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SRA data
Rv0005
- c.769C>T
Drug resistance types
7 Sensitive
0 RR-TB
1 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.2.1.2.1
3
lineage3
1
lineage2.2.1
1
lineage1.1.2
1
lineage4.3.3
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
lineage4.3.4.2
1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
1
Showing 1 to 8 of 8 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
10
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR13432038
Sensitive
lineage1.2.1.2.1
None
ERR2513901
Sensitive
lineage1.1.2
gb
ERR5908193
Sensitive
lineage1.2.1.2.1
None
ERR5979515
Sensitive
lineage4.3.3
None
ERR6358991
HR-TB
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
None
ERR9119143
Sensitive
lineage1.2.1.2.1
None
ERR9285839
Sensitive
lineage4.3.4.2
None
SRR20632775
MDR-TB
lineage2.2.1
None
SRR29096988
Sensitive
lineage3
None
Showing 1 to 10 of 10 entries
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