Rv0005 - c.1931_1933delCCG


Drug resistance types
81 Sensitive 13 RR-TB 3 HR-TB 27 MDR-TB 21 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
La1.7.1 33
lineage1.2.2.2 21
lineage4.5 2
lineage2.2.1 20
lineage2.2.2 5
lineage1.1.2 24
lineage3 3
lineage4.8 14
lineage4.3.2 7
lineage4.3.4.2 1
lineage4.3.3 3
lineage2.2.1.1 5
lineage4.1.2.1 6
lineage4.4.1.1 27
lineage1.1.3.2 2
lineage4.2.1 1
lineage1.1.2;lineage4 1
lineage1.1.3 3
lineage1.1.3.1 1
lineage4 2
lineage4.3.4.1 1
lineage1.2.2.2;lineage4.3.3 1
lineage4.2.2.2 2
lineage4.1.1 2
lineage1.2.2.2;lineage2.2.1 1
lineage1.2.2.1 1
lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 1
lineage2.1 2
lineage4.6.1.1 1
lineage9 1
lineage4.1.1.3 1
lineage1.1.3.3 1
lineage1.1.1 1
1
lineage1.1.1.1 1
lineage4.1.3 1
spoligotype Counts
spoligotype Count
None 200
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR7240240 Other La1.7.1 None
SRR1791722 Other La1.7.1 None
SRR21732658 Sensitive lineage1.2.2.2 None
SRR21277049 Sensitive lineage4.5 None
SRR1792108 Other La1.7.1 None
ERR4828194 Other lineage2.2.1 vn
SRR26112635 Sensitive lineage2.2.2 None
ERR551380 MDR-TB lineage2.2.1 None
SAMN02598984 Sensitive lineage1.1.2 in
SRR5341460 Other lineage3 None
ERR9125624 Other lineage1.1.2 None
SRR1180171 Sensitive lineage1.1.2 None
SRR29274060 MDR-TB lineage4.8 None
ERR11043138 RR-TB lineage4.8 None
SRR21733101 Sensitive lineage1.2.2.2 None
ERR019574 Other lineage2.2.1 None
ERR9901075 Sensitive lineage4.3.2 None
SRR1792101 Other La1.7.1 None
SRR26112334 Other lineage4.3.4.2 None
SRR1792171 Other La1.7.1 None
SRR7240344 Other La1.7.1 None
SRR1792027 Other La1.7.1 None
SRR1791909 Other La1.7.1 None
SRR7240446 Other La1.7.1 None
SRR29056154 Sensitive lineage4.3.3 None
SRR960987 Pre-XDR-TB lineage2.2.1.1 cn
ERR11043250 Sensitive lineage4.1.2.1 None
SRR16058455 Sensitive lineage4.4.1.1 None
ERR688020 Pre-XDR-TB lineage1.2.2.2 None
SRR7069567 Sensitive lineage1.1.3.2 None
SRR29539061 Sensitive lineage4.2.1 None
SRR29231268 HR-TB lineage1.2.2.2 None
SRR1792147 Other La1.7.1 None
SRR19324802 Sensitive lineage1.2.2.2 None
SRR29016878 MDR-TB lineage1.2.2.2 None
SRR21277120 Sensitive lineage4.5 None
ERR2510548 Pre-XDR-TB lineage1.1.2;lineage4 pk
SRR7240162 Other La1.7.1 None
ERR11082564 Sensitive lineage4.1.2.1 None
SRR7069199 Other lineage4.8 None
SRR11972347 MDR-TB lineage2.2.1 None
SRR6397634 Sensitive lineage4.4.1.1 ca
SRR6397355 Sensitive lineage4.4.1.1 ca
ERR752163 Sensitive lineage1.1.3 th
ERR718458 Sensitive lineage1.1.3 th
SRR6397334 Sensitive lineage4.4.1.1 ca
SRR6397788 RR-TB lineage4.4.1.1 ca
ERR1034610 Pre-XDR-TB lineage1.2.2.2 pk
SRR2024912 Pre-XDR-TB lineage2.2.1.1 cn
ERR4828175 Other lineage2.2.1 vn
SRR16058214 RR-TB lineage1.1.2 None
ERR2516122 Sensitive lineage4.3.2 es
SRR7240532 Other La1.7.1 None
SRR29096695 Sensitive lineage1.1.2 None
SRR29772718 MDR-TB lineage1.1.3.1 None
ERR4799237 Sensitive lineage1.2.2.2 in
ERR4799528 Pre-XDR-TB lineage1.2.2.2 in
ERR4813203 Pre-XDR-TB lineage4 None
ERR1035282 MDR-TB lineage4.3.4.1 br
ERR13267589 Sensitive lineage4.1.2.1 None
SRR29051161 Other lineage2.2.1 None
SRR6479542 Other lineage1.2.2.2 None
SRR16058448 Other lineage1.1.2 None
SRR1792109 Other La1.7.1 None
SRR1183070 Sensitive lineage1.1.2 None
SRR28170742 Sensitive lineage4.3.3 None
SRR960989 Pre-XDR-TB lineage2.2.1.1 cn
SRR25827488 MDR-TB lineage1.2.2.2;lineage4.3.3 None
SRR28119759 Pre-XDR-TB lineage2.2.1 None
ERR4813107 Pre-XDR-TB lineage4 None
SRR29273849 MDR-TB lineage4.8 None
SRR29274110 MDR-TB lineage4.8 None
ERR12115320 Other lineage1.2.2.2 None
SRR29273929 MDR-TB lineage4.8 None
SRR6797852 Other lineage1.2.2.2 None
SRR7240113 Other La1.7.1 None
SRR29051079 Other lineage2.2.1 None
SRR30182343 Sensitive lineage3 None
ERR9124986 Sensitive lineage4.4.1.1 None
SRR1791858 Other La1.7.1 None
SRR1792111 Other La1.7.1 None
ERR9125857 Sensitive lineage1.1.2 None
SRR10808979 Sensitive lineage4.8 None
SRR29053473 Sensitive lineage1.2.2.2 None
SRR7240045 Other La1.7.1 None
DRR188482 Other lineage2.2.2 None
ERR13245719 Other lineage2.2.2 None
ERR551381_ERR551380 MDR-TB lineage2.2.1 None
SRR7070255 Sensitive lineage4.2.2.2 None
SRR6397642 Other lineage4.4.1.1 None
ERR9125021 Sensitive lineage4.4.1.1 None
ERR4799424 Sensitive lineage1.2.2.2 in
SRR7240529 Other La1.7.1 None
ERR6866081 Other lineage4.1.1 None
ERR9124963 Sensitive lineage1.1.2 None
SRR29273717 MDR-TB lineage4.8 None
ERR13270284 Sensitive lineage1.1.2 None
SRR25827748 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1 None
ERR4797112 Sensitive lineage1.2.2.2 in
SRR29273611 MDR-TB lineage4.8 None
SRR3724980 Sensitive lineage2.2.1 None
SRR28045485 MDR-TB lineage1.2.2.1 None
ERR4800699 MDR-TB lineage2.2.1 None
SRR7240349 Other La1.7.1 None
SRR6397429 RR-TB lineage4.4.1.1 ca
SRR6152875 Sensitive lineage4.4.1.1 ca
SRR6397587 RR-TB lineage4.4.1.1 ca
SRR25827427 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 None
SRR6397732 RR-TB lineage4.4.1.1 ca
SRR6397377 Sensitive lineage4.4.1.1 ca
SRR6397453 Sensitive lineage4.4.1.1 ca
SRR6397616 Sensitive lineage4.4.1.1 ca
ERR7911174 Pre-XDR-TB lineage2.2.1 vn
SRR2024991 Pre-XDR-TB lineage2.2.1.1 cn
SRR1710069 Sensitive lineage2.1 cn
ERR2516284 Sensitive lineage4.3.2 be
ERR2516299 Sensitive lineage4.3.2 be
ERR4821148 Sensitive lineage4.1.2.1 gb
ERR4821353 Sensitive lineage1.2.2.2 gb
ERR2513740 Sensitive lineage4.2.2.2 gb
SRR1791797 Other La1.7.1 None
ERR4831266 Sensitive lineage4.1.2.1 de
SRR1792110 Other La1.7.1 None
SRR1791959 Other La1.7.1 None
SRR29273907 MDR-TB lineage4.8 None
SRR7240536 Other La1.7.1 None
SRR1791804 Other La1.7.1 None
ERR4024776 Other lineage4.1.1 None
ERR1199071 HR-TB lineage4.6.1.1 ug
SRR7069721 Sensitive lineage1.1.2 None
ERR9899681 Sensitive lineage4.3.2 None
SRR16057970 Sensitive lineage4.4.1.1 None
ERR12565482 Sensitive lineage4.3.2 None
SRR6397818 RR-TB lineage4.4.1.1 None
ERR2514838 Other lineage4.8 gb
SRR21691025 Sensitive lineage1.2.2.2 None
SRR16058237 Sensitive lineage1.1.2 None
SRR28868537 Sensitive lineage9 None
SRR10040453 MDR-TB lineage2.2.2 None
ERR4820077 Sensitive lineage4.1.2.1 None
SRR29081607 Pre-XDR-TB lineage4.3.2 None
SRR29017421 MDR-TB lineage1.2.2.2 None
ERR11049959 Sensitive lineage1.1.2 None
SRR7240454 Other La1.7.1 None
SRR29051134 Other lineage2.2.1 None
ERR551381 MDR-TB lineage2.2.1 None
ERR245813 Sensitive lineage1.1.2 mw
ERR13291021 MDR-TB lineage2.2.2 None
ERR4828317 Other lineage2.2.1 vn
SRR21746995 MDR-TB lineage2.1 None
ERR2514636 Sensitive lineage1.1.2 gb
SRR1791714 Other La1.7.1 None
ERR2512699 Sensitive lineage1.1.2 gb
SRR6397815 Other lineage4.4.1.1 None
ERR13264917 MDR-TB lineage4.8 None
SRR16058477 Sensitive lineage1.1.2 None
SRR1792410 Other La1.7.1 None
SRR22249929 Sensitive lineage4.1.1.3 None
SRR1792409 Other La1.7.1 None
ERR688042 Pre-XDR-TB lineage1.2.2.2 None
SRR5341239 Sensitive lineage1.1.2 in
ERR1034588 Pre-XDR-TB lineage1.2.2.2 pk
SRR6785407 Sensitive lineage4.8 None
SRR29385404 RR-TB lineage2.2.1 None
SRR1172134 Sensitive lineage1.1.2 None
SRR7240063 Other La1.7.1 None
SRR29273928 Pre-XDR-TB lineage4.8 None
ERR2510338 MDR-TB lineage1.1.2 pk
SRR29017100 Pre-XDR-TB lineage1.1.3.3 None
ERR752185 HR-TB lineage1.1.1 th
SRR3085263 MDR-TB lineage2.2.1 None
SRR6397621 Sensitive lineage4.4.1.1 ca
ERR4553666 MDR-TB None
SRR6397446 RR-TB lineage4.4.1.1 ca
SRR6397582 Sensitive lineage4.4.1.1 ca
SRR6397702 Sensitive lineage4.4.1.1 ca
SRR6397783 Sensitive lineage4.4.1.1 ca
SRR6398112 RR-TB lineage4.4.1.1 ca
SRR6397419 Sensitive lineage4.4.1.1 ca
SRR6397501 RR-TB lineage4.4.1.1 ca
SRR6397491 RR-TB lineage4.4.1.1 ca
SRR2024943 Pre-XDR-TB lineage2.2.1.1 cn
SRR1792005 Other La1.7.1 None
DRR184621 Sensitive lineage1.1.1.1 None
SRR1791824 Other La1.7.1 None
ERR7902660 Sensitive lineage1.1.2 None
ERR9124967 RR-TB lineage1.1.2 None
SRR21658553 Sensitive lineage4.3.3 None
SRR3724820 Sensitive lineage2.2.1 None
SRR7236345 Other La1.7.1 None
SAMEA2533899 MDR-TB lineage2.2.1 uz
ERR551482 Sensitive lineage4.1.3 de
ERR2513459 Sensitive lineage1.1.3.2 gb
SRR29017134 MDR-TB lineage3 None
ERR212113 Sensitive lineage1.1.2 mw
SRR1169547 Sensitive lineage1.1.2 None
SRR25340981 Sensitive lineage1.1.3 None
ERR11067174 Sensitive lineage1.2.2.2 None
SRR16370636 Pre-XDR-TB lineage2.2.1 None
SRR1792118 Other La1.7.1 None