sensitive
|
lineage2.2.1
|
None
|
SRR18002935
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR1173740
|
Other
|
lineage3;lineage4
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
SRR12416840
|
MDR-TB
|
lineage4.9
|
None
|
ERR702404
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR8025636
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR16156697
|
RR-TB
|
lineage2.2.1
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
SRR18002964
|
Other
|
lineage2.2.1
|
None
|
SRR6045519
|
MDR-TB
|
M.canetti;lineage4.9
|
None
|
SRR1184329
|
Other
|
lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR3675488
|
Other
|
La1.7;lineage4.9
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR11465353
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR11465711
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
SRR18003032
|
Other
|
lineage2.2.1
|
None
|
ERR11465360
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR11342647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR18003033
|
Other
|
lineage2.2.1
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR29050859
|
Other
|
lineage4.9
|
None
|
SRR11342676
|
HR-TB
|
lineage4.6.2.2
|
None
|
ERR5311096
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4769419
|
Sensitive
|
lineage4.9
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
ERR736834
|
Sensitive
|
lineage4.9
|
None
|
ERR373946
|
Sensitive
|
lineage4.9
|
None
|
SRR1173185
|
Other
|
lineage4.9
|
None
|
SRR16278274
|
Other
|
La1.4
|
None
|
ERR212125
|
HR-TB
|
lineage4.9
|
None
|
SRR3675527
|
Other
|
lineage4.9
|
None
|
SRR9971112
|
Other
|
lineage2.2.1
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
SRR7645972
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR18002908
|
Other
|
lineage2.2.1
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR403298
|
MDR-TB
|
M.canetti;lineage4.2
|
None
|
SRR5341396
|
Other
|
lineage3;lineage4.9
|
None
|
ERR323033
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2513121
|
Sensitive
|
lineage3.1.3
|
None
|
ERR323054
|
MDR-TB
|
La3;M.canetti;lineage3.1
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR2851356
|
Sensitive
|
lineage4.9
|
None
|
ERR323038
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1062918
|
Other
|
lineage3
|
None
|
SRR11342655
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR4820586
|
Other
|
lineage3
|
gb
|
ERR386953
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769514
|
Other
|
La1.3
|
None
|
SRR11662690
|
HR-TB
|
lineage4.9
|
None
|
SRR11342664
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR5341469
|
HR-TB
|
lineage4.9
|
None
|
ERR4769555
|
Sensitive
|
La1.3
|
None
|
ERR4819166
|
Other
|
lineage3
|
gb
|
SRR18002987
|
Other
|
lineage2.2.1
|
None
|
ERR11465510
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR19303899
|
Other
|
lineage3
|
None
|
ERR4797264
|
Sensitive
|
lineage4.9
|
None
|
ERR9119096
|
RR-TB
|
lineage4.3.3
|
None
|
ERR4831621
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR363456
|
Sensitive
|
lineage4.9
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786843
|
Other
|
|
None
|
SRR21686597
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR11252612
|
Other
|
La3;lineage4.9
|
None
|
SRR3675554
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR25827682
|
Other
|
|
None
|
SRR11349207
|
RR-TB
|
lineage2.2.1
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR6325442
|
HR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
ERR234659
|
Other
|
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR369159
|
Sensitive
|
lineage4.9
|
None
|
ERR13432057
|
Other
|
lineage4.3.3
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR4819175
|
Other
|
lineage4.1.1.3
|
gb
|
SRR10808730
|
Other
|
lineage4.9
|
None
|
SRR1173770
|
Other
|
lineage4.9
|
None
|
SRR11342646
|
HR-TB
|
lineage3
|
None
|
ERR126600
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR181824
|
HR-TB
|
lineage4.9
|
None
|
ERR369156
|
Sensitive
|
lineage4.9
|
None
|
ERR4769418
|
Other
|
La1.2
|
None
|
ERR4818851
|
RR-TB
|
lineage4.4.1.1
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR1173281
|
Other
|
lineage3
|
None
|
SRR13423546
|
Other
|
lineage4.4.2
|
None
|
SRR1175491
|
MDR-TB
|
lineage4.3.4.1
|
None
|
SRR3675502
|
Sensitive
|
lineage4.9
|
None
|
ERR176549
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR176778
|
HR-TB
|
lineage4.9
|
None
|
ERR212034
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR349330
|
Sensitive
|
lineage4.9
|
None
|
ERR6866022
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR736875
|
HR-TB
|
lineage4.9
|
None
|
ERR10796597
|
Other
|
lineage4.3.3
|
None
|
SRR15508556
|
Other
|
lineage4.3.4.1
|
None
|
SRR11342693
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR1167384
|
Other
|
La3;lineage4.9
|
None
|
ERR4769530
|
RR-TB
|
lineage4.9
|
None
|
SRR18002981
|
Other
|
lineage2.2.1
|
None
|
SRR22424778
|
RR-TB
|
lineage2.2.1.1
|
None
|
SRR6046343
|
Other
|
lineage2.2.1
|
None
|
ERR6358837
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR171142
|
Other
|
lineage3.1.1;lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
ERR9117788
|
Other
|
lineage3
|
None
|
ERR363499
|
Sensitive
|
lineage4.9
|
None
|
SRR11342643
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR3675464
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3;lineage8
|
None
|
ERR11466044
|
Other
|
lineage4.1.1.3
|
None
|
SRR5007193
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR29096900
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
ERR4816904
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR323037
|
Other
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR6358951
|
Sensitive
|
lineage4.9
|
None
|
ERR8975532
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
SRR13583478
|
HR-TB
|
lineage4.3.4.1
|
None
|
SRR12416842
|
HR-TB
|
lineage4.9
|
None
|
ERR3468488
|
Other
|
La1.8.1
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR363502
|
Other
|
lineage4.9
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR11342644
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
SRR3619841
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR5341308
|
Sensitive
|
lineage4.9
|
None
|
ERR323055
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR10762248
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9806975
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR176751
|
Other
|
lineage4.9
|
None
|
ERR12015083
|
Other
|
La3;lineage4.8
|
None
|
ERR4831117
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
SRR18002994
|
MDR-TB
|
lineage4.2.2
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
SRR28351442
|
HR-TB
|
lineage3.1
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
ERR363447
|
Other
|
lineage4.9
|
None
|
ERR752012
|
HR-TB
|
lineage1.1.1.1
|
None
|
SRR6045706
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|
ERR9786346
|
Sensitive
|
lineage4.3.4.2
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR2229542
|
Other
|
lineage4.8
|
None
|
SRR18002999
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4769452
|
Other
|
lineage4.9
|
None
|
ERR13285305
|
Other
|
lineage4.9
|
None
|
ERR11465189
|
RR-TB
|
lineage4.9.1
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
ERR6358991
|
HR-TB
|
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
|
None
|
ERR11465511
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR349266
|
Sensitive
|
lineage4.9
|
None
|
SRR1792022
|
Other
|
La1.8.1
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR369157
|
Sensitive
|
lineage4.9
|
None
|
ERR266124
|
Other
|
M.canetti
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR1510066
|
RR-TB
|
lineage1.2.1.2.1
|
None
|
ERR8976043
|
HR-TB
|
lineage2.1;lineage2.2;lineage6.3
|
None
|
SRR5341298
|
Sensitive
|
lineage4.9
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
ERR9787030
|
RR-TB
|
lineage6.1.2
|
None
|
SRR5341418
|
Other
|
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
ERR867571
|
Other
|
lineage4.9
|
None
|
SRR23961549
|
Other
|
La1.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
ERR5908228
|
RR-TB
|
lineage4.3.3
|
None
|
SRR6046225
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR6079962
|
HR-TB
|
lineage2.2.1.1
|
None
|
ERR10796598
|
Other
|
lineage4.9
|
None
|
ERR4024991
|
Other
|
lineage4.8;lineage4.9
|
None
|
ERR473334
|
HR-TB
|
lineage4.9
|
None
|
ERR736831
|
Other
|
lineage4.9
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR1165584
|
Other
|
lineage4.1.2.1
|
None
|
ERR4811493
|
HR-TB
|
lineage4.9
|
None
|
SRR20970016
|
Other
|
lineage2.2
|
None
|
SRR1180996
|
Sensitive
|
lineage4.9
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
ERR11252558
|
Other
|
lineage4.6.3;lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR7070144
|
Other
|
lineage4.8
|
None
|
ERR6359070
|
Sensitive
|
lineage4.9
|
None
|
ERR176560
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR6325448
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR11252664
|
Other
|
lineage2.2.1
|
None
|
SRR1181368
|
Other
|
lineage4.9
|
None
|
SRR28044634
|
Other
|
lineage3
|
None
|
ERR212001
|
HR-TB
|
|
None
|
ERR212033
|
Other
|
lineage4.9
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR6359045
|
Other
|
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR18003024
|
RR-TB
|
lineage2.2.1
|
None
|
SRR18913779
|
Sensitive
|
lineage3
|
None
|
SRR7755649
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR11465714
|
Other
|
lineage1.2.2.1;lineage4.4.1.1
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR363446
|
Sensitive
|
lineage4.9
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR4819462
|
Sensitive
|
lineage4.9
|
None
|
ERR7911670
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
SRR18003002
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR3675539
|
HR-TB
|
lineage4.9;lineage7
|
None
|
SRR9971372
|
MDR-TB
|
lineage4.1.1.1
|
None
|
SRR28119827
|
Other
|
La3;lineage4.9
|
None
|
ERR1035300
|
HR-TB
|
lineage4.1.2.1
|
br
|
ERR323047
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4769550
|
Sensitive
|
La1;lineage4.9
|
None
|
ERR4797474
|
Sensitive
|
lineage4.9
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR18003045
|
Other
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
ERR2513405
|
Other
|
lineage2.2.1
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR7131061
|
Other
|
lineage2.2.1
|
None
|
ERR13292527
|
Other
|
lineage4.9
|
None
|
ERR133986
|
Other
|
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
|
None
|
ERR867544
|
Other
|
lineage4.9
|
None
|
ERR867570
|
RR-TB
|
lineage4.9
|
None
|
ERR2693252
|
Sensitive
|
lineage4.9
|
None
|
SRR6045217
|
Sensitive
|
lineage4.9
|
None
|
ERR970445
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3275196
|
Other
|
lineage2.2.1
|
nl
|
ERR323060
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
SRR1196566
|
Other
|
lineage4.9
|
None
|
ERR3797016
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR21732980
|
Other
|
lineage4.3.3
|
None
|
SRR3675232
|
Other
|
lineage4.1.2.1
|
None
|
ERR3806850
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR323044
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR7535082
|
Sensitive
|
lineage4.9
|
None
|
SRR18289200
|
Other
|
lineage4.9
|
None
|
SRR21240055
|
Other
|
lineage4.1.2.1
|
None
|
ERR4816322
|
Other
|
lineage4.9
|
None
|
ERR1034652
|
Other
|
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
|
None
|
SRR11349147
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR1049677
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
SRR1175472
|
RR-TB
|
lineage4.3.4.1
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR14782539
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR13285304
|
Other
|
lineage4.9
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
ERR2513082
|
Other
|
lineage4.1.2.1
|
gb
|
SRR1049560
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
SRR18002874
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7131149
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR10430377
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6866547
|
Other
|
La1.7;lineage4.9;lineage6
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
ERR323066
|
Sensitive
|
lineage4.9
|
None
|
ERR2513724
|
Sensitive
|
lineage4.3.2.1
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR7645906
|
Other
|
lineage2.2.1
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
ERR2693229
|
RR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR11252599
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
SRR6046611
|
Sensitive
|
lineage4.9
|
None
|
SRR1165506
|
Other
|
lineage4.1.2.1
|
None
|
ERR363453
|
Sensitive
|
lineage4.9
|
None
|
SRR5007161
|
RR-TB
|
lineage4.1.1.3.1;lineage4.9
|
None
|
ERR323063
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2026698
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR18002891
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4769421
|
Other
|
La1.2
|
None
|
SRR9971041
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR10315556
|
Sensitive
|
lineage2.2.1
|
None
|
ERR867568
|
Other
|
lineage2.2.1;lineage4
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR278594
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
SRR3675515
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
DRR184629
|
Other
|
lineage2.2.1
|
None
|
DRR188519
|
Other
|
lineage4.4.2
|
None
|
ERR363509
|
Sensitive
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
ERR4769436
|
Other
|
La1.3
|
None
|
ERR126618
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR18002881
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4797201
|
Other
|
lineage1.2.2.2
|
None
|
ERR245794
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
SRR13423544
|
Other
|
lineage4.5
|
None
|
SRR28868489
|
Other
|
lineage2.2.1
|
None
|
SRR6325444
|
MDR-TB
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
ERR5311077
|
Other
|
La1.8.1
|
None
|
SRR11342638
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4818831
|
Other
|
lineage3
|
None
|
SRR7236330
|
Other
|
La1.8.1
|
None
|
ERR176766
|
HR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR2026696
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR11342696
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
ERR126597
|
HR-TB
|
lineage4.4.1.2
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
SRR14782405
|
HR-TB
|
lineage4.9
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR3445487
|
Other
|
La1.7.X-unk4
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
SRR1180446
|
Other
|
lineage4.9
|
None
|
ERR3445501
|
HR-TB
|
La1.7.1;La1.7.X-unk4;lineage7
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR373947
|
Other
|
lineage4.9
|
None
|
SRR5341467
|
Other
|
lineage4.9
|
None
|
ERR4799513
|
HR-TB
|
lineage2.2
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
SRR8758877
|
MDR-TB
|
lineage4.1.1.1
|
None
|
DRR188816
|
Sensitive
|
lineage4.2.2
|
None
|
SRR1062928
|
Other
|
lineage4.1.2.1;lineage4.9
|
None
|
SRR11972367
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4819383
|
RR-TB
|
lineage4.9
|
None
|
ERR4819864
|
RR-TB
|
lineage1.1.3.1
|
None
|
ERR779852
|
Sensitive
|
lineage4.9
|
None
|
SRR1915485
|
Other
|
La1.2.BCG
|
None
|
ERR970413
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR037504
|
Other
|
lineage4.9.1
|
None
|
ERR502517
|
Other
|
lineage5.1.1
|
None
|
SRR6785281
|
Other
|
lineage4.2.1.1
|
None
|
SRR1062871
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1196478
|
Other
|
lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
ERR3077978
|
RR-TB
|
lineage1.1
|
None
|
SRR18002998
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR21469202
|
Other
|
La1.7.1
|
None
|
SRR7131195
|
Other
|
lineage2.2.1
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2041725
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR6359082
|
Other
|
lineage4.9
|
None
|
ERR1873393
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR5341299
|
HR-TB
|
lineage4.9
|
None
|
ERR867573
|
Other
|
lineage4.9
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4818110
|
Sensitive
|
lineage4.9
|
None
|
ERR245675
|
Sensitive
|
lineage1.1.2
|
None
|
ERR3283006
|
RR-TB
|
lineage4.9
|
None
|
SRR1792011
|
Other
|
La1.8.1
|
None
|
ERR323041
|
HR-TB
|
M.canetti;lineage2.1
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR349296
|
Sensitive
|
lineage4.9
|
None
|
ERR4819863
|
RR-TB
|
lineage4.9
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1735598
|
RR-TB
|
lineage4.9
|
None
|
SRR18003023
|
Other
|
lineage2.2.1
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
SRR1049582
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR9971333
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
ERR473314
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1049559
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR11465024
|
Other
|
lineage4.1.1.3
|
None
|
SRR29093105
|
Other
|
lineage2.2.2;lineage4
|
None
|
ERR124652
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
ERR349264
|
Sensitive
|
lineage4.9
|
None
|
ERR4769497
|
Other
|
La1;lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
ERR867521
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9119483
|
Pre-XDR-TB
|
lineage5.2
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
SRR11342671
|
RR-TB
|
lineage4.1.3
|
None
|
SRR11342673
|
RR-TB
|
lineage4.3.4.2
|
None
|
SRR12062533
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR12634609
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR19295647
|
Sensitive
|
lineage4.9
|
None
|
ERR3445502
|
Sensitive
|
lineage4.9;lineage7
|
None
|
ERR3470647
|
Other
|
lineage3
|
None
|
ERR9786525
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
SRR7240492
|
HR-TB
|
La1.7.1
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1175507
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1049726
|
Other
|
lineage4.1.2.1;lineage4.4.1.1
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1640750
|
Other
|
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4831545
|
XDR-TB
|
M.canetti;lineage2.2
|
None
|
SRR29050928
|
Other
|
lineage4.9
|
None
|
SRR23961558
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR11466339
|
RR-TB
|
lineage2.2.1
|
None
|
SRR18002930
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3077969
|
Other
|
La1.3
|
None
|
ERR323062
|
Sensitive
|
lineage4.9
|
None
|
ERR3275190
|
Other
|
lineage3
|
nl
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
ERR4407463
|
HR-TB
|
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR9786911
|
HR-TB
|
lineage4.1.2.1
|
None
|
ERR10762495
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1173170
|
Other
|
lineage4.9
|
None
|
SRR11342662
|
MDR-TB
|
lineage4.8.1
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR25827418
|
XDR-TB
|
lineage3.1;lineage9
|
None
|
SRR3675507
|
Other
|
lineage4.9
|
None
|
ERR11252736
|
Other
|
lineage4.9
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
ERR387051
|
Other
|
lineage4.9
|
None
|
ERR4816610
|
Other
|
lineage4.3.3
|
None
|
ERR10219876
|
Other
|
lineage4.3.4.2
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1172807
|
Sensitive
|
lineage4.9
|
None
|
ERR161034
|
HR-TB
|
lineage4.3.4.2.1
|
None
|
SRR11342640
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR1180440
|
Other
|
lineage4.9
|
None
|
ERR369163
|
Sensitive
|
lineage4.9
|
None
|
ERR11465597
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR19303820
|
RR-TB
|
lineage4.8
|
None
|
SRR3619764
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR7645977
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR363498
|
Sensitive
|
lineage4.9
|
None
|
SRR21469200
|
Other
|
La1.7.1
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
ERR4872102
|
MDR-TB
|
lineage4.6.4
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR5311081
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675265
|
Other
|
lineage4
|
None
|
SRR18002974
|
Other
|
lineage2.2.1
|
None
|
SRR1735596
|
RR-TB
|
lineage4.9
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR323034
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage3.1
|
None
|
SRR18002933
|
Other
|
lineage2.2.1
|
None
|
ERR8665994
|
Other
|
lineage4.9
|
None
|
SRR5535933
|
Other
|
lineage4.9
|
None
|
ERR2026695
|
MDR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
|
None
|
ERR9786592
|
Other
|
lineage4.3.4.2
|
None
|
ERR10796564
|
Other
|
lineage4.3.3
|
None
|
SRR5007167
|
RR-TB
|
lineage4.1.1.3.1
|
None
|
SRR6045071
|
Other
|
lineage4.3.1.1
|
None
|
ERR124651
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR11972425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6046210
|
Other
|
lineage4.9
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR5341400
|
Sensitive
|
lineage4.9
|
None
|
ERR12015086
|
RR-TB
|
lineage4.8
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
SRR7617847
|
Other
|
La1.8.1
|
None
|
ERR6358979
|
Other
|
lineage4.9
|
None
|
SRR7131123
|
Other
|
lineage4.8
|
None
|
SRR6046117
|
Other
|
lineage4.9
|
None
|
ERR10796589
|
Other
|
lineage4.9
|
None
|
ERR3806588
|
Other
|
lineage6.1.3
|
None
|
SRR7070320
|
Other
|
lineage4.8
|
None
|
SRR3675495
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR11342687
|
RR-TB
|
lineage4.2.2.2
|
None
|
ERR1665404
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
DRR184982
|
Other
|
lineage2.2.1
|
None
|
ERR702405
|
Sensitive
|
lineage4.9
|
None
|
SRR3675231
|
MDR-TB
|
lineage4.9;lineage7
|
None
|
ERR987765
|
Sensitive
|
lineage4.6.1.1
|
None
|
ERR126608
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR363506
|
Sensitive
|
lineage4.9
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR736863
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4769408
|
Other
|
La1.3
|
None
|
ERR176741
|
Other
|
lineage4.9
|
None
|
ERR867569
|
Other
|
lineage4.9
|
None
|
SRR1165628
|
Other
|
La3;lineage4.9
|
None
|
SRR11342642
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR2027257
|
Other
|
lineage4.1.2.1
|
None
|
ERR5917972
|
MDR-TB
|
lineage4.4.1.1
|
za
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR867567
|
RR-TB
|
lineage3
|
None
|
ERR1035297
|
MDR-TB
|
lineage4.3.4.1
|
br
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
ERR1873396
|
Pre-XDR-TB
|
M.canetti;lineage2.2
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
ERR9786276
|
Sensitive
|
lineage4.8
|
None
|
SRR3675486
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR736839
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
SRR18002984
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR23310833
|
MDR-TB
|
lineage4.2.1
|
None
|
ERR9786526
|
Other
|
lineage4.1;lineage4.8
|
None
|
SRR6045503
|
Sensitive
|
lineage4.9
|
None
|
ERR4796254
|
Sensitive
|
lineage4.9
|
None
|
SRR6046141
|
Other
|
lineage4.9
|
None
|
SRR1049725
|
Other
|
lineage4.1.2.1;lineage4.4.1
|
None
|
SRR1140736
|
Other
|
lineage4.1.2.1
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR4817915
|
Other
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR12062493
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR18003030
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827507
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR363500
|
Sensitive
|
lineage4.9
|
None
|
SRR29051093
|
Other
|
lineage4.9
|
None
|
SRR7236177
|
Other
|
La1.8.1
|
None
|
ERR10796591
|
Other
|
lineage4.9
|
None
|
SRR29051043
|
Other
|
lineage4.3.3
|
None
|
SRR6045832
|
Other
|
lineage4.9
|
None
|
ERR038268
|
HR-TB
|
La3;M.canetti;lineage4.8;lineage4.9
|
None
|
SRR18002947
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3797023
|
HR-TB
|
La1.8.1
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR9787165
|
Other
|
lineage6.1.3
|
None
|
SRR1158918
|
Sensitive
|
lineage4.9
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
SRR13861288
|
Other
|
lineage4.9
|
None
|
SRR13861510
|
Other
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
SRR7645928
|
Other
|
lineage4.7
|
None
|
SRR1196768
|
MDR-TB
|
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR176658
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR181744
|
HR-TB
|
La3;lineage4.9
|
None
|
ERR12015084
|
Other
|
lineage4.8
|
None
|
ERR266125
|
Other
|
La3;M.canetti
|
None
|
ERR1199132
|
Sensitive
|
lineage4.6.1.1
|
None
|
SRR3675222
|
Other
|
La1.7
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR369162
|
Other
|
lineage4.9
|
None
|
SRR3675508
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR10808668
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7755657
|
Other
|
lineage4.8
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR1035239
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR5341373
|
Other
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
ERR736872
|
HR-TB
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR1213873
|
MDR-TB
|
lineage4.3.4.2.1
|
rw
|
ERR4798431
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7069922
|
Other
|
lineage2.2.1
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR18003015
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2027209
|
MDR-TB
|
lineage1.2.1.1
|
None
|
SRR18003004
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR867527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18912069
|
Other
|
lineage4.1.2.1
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
ERR4819357
|
Sensitive
|
lineage4.9
|
None
|
SRR7069347
|
Other
|
lineage4.1.2.1
|
None
|
SRR11342658
|
RR-TB
|
lineage4.1.2
|
None
|
SRR11342668
|
Pre-XDR-TB
|
lineage4.8.1
|
None
|
ERR323058
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
SRR29772570
|
Other
|
lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
SRR18002941
|
RR-TB
|
lineage2.2.1
|
None
|
ERR3283026
|
HR-TB
|
lineage4.2;lineage4.6.3;lineage4.9.1
|
None
|
ERR3797080
|
Sensitive
|
lineage4.9
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
SRR1173687
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR369158
|
Other
|
lineage4.9
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
ERR294248
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR502474
|
RR-TB
|
lineage4.9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR550636
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR4831620
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR11349211
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1184298
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR18003019
|
Other
|
lineage2.2.1
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR22175249
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3797083
|
RR-TB
|
lineage4.9
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
SRR5341296
|
Sensitive
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
SRR1791747
|
Other
|
La1.8.1
|
None
|
SRR20969708
|
HR-TB
|
lineage2.2
|
None
|
SRR28393898
|
Other
|
lineage4.4.1
|
None
|
SRR3675552
|
Other
|
lineage4.9
|
None
|
ERR323036
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
SRR3675492
|
Other
|
La1.7;lineage4.9
|
None
|
ERR124642
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
ERR4178309
|
Other
|
lineage4.1.2.1
|
None
|
ERR11466072
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR5341310
|
Other
|
lineage1.1.2
|
None
|
ERR4769427
|
Other
|
La1.2
|
None
|
ERR2026697
|
HR-TB
|
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
|
None
|
SRR5341341
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR867575
|
Other
|
lineage4.9
|
None
|
ERR363490
|
Sensitive
|
lineage4.9
|
None
|
SRR6325445
|
HR-TB
|
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
|
None
|
ERR4831617
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4819579
|
HR-TB
|
lineage4.3.3
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR13180363
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR10869071
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR4799547
|
HR-TB
|
lineage2.2.1
|
None
|
SRR10303325
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR5341300
|
HR-TB
|
lineage4.9
|
None
|
ERR363479
|
Sensitive
|
lineage4.9
|
None
|
ERR369161
|
Sensitive
|
lineage4.9
|
None
|
SRR21658550
|
Other
|
lineage1.1.1
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
SRR3675448
|
Other
|
lineage4.9
|
None
|
SRR11342682
|
Other
|
lineage4.1.2
|
None
|
SRR7755645
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
SRR7131147
|
Other
|
lineage4.1.2.1
|
None
|
ERR1035138
|
MDR-TB
|
lineage2.1;lineage4.9
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
SRR7645927
|
Other
|
lineage4.8
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR736856
|
Sensitive
|
lineage4.9
|
None
|
SRR14782054
|
Other
|
lineage4.9
|
None
|
ERR181887
|
Other
|
lineage4.9
|
None
|
SRR5818647
|
Other
|
lineage4.3.4.2.1
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
ERR1063855
|
Other
|
lineage4.9
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
SRR13861381
|
HR-TB
|
lineage4.9
|
None
|
SRR11342651
|
MDR-TB
|
lineage4.1.1.1
|
None
|
ERR1063883
|
HR-TB
|
lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
ERR363426
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR405219
|
HR-TB
|
La1.7;lineage3.1;lineage4
|
None
|
ERR3797019
|
Other
|
La1.8.1
|
None
|
ERR867554
|
Other
|
lineage4.3.4.1
|
None
|
SRR6045516
|
Other
|
lineage3.1.1
|
None
|
SRR19304104
|
Other
|
lineage4.8
|
None
|
SRR3675548
|
Sensitive
|
lineage4.9
|
None
|
SRR3675245
|
Other
|
lineage4.1.2.1
|
None
|
ERR363474
|
Sensitive
|
lineage4.9
|
None
|
ERR161033
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
SRR13888750
|
Other
|
La2
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4769457
|
Other
|
lineage4.9
|
None
|
ERR4797184
|
Sensitive
|
lineage4.9
|
None
|
ERR124636
|
Sensitive
|
lineage4.9
|
None
|
ERR161039
|
HR-TB
|
La3;lineage4.3.4
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR10796572
|
Other
|
lineage4.3.4.1;lineage4.9
|
None
|
ERR4872119
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
SRR15014655
|
Other
|
M.canetti;lineage1
|
None
|
ERR3797036
|
HR-TB
|
lineage2.1;lineage4.1.4;lineage4.9
|
None
|
SRR3675248
|
Other
|
lineage4.9
|
None
|
SRR10808399
|
Sensitive
|
lineage4.9
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR502478
|
RR-TB
|
lineage4.9
|
None
|
SRR6325447
|
MDR-TB
|
lineage2.1;lineage4.1.1.1;lineage6.3
|
None
|
ERR867540
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6789624
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR11342653
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6046720
|
HR-TB
|
lineage4.9;lineage9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR7070329
|
Other
|
lineage3
|
None
|
SRR18003046
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6511621
|
Sensitive
|
lineage4.9
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
ERR176568
|
HR-TB
|
La3;lineage2.1;lineage4.9
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
ERR2693239
|
RR-TB
|
M.canetti;lineage2.1;lineage4
|
None
|
SRR11342649
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR18003013
|
Pre-XDR-TB
|
lineage4.4.2
|
None
|
SRR1140574
|
MDR-TB
|
lineage4.3.3;lineage4.8
|
None
|
ERR1063896
|
Sensitive
|
|
None
|
SRR18003042
|
Other
|
lineage2.2.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29055629
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR9787336
|
RR-TB
|
lineage6.1.3
|
None
|
ERR867524
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR369151
|
Other
|
lineage4.9
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR502481
|
RR-TB
|
lineage4.9
|
None
|
SRR21727760
|
Other
|
lineage2.2.1
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR5341313
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR11662696
|
MDR-TB
|
La1.6;La3;M.canetti;lineage4.2.2
|
None
|
ERR4872077
|
Pre-XDR-TB
|
lineage5.2
|
None
|
SRR1159378
|
Other
|
lineage4.9
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR3675482
|
Other
|
lineage4.9
|
None
|
SRR1140753
|
RR-TB
|
lineage4.3.4.2.1
|
None
|
ERR4822138
|
Other
|
lineage4.1.2.1
|
None
|
ERR9119508
|
MDR-TB
|
lineage4.6.4
|
None
|
ERR4769554
|
RR-TB
|
lineage4.9
|
None
|
SRR11342669
|
Other
|
lineage4.8
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173355
|
Other
|
lineage4.9
|
None
|
ERR9786627
|
Other
|
lineage4.1.2.1
|
None
|
ERR4815022
|
Other
|
lineage3.1.2.1
|
None
|
SRR7755655
|
Other
|
lineage4.1.2.1
|
None
|
SRR15316595
|
RR-TB
|
lineage4.4.2
|
None
|
ERR4188247
|
HR-TB
|
lineage4.9
|
None
|
SRR5341432
|
Sensitive
|
La1.7;lineage4.9;lineage7
|
None
|
SRR6045957
|
Other
|
lineage4.9
|
None
|
ERR5311100
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR7069800
|
Other
|
lineage3.1.2.1
|
None
|
SRR7645899
|
Other
|
lineage2.2.1
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR7069835
|
Other
|
lineage2.2.1
|
None
|
SRR3675292
|
Sensitive
|
lineage4.9
|
None
|
SRR18909918
|
Other
|
lineage2.2.1.1
|
None
|
ERR3797028
|
HR-TB
|
M.canetti;lineage4.9
|
None
|
ERR6866410
|
Sensitive
|
lineage4.9
|
None
|
SRR3618864
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2124083
|
HR-TB
|
lineage4.6.1.2
|
None
|
ERR867538
|
Other
|
lineage4.2.2.2
|
None
|
ERR2693228
|
RR-TB
|
lineage4.9
|
None
|
SRR20969731
|
Other
|
lineage2.2.1
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR13292526
|
Other
|
lineage4.9
|
None
|
SRR6045548
|
Sensitive
|
lineage4.9
|
None
|
ERR4818272
|
Other
|
lineage4.3.2
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
SRR16156832
|
RR-TB
|
lineage2.2;lineage4
|
None
|
SRR12708371
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
ERR323040
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR3601585
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18002963
|
Other
|
lineage2.2.1
|
None
|
ERR349300
|
Sensitive
|
lineage4.9
|
None
|
ERR363421
|
Sensitive
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR11466146
|
Other
|
lineage4.3.4.2.1
|
None
|
SRR6045267
|
RR-TB
|
lineage4.8
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR5007169
|
RR-TB
|
lineage4.8.2
|
None
|
ERR108125
|
RR-TB
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
ERR867574
|
Other
|
lineage4.9
|
None
|
ERR323115
|
Sensitive
|
lineage4.9
|
None
|
ERR1035294
|
MDR-TB
|
lineage4.1.2.1
|
br
|
ERR4799025
|
Other
|
lineage4.8
|
None
|
SRR6046492
|
Other
|
lineage4.9
|
None
|
ERR2446509
|
Other
|
lineage3
|
nl
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
ERR4831616
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7755688
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
ERR4769508
|
RR-TB
|
lineage4.9
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR16156775
|
Other
|
lineage4.9
|
None
|
ERR9787256
|
Other
|
lineage6.1.3
|
None
|
SRR18002976
|
Other
|
lineage2.2.1
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR11342691
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18910194
|
HR-TB
|
lineage2.2.2
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
SRR18002937
|
Other
|
lineage2.2.1
|
None
|
SRR5341384
|
HR-TB
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR11972417
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3468544
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
SRR7240033
|
Other
|
La1.2;La1.8.1
|
None
|
SRR14801749
|
HR-TB
|
lineage4.9
|
None
|
SRR3675389
|
Other
|
lineage4.9
|
None
|
SRR11342660
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR12015085
|
Other
|
lineage4.8
|
None
|
ERR11465802
|
Other
|
La1.7;lineage4.3.4.1
|
None
|
ERR11465665
|
Other
|
lineage4.1.1.3
|
None
|
ERR9119525
|
MDR-TB
|
lineage4.6.2.2
|
None
|
ERR4816852
|
Other
|
lineage4.9
|
None
|
ERR4816548
|
HR-TB
|
lineage4.5
|
None
|
SRR6982141
|
Other
|
lineage4.3.3
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
SAMEA2533358
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR161037
|
Other
|
lineage4.9
|
None
|
ERR6359069
|
Sensitive
|
lineage4.9
|
None
|
SRR3675582
|
Other
|
lineage4.9
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR6865513
|
Other
|
lineage4.1.2.1
|
None
|
SRR3675209
|
Sensitive
|
lineage4.9
|
None
|
SRR5341461
|
HR-TB
|
lineage4.9
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR2027290
|
Other
|
lineage3.1.2.1;lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR18003047
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR3797043
|
Sensitive
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR2041726
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR3675318
|
Other
|
lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6458421
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR1035162
|
Other
|
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR2446566
|
Other
|
lineage4.9
|
None
|
ERR349265
|
Other
|
lineage4.9
|
None
|
SRR16627752
|
RR-TB
|
lineage4.4
|
None
|
ERR373945
|
Sensitive
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
SRR11342686
|
MDR-TB
|
lineage4.8
|
None
|
SRR6046133
|
HR-TB
|
lineage4.9
|
None
|
SRR3675230
|
Other
|
lineage3;lineage4
|
None
|
ERR4769433
|
RR-TB
|
lineage4.9
|
None
|
SRR16156817
|
Other
|
lineage4.9
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
SRR29016901
|
Other
|
La3;lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
ERR11465628
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR5311078
|
MDR-TB
|
M.canetti;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR323064
|
MDR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4821704
|
Other
|
lineage4.3.3
|
None
|
SRR26159043
|
Other
|
lineage4.9
|
None
|
ERR4799478
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11662694
|
Other
|
lineage4.9
|
None
|
ERR11465152
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR363449
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
ERR4769450
|
Other
|
lineage4.9
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR7645901
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1175508
|
Sensitive
|
lineage4.9
|
None
|
SAMN02380990
|
MDR-TB
|
lineage4.6.1.2
|
None
|
SRR10315567
|
HR-TB
|
lineage2.2.1
|
None
|
ERR2027220
|
Sensitive
|
lineage3.1.3
|
None
|
ERR3283016
|
HR-TB
|
La3;M.canetti;lineage2.1;lineage4.9
|
None
|
ERR4816198
|
Sensitive
|
lineage4.1.3
|
None
|
ERR502473
|
RR-TB
|
lineage4.9
|
None
|
ERR4811035
|
Pre-XDR-TB
|
lineage2.2.1;lineage4.5
|
None
|
SRR1184308
|
Sensitive
|
lineage4.9
|
None
|
ERR349299
|
Other
|
lineage4.9
|
None
|
SRR9970981
|
RR-TB
|
lineage4.3.2.1
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR867572
|
Other
|
lineage4.9
|
None
|
SRR11342636
|
MDR-TB
|
lineage4.3.3
|
None
|
SRR11349186
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR867523
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969542
|
Other
|
lineage4.4.2
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|