Rv0001 - p.Met484Ile
Drug resistance types
32 Sensitive
0 RR-TB
14 HR-TB
36 MDR-TB
22 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1 | 5 |
| lineage2.2.1 | 32 |
| lineage4.8 | 6 |
| lineage4.1.1.3 | 2 |
| lineage4.3.3 | 14 |
| lineage2.2.1.2 | 3 |
| lineage4.3.2 | 1 |
| lineage3 | 2 |
| lineage4.4.1.1 | 11 |
| lineage2.2.1.1 | 2 |
| lineage1.1.3.1 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1 | 5 |
| lineage5.1.1 | 3 |
| lineage4.6 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.3.4.1 | 4 |
| lineage4.5 | 4 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage6.3.1 | 2 |
| lineage4.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.9 | 2 |
| lineage4.4.2 | 2 |
| lineage4.3 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 114 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29051385 | HR-TB | lineage1.1.1.1 | None | ERR5864724 | Pre-XDR-TB | lineage2.2.1 | None | ERR4195506 | Sensitive | lineage4.8 | None | ERR11775044 | Sensitive | lineage4.1.1.3 | None | SRR924208 | Pre-XDR-TB | lineage4.3.3 | None | ERR775373 | MDR-TB | lineage2.2.1 | pe | SRR2024883 | MDR-TB | lineage2.2.1.2 | cn | SRR2025000 | MDR-TB | lineage2.2.1.2 | cn | ERR1023495 | Sensitive | lineage4.3.2 | None | ERR1023309 | Sensitive | lineage3 | None | SRR7069442 | HR-TB | lineage2.2.1 | None | ERR5864721 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044760 | Sensitive | lineage4.4.1.1 | None | ERR551266 | Other | lineage2.2.1.1 | de | ERR4829026 | Sensitive | lineage1.1.3.1 | it | ERR4828995 | Pre-XDR-TB | lineage2.2.1 | it | ERR4828645 | HR-TB | lineage1.1.1.1 | vn | ERR4809313 | MDR-TB | lineage4.3.4.2.1 | za | ERR4828297 | MDR-TB | lineage2.2.1 | None | ERR13284464 | MDR-TB | lineage2.2.1 | None | DRR130174 | Pre-XDR-TB | lineage2.2.1 | None | ERR7362040 | Sensitive | lineage1.1.2 | None | SRR10397129 | MDR-TB | lineage2.2.1 | None | SRR833077 | Pre-XDR-TB | lineage4.3.3 | za | SRR5065204 | Sensitive | lineage2.2.1 | vn | SRR28393630 | MDR-TB | lineage4.1.2.1 | None | ERR1213891 | MDR-TB | lineage4.3.3 | co | ERR552188 | Other | lineage5.1.1 | None | ERR4830987 | Pre-XDR-TB | lineage2.2.1 | np | SRR6964654 | Other | lineage4.6 | None | SRR22251760 | Sensitive | lineage4.1.1.1 | None | SRR833064 | Pre-XDR-TB | lineage4.3.3 | None | ERR11067849 | Sensitive | lineage4.4.1.1 | None | SRR13583392 | MDR-TB | lineage4.3.4.1 | None | SRR1723626 | Sensitive | lineage2.2.1 | cn | ERR4827906 | MDR-TB | lineage2.2.1 | None | ERR5864719 | Pre-XDR-TB | lineage2.2.1 | None | ERR552187 | Other | lineage5.1.1 | None | ERR13291133 | HR-TB | lineage4.5 | None | SRR28240163 | Pre-XDR-TB | lineage2.2.1 | None | ERR1163051 | MDR-TB | lineage4.8 | None | ERR11044762 | Sensitive | lineage4.4.1.1 | None | SRR29124299 | Other | lineage4.4.1.1 | None | ERR5864720 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284473 | MDR-TB | lineage2.2.1 | None | SRR25207096 | Pre-XDR-TB | lineage4.5 | None | ERR13194183 | Sensitive | lineage2.2.2 | None | ERR10748541 | Pre-XDR-TB | lineage2.2.1 | None | SRR28868446 | Sensitive | lineage1.1.1.1 | None | ERR13284782 | MDR-TB | lineage4.8 | None | SRR29341463 | HR-TB | lineage4.4.1.1 | None | ERR13284771 | MDR-TB | lineage4.3.4.2 | None | ERR11465360 | MDR-TB | lineage4.3.4.1 | None | ERR5864722 | Pre-XDR-TB | lineage2.2.1 | None | ERR11465361 | MDR-TB | lineage4.3.4.1 | None | ERR4872336 | MDR-TB | lineage2.2.1 | None | ERR11050306 | Sensitive | lineage4.4.1.1 | None | ERR5864723 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380030 | Sensitive | lineage2.2.1 | None | SRR17657962 | MDR-TB | lineage4.3.3 | None | ERR552189 | Other | lineage5.1.1 | cg | ERR3170482 | Sensitive | lineage6.3.1 | gh | ERR3170452 | Sensitive | lineage6.3.1 | gh | ERR2516607 | MDR-TB | lineage4.1.2.1 | nl | ERR2516593 | MDR-TB | lineage4.1.2.1 | nl | ERR2516464 | MDR-TB | lineage4.1.2.1 | pe | ERR2516598 | Pre-XDR-TB | lineage4.1.1 | pe | ERR4821573 | HR-TB | lineage1.2.1.2.1 | gb | ERR2512748 | HR-TB | lineage2.2.1 | gb | SRR25827592 | Sensitive | lineage3 | None | SRR29017277 | MDR-TB | lineage2.2.1 | None | SRR28706693 | MDR-TB | lineage4.8 | None | SRR5073841 | Other | lineage1.1.1.1 | vn | SRR5074076 | Other | lineage2.2.1 | vn | SRR7516343 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810471 | Pre-XDR-TB | lineage4.5 | cn | SRR5153594 | MDR-TB | lineage4.3.3 | None | ERR4822469 | Sensitive | lineage4.4.1.1 | None | SRR13180242 | Sensitive | lineage4.8 | None | ERR11080965 | MDR-TB | lineage4.8 | None | SRR6480634 | HR-TB | lineage4.3.3 | None | SRR10808736 | HR-TB | lineage4.3.3 | None | ERR9285813 | Sensitive | lineage4.3.3 | None | SRR6356942 | MDR-TB | lineage4.3.3 | None | ERR11081914 | MDR-TB | lineage2.2.1 | None | SRR1019171 | Pre-XDR-TB | lineage4.3.3 | None | SRR23311061 | MDR-TB | lineage2.2.1 | None | ERR11081351 | MDR-TB | lineage2.2.1 | None | SAMN01925618 | Pre-XDR-TB | lineage4.3.3 | None | SRR29051207 | MDR-TB | lineage4.3.4.1 | None | ERR10748107 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446300 | HR-TB | lineage4.9 | nl | ERR3275263 | HR-TB | lineage4.9 | nl | SRR29341513 | Other | lineage4.4.1.1 | None | SAMN01925619 | Pre-XDR-TB | lineage4.3.3 | za | ERR11082222 | MDR-TB | lineage2.2.1 | None | SRR20969785 | HR-TB | lineage4.4.2 | None | SRR10040295 | MDR-TB | lineage2.2.1.1 | None | ERR11044761 | Sensitive | lineage4.4.1.1 | None | ERR3132134 | MDR-TB | lineage4.3.3 | None | DRR473855 | Sensitive | lineage4.5 | None | ERR12388766 | Sensitive | lineage4.3.4.2 | None | SRR29124327 | Other | lineage4.4.1.1 | None | SRR29881216 | Sensitive | lineage4.3 | None | SRR25395631 | Sensitive | lineage4.1.2.1 | None | SRR20969560 | Sensitive | lineage4.4.2 | None | SRR9217365 | Sensitive | lineage1.1.3.1 | None | ERR11068988 | MDR-TB | lineage4.3.4.2 | None | DRR474005 | HR-TB | lineage2.2.1 | None | ERR11050286 | Sensitive | lineage4.4.1.1 | None | ERR12311959 | Sensitive | lineage4.1.2 | None | SRR28860156 | Sensitive | lineage4.1.1.3 | None | SRR26399890 | HR-TB | lineage1.1.1.1 | None | SRR18054774 | MDR-TB | lineage2.2.1.2 | None |
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