Rv0005 - c.-55delC
Drug resistance types
23 Sensitive
0 RR-TB
3 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage6.1.3 | 1 |
| lineage4.5 | 1 |
| lineage2.2.1 | 2 |
| lineage4.8 | 6 |
| lineage3 | 6 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.3.3 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.2.2 | 1 |
| lineage1.2.1.2.1 | 2 |
| lineage4.9 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage3.1.2.1 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 33 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9787155 | Other | lineage6.1.3 | None | SRR6785490 | Sensitive | lineage4.5 | None | SRR1723837 | Sensitive | lineage2.2.1 | cn | ERR4827864 | HR-TB | lineage4.8 | None | SRR7069228 | Sensitive | lineage3 | None | ERR9786952 | Sensitive | lineage4.8 | None | SRR6152915 | Sensitive | lineage2.2.1.1 | ca | SRR7069884 | Sensitive | lineage3 | None | SRR25340841 | Sensitive | lineage1.2.2.2 | None | SRR28239800 | MDR-TB | lineage4.3.3 | None | SRR21727559 | Other | lineage4.3.3 | None | SRR6650304 | Sensitive | lineage1.1.3.1 | None | ERR2515983 | Sensitive | lineage4.4.1.1 | za | ERR2513469 | Sensitive | lineage3 | gb | SRR28044343 | Pre-XDR-TB | lineage3 | None | DRR474165 | Sensitive | lineage4.2.2 | None | SRR21663274 | Sensitive | lineage1.2.1.2.1 | None | SRR16088600 | Sensitive | lineage4.8 | None | DRR188467 | Sensitive | lineage4.9 | None | SRR29055724 | Sensitive | lineage1.2.1.2.1 | None | SRR6785453 | HR-TB | lineage2.2.1 | None | SRR12882344 | Sensitive | lineage3.1.1 | None | SRR16087999 | Sensitive | lineage4.8 | None | ERR551224 | Sensitive | lineage3 | de | SRR16088207 | Sensitive | lineage4.8 | None | SRR21240032 | HR-TB | lineage4.4.1.1 | None | SRR13423543 | Pre-XDR-TB | lineage4.8 | None | ERR11067427 | Sensitive | lineage4.1.2.1 | None | SRR21732505 | Sensitive | lineage1.1.3.2 | None | ERR4820561 | Sensitive | lineage3 | gb | ERR13266979 | Other | lineage3.1.2.1 | None | SRR23961447 | Other | La1.2 | None | ERR13245577 | Sensitive | lineage4.9 | None |
|---|
