Rv0005 - p.Arg446Cys
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
0 MDR-TB
124 Pre-XDR-TB
17 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 15 |
| lineage2.2.2 | 18 |
| lineage2.2.1 | 77 |
| lineage4.3.3 | 3 |
| lineage4.8 | 8 |
| lineage4.2.1 | 2 |
| lineage6.3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.3.4.2 | 4 |
| lineage4.1.2.1.1 | 3 |
| lineage2.2.1;lineage3 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.2 | 2 |
| lineage4.3.2 | 4 |
| lineage4.3.4.1 | 1 |
| lineage4.8.1 | 3 |
| lineage4.1.1.3 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.1.4 | 2 |
| lineage2.1 | 1 |
| lineage4.2.2 | 1 |
| lineage4.5 | 1 |
| lineage4.9 | 1 |
| lineage4.2.1.1 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 161 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13262083 | Pre-XDR-TB | lineage3 | None | SRR16157101 | XDR-TB | lineage2.2.2 | None | ERR5987381 | Pre-XDR-TB | lineage2.2.1 | None | SRR6485032 | Other | lineage4.3.3 | None | SRR1181093 | Pre-XDR-TB | lineage2.2.1 | None | ERR4195270 | Other | lineage4.8 | None | ERR9120089 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975029 | XDR-TB | lineage2.2.2 | None | SRR29681435 | XDR-TB | lineage2.2.1 | None | SRR7645870 | Pre-XDR-TB | lineage4.2.1 | None | ERR11082316 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274019 | Pre-XDR-TB | lineage4.8 | None | ERR9806882 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055880 | XDR-TB | lineage2.2.2 | None | ERR11049964 | Other | lineage6.3.1 | None | ERR1873394 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975782 | XDR-TB | lineage2.2.2 | None | SRR24466796 | Pre-XDR-TB | lineage4.7 | None | SRR6824670 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13288889 | Pre-XDR-TB | lineage2.2.2 | None | SRR12420319 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056308 | XDR-TB | lineage2.2.2 | None | ERR13285816 | Pre-XDR-TB | lineage4.1 | None | ERR1035286 | Pre-XDR-TB | lineage4.1.2.1 | br | ERR9121327 | Other | lineage4.3.4.2 | None | ERR760607 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR25827661 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR11488967 | Pre-XDR-TB | lineage4.3.4.2.1 | None | SRR1172368 | Pre-XDR-TB | lineage2.2.1 | None | ERR3077941 | Pre-XDR-TB | lineage2.2.1 | None | SAMN03246352 | Pre-XDR-TB | lineage2.2.1 | cn | ERR017799 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163101 | Pre-XDR-TB | lineage2.2.1 | None | SRR6785153 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02419628 | Pre-XDR-TB | lineage2.2.1 | by | ERR4831540 | XDR-TB | lineage2.2.2 | None | ERR8025602 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806957 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288744 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02419558 | Pre-XDR-TB | lineage2.2.1 | by | ERR4810889 | Pre-XDR-TB | lineage4.4.2 | cn | ERR5864534 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911583 | Pre-XDR-TB | lineage2.2.1 | za | SRR25827618 | Pre-XDR-TB | lineage3 | None | ERR2515910 | Pre-XDR-TB | lineage2.2.1 | za | ERR5864533 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055823 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025445 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207116 | Pre-XDR-TB | lineage4.4.2 | None | ERR2513160 | Pre-XDR-TB | lineage3 | gb | ERR5987459 | Pre-XDR-TB | lineage2.2.1 | None | SRR5486886 | Pre-XDR-TB | lineage4.8 | None | SRR16089630 | Other | lineage4.3.2 | None | ERR4195377 | Other | lineage4.3.4.2 | None | ERR5987245 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748550 | XDR-TB | lineage2.2.1 | None | SRR10808379 | Other | lineage2.2.1 | None | ERR5864280 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274212 | Pre-XDR-TB | lineage4.8 | None | ERR4797720 | XDR-TB | lineage3 | in | ERR4827585 | Pre-XDR-TB | lineage2.2.1 | None | SRR1050530 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017109 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR1169027 | Pre-XDR-TB | lineage2.2.1 | None | SRR16370391 | Pre-XDR-TB | lineage2.2.2 | None | ERR5987386 | Pre-XDR-TB | lineage2.2.1 | None | SRR7070080 | Pre-XDR-TB | lineage3 | None | SRR13232582 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748104 | Pre-XDR-TB | lineage2.2.1 | None | SRR26159060 | Pre-XDR-TB | lineage2.2.1 | None | ERR1873535 | Pre-XDR-TB | lineage2.2.1 | za | SRR25827513 | XDR-TB | lineage2.2.1;lineage3 | None | ERR7911700 | Pre-XDR-TB | lineage2.2.1 | za | ERR11488483 | Pre-XDR-TB | lineage4.3.3 | None | SRR16157103 | XDR-TB | lineage2.2.2 | None | ERR7911582 | Pre-XDR-TB | lineage2.2.1 | za | ERR9119723 | Pre-XDR-TB | lineage2.2.1 | None | SRR10380167 | Pre-XDR-TB | lineage4.2.1 | None | SRR20632791 | Pre-XDR-TB | lineage2.2.1 | None | ERR4813842 | HR-TB | lineage4.3.4.1 | None | SRR22424726 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748139 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971341 | Pre-XDR-TB | lineage4.8.1 | None | SRR10869270 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287826 | Pre-XDR-TB | lineage4.1.1.3 | pe | SRR14179705 | Pre-XDR-TB | lineage3 | None | SRR24498059 | XDR-TB | lineage3 | None | ERR2510292 | Pre-XDR-TB | lineage3 | pk | SRR29081564 | Pre-XDR-TB | lineage4.3.2 | None | ERR9807038 | Pre-XDR-TB | lineage4.1.1.2 | None | SRR29273897 | Pre-XDR-TB | lineage4.8 | None | SRR10869104 | Pre-XDR-TB | lineage2.2.1 | None | ERR760767 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | ERR9121457 | Other | lineage4.8 | None | SRR29093758 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553931 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR4827834 | Pre-XDR-TB | lineage2.2.1 | None | ERR4972527 | Pre-XDR-TB | lineage4.1.4 | None | ERR7911689 | Pre-XDR-TB | lineage2.2.1 | za | SRR1163313 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184621 | Other | lineage4.8 | pe | ERR760844 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR10869100 | XDR-TB | lineage2.2.2 | None | SRR6824297 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13291051 | Pre-XDR-TB | lineage2.1 | None | ERR10762278 | Pre-XDR-TB | lineage4.1 | None | ERR10748124 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827792 | XDR-TB | lineage2.2.1 | None | ERR9119871 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120090 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864279 | Pre-XDR-TB | lineage2.2.1 | None | SRR10808883 | Other | lineage4.8 | None | ERR2184264 | Other | lineage2.2.1 | pe | ERR10748517 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748334 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748408 | Pre-XDR-TB | lineage2.2.1 | None | SRR26937126 | HR-TB | lineage4.2.2 | None | SRR20969903 | Other | lineage4.5 | None | ERR5917731 | Pre-XDR-TB | lineage4.3.3 | by | SRR29289332 | Pre-XDR-TB | lineage3 | None | ERR8975778 | XDR-TB | lineage2.2.2 | None | SRR1723610 | Pre-XDR-TB | lineage2.2.1 | None | SRR10430385 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119773 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799586 | Pre-XDR-TB | lineage3 | in | ERR5987444 | Pre-XDR-TB | lineage2.2.1 | None | SRR23082916 | Other | lineage4.9 | None | ERR4800013 | Pre-XDR-TB | lineage3 | in | ERR4819736 | Pre-XDR-TB | lineage3 | gb | ERR1873460 | XDR-TB | lineage2.2.2 | za | ERR4829144 | Pre-XDR-TB | lineage3 | pk | ERR10225448 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723869 | Pre-XDR-TB | lineage2.2.1 | cn | SRR1013581 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832425 | Other | lineage4.2.1.1 | None | SRR6045781 | Other | lineage3 | gb | SRR25340942 | Other | lineage4.1.4 | None | ERR7911151 | Pre-XDR-TB | lineage2.2.2 | vn | ERR10748435 | Pre-XDR-TB | lineage2.2.1 | None | SRR10303333 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181152 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096470 | Pre-XDR-TB | lineage2.2.1 | None | ERR5758353 | Pre-XDR-TB | lineage2.2.1 | None | SRR1144733 | Pre-XDR-TB | lineage2.2.2 | None | ERR5758352 | XDR-TB | lineage2.2.2 | None | ERR5865732 | Pre-XDR-TB | lineage2.2.1 | None | ERR4808875 | Pre-XDR-TB | lineage2.2.2 | za | ERR1873464 | Pre-XDR-TB | lineage2.2.1 | za | ERR4828861 | Pre-XDR-TB | lineage3 | None | SRR25827643 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR13291307 | Other | lineage4.3.2 | None | ERR7911538 | Pre-XDR-TB | lineage4.1.1.2 | za | SRR28409512 | Other | lineage4.3.2 | None | ERR4798283 | Pre-XDR-TB | lineage3.1.2 | in | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315471 | Pre-XDR-TB | lineage4.8.1 | None | ERR4830500 | Pre-XDR-TB | lineage4.8.1 | za | ERR4831107 | Pre-XDR-TB | lineage2.2.1 | de | ERR9807008 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799155 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5865731 | Pre-XDR-TB | lineage2.2.1 | None |
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