Rv0005 - c.1931_1933delCCG

Drug resistance types
72 Sensitive 14 RR-TB 3 HR-TB 11 MDR-TB 20 Pre-XDR-TB 0 XDR-TB 38 Other
lineage Counts
lineage Count
lineage1.2.2.2 16
lineage1.1.2 22
lineage2.2.1 15
lineage4.2.2.2 1
lineage3 1
lineage4.8 10
lineage4.3.2 5
lineage4.1.3 1
lineage4.1.2.1 6
lineage4.1.1.2 1
lineage4.4.1.1 26
lineage1.1.1.1 1
lineage2.2.1.1 6
lineage4.1.2 1
lineage2.2.2 2
lineage4.3.4.1 1
lineage4.1.1 2
lineage1.1.3 2
lineage1.1.1 1
lineage4. 1
lineage4.2.1 1
lineage2.1 2
La1.7.1 20
lineage4.1.1.3 1
lineage4.5 2
lineage4.3.3 1
lineage4 2
lineage4.6.1.1 1
lineage4.9 1
lineage4;lineage1.1.2 1
lineage1.1.3.2 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 66 isolates.
Statisctical support
Not enough data to calculate support.
ID Drug resistance Lineage Country iso2
ERR11067174 Sensitive lineage1.2.2.2 None
ERR2512699 Sensitive lineage1.1.2 gb
ERR2510338 MDR-TB lineage1.1.2 pk
ERR2515550 Sensitive lineage2.2.1 None
SAMEA2533899 MDR-TB lineage2.2.1 uz
ERR2513740 Sensitive lineage4.2.2.2 gb
SRR5341460 Other lineage3 None
ERR2514838 Other lineage4.8 gb
SRR5341239 Sensitive lineage1.1.2 in
ERR2514636 Sensitive lineage1.1.2 gb
ERR2516122 Sensitive lineage4.3.2 es
ERR2515088 Other lineage1.1.2 gb
ERR551482 Sensitive lineage4.1.3 de
ERR4820077 Sensitive lineage4.1.2.1 None
ERR4821040 Sensitive lineage4.1.1.2 gb
ERR2516284 Sensitive lineage4.3.2 be
ERR2516299 Sensitive lineage4.3.2 be
ERR4821077 Sensitive lineage4.1.2.1 None
SRR6398112 RR-TB lineage4.4.1.1 ca
ERR4821148 Sensitive lineage4.1.2.1 gb
ERR4821353 Sensitive lineage1.2.2.2 gb
ERR4828175 Other lineage2.2.1 vn
ERR4828317 Other lineage2.2.1 vn
SRR5817480 MDR-TB None
ERR4828194 Other lineage2.2.1 vn
SRR6397501 RR-TB lineage4.4.1.1 ca
SRR6397419 Sensitive lineage4.4.1.1 ca
SRR6397429 RR-TB lineage4.4.1.1 ca
SRR6397453 Sensitive lineage4.4.1.1 ca
SRR6397334 Sensitive lineage4.4.1.1 ca
SRR6397355 Sensitive lineage4.4.1.1 ca
SRR6397377 Sensitive lineage4.4.1.1 ca
SRR6479542 Sensitive lineage1.2.2.2 None
SRR6397446 RR-TB lineage4.4.1.1 ca
SRR6397491 RR-TB lineage4.4.1.1 ca
SRR6397587 RR-TB lineage4.4.1.1 ca
SRR6397582 Sensitive lineage4.4.1.1 ca
SRR6152875 Sensitive lineage4.4.1.1 ca
SRR6397788 RR-TB lineage4.4.1.1 ca
SRR6397634 Sensitive lineage4.4.1.1 ca
SRR6397732 RR-TB lineage4.4.1.1 ca
SRR6397616 Sensitive lineage4.4.1.1 ca
SRR6397621 Sensitive lineage4.4.1.1 ca
SRR6397642 RR-TB None
SRR6397702 Sensitive lineage4.4.1.1 ca
SRR6397783 Sensitive lineage4.4.1.1 ca
SRR6397818 RR-TB lineage4.4.1.1 None
SRR6397815 Other lineage4.4.1.1 None
DRR184621 Sensitive lineage1.1.1.1 None
ERR4831266 Sensitive lineage4.1.2.1 de
SRR6785407 Sensitive lineage4.8 None
SRR6797852 Other lineage1.2.2.2 None
SRR6855794 Sensitive lineage2.2.1 None
SRR960987 Pre-XDR-TB lineage2.2.1.1 cn
SRR960989 Pre-XDR-TB lineage2.2.1.1 cn
SRR7517740 HR-TB lineage4.1.2 ch
ERR1034610 Pre-XDR-TB lineage1.2.2.2 pk
DRR188482 Other lineage2.2.2 None
ERR019574 Other lineage2.2.1 None
ERR1034588 Pre-XDR-TB lineage1.2.2.2 pk
ERR11043250 Sensitive lineage4.1.2.1 None
ERR1035282 MDR-TB lineage4.3.4.1 br
ERR11043138 RR-TB lineage4.8 None
ERR4553666 MDR-TB None
ERR4024776 Other lineage4.1.1 None
ERR4553614 Pre-XDR-TB None
ERR4553537 MDR-TB lineage1.2.2.2 None
ERR4797112 Sensitive lineage1.2.2.2 in
ERR4799424 Sensitive lineage1.2.2.2 in
ERR4798682 Pre-XDR-TB lineage2.2.1.1 in
ERR4799237 Sensitive lineage1.2.2.2 in
ERR4800699 MDR-TB lineage2.2.1 None
ERR4799528 Pre-XDR-TB lineage1.2.2.2 in
ERR688020 Pre-XDR-TB lineage1.2.2.2 None
ERR5987372 Pre-XDR-TB lineage2.2.2 None
ERR6866081 Other lineage4.1.1 None
ERR718458 Sensitive lineage1.1.3 th
ERR688042 Pre-XDR-TB lineage1.2.2.2 None
ERR752185 HR-TB lineage1.1.1 th
ERR11049959 Sensitive lineage1.1.2 None
ERR752163 Sensitive lineage1.1.3 th
ERR7801222 Other lineage4. None
ERR7902660 Sensitive lineage1.1.2 None
ERR7911174 Pre-XDR-TB lineage2.2.1 vn
ERR9027249 Sensitive lineage4.2.1 None
ERR9124986 Sensitive lineage4.4.1.1 None
ERR9124967 RR-TB lineage1.1.2 None
ERR9124963 Sensitive lineage1.1.2 None
ERR9125624 Other lineage1.1.2 None
ERR9125021 Sensitive lineage4.4.1.1 None
ERR9125857 Sensitive lineage1.1.2 None
ERR9899681 Sensitive lineage4.3.2 None
SRR10808979 Sensitive lineage4.8 None
ERR9901075 Sensitive lineage4.3.2 None
SRR1169547 Sensitive lineage1.1.2 None
SRR1183070 Sensitive lineage1.1.2 None
SRR1172134 Sensitive lineage1.1.2 None
SRR1180171 Sensitive lineage1.1.2 None
SRR11972347 MDR-TB lineage2.2.1 None
SRR11972211 MDR-TB lineage2.2.1 None
SRR16057970 Sensitive lineage4.4.1.1 None
SRR12199409 Other lineage1.2.2.2 None
SRR16058237 Sensitive lineage1.1.2 None
SRR16058214 RR-TB lineage1.1.2 None
SRR16058448 Other lineage1.1.2 None
SRR16370636 Pre-XDR-TB lineage2.2.1 None
SRR16058455 Sensitive lineage4.4.1.1 None
SRR16058477 Sensitive lineage1.1.2 None
SRR16295812 Other lineage2.2.1 None
SRR1710069 Sensitive lineage2.1 cn
SRR1791714 Other La1.7.1 None
SRR1791797 Other La1.7.1 None
SRR1791722 Other La1.7.1 None
SRR1791824 Other La1.7.1 None
SRR1791804 Other La1.7.1 None
SRR1792027 Other La1.7.1 None
SRR1791909 Other La1.7.1 None
SRR1792005 Other La1.7.1 None
SRR1791858 Other La1.7.1 None
SRR1791959 Other La1.7.1 None
SRR1792111 Other La1.7.1 None
SRR1792101 Other La1.7.1 None
SRR1792108 Other La1.7.1 None
SRR1792409 Other La1.7.1 None
SRR1792118 Other La1.7.1 None
SRR1792171 Other La1.7.1 None
SRR1792410 Other La1.7.1 None
SRR1792109 Other La1.7.1 None
SRR1792110 Other La1.7.1 None
SRR1792147 Other La1.7.1 None
SRR21677867 Sensitive lineage4.1.1.3 None
SRR19324802 Sensitive lineage1.2.2.2 None
SRR21277120 Sensitive lineage4.5 None
SRR21658553 Sensitive lineage4.3.3 None
SRR21277049 Sensitive lineage4.5 None
SRR21746995 MDR-TB lineage2.1 None
ERR8025535 Pre-XDR-TB lineage2.2.1 None
ERR11082564 Sensitive lineage4.1.2.1 None
ERR4813107 Pre-XDR-TB lineage4 None
SRR3085263 MDR-TB lineage2.2.1 None
ERR2229592 Sensitive lineage4.8 None
ERR1199071 HR-TB lineage4.6.1.1 ug
SRR2024912 Pre-XDR-TB lineage2.2.1.1 cn
ERR4813203 Pre-XDR-TB lineage4 None
ERR1950033 Sensitive lineage4.8 None
ERR212113 Sensitive lineage1.1.2 mw
ERR2229140 Other lineage4.8 None
SRR2024943 Pre-XDR-TB lineage2.2.1.1 cn
SRR2024991 Pre-XDR-TB lineage2.2.1.1 cn
SAMN02598984 Sensitive lineage1.1.2 in
SRR4033203 Sensitive lineage4.9 None
ERR2229477 Sensitive lineage4.8 None
ERR245813 Sensitive lineage1.1.2 mw
ERR2228838 RR-TB lineage4.8 None
ERR4818317 Sensitive lineage1.2.2.2 gb
ERR2510548 Pre-XDR-TB lineage4;lineage1.1.2 pk
ERR2510725 Pre-XDR-TB lineage4.8 it
ERR2513459 Sensitive lineage1.1.3.2 gb