Rv0006 - c.-143C>T
Drug resistance types
86 Sensitive
2 RR-TB
24 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 77 |
| 27 | |
| lineage4.9 | 14 |
| lineage4.1.2.1 | 5 |
| lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage3 | 1 |
| lineage1.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.2.1 | 3 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675246 | Sensitive | lineage4 | None | SRR14782405 | HR-TB | None | SRR14801749 | Sensitive | None | SRR16157123 | Other | lineage4.9 | None | SRR17406753 | Sensitive | lineage4.1.2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4817998 | Other | lineage3 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR751843 | Sensitive | lineage1.1.1 | th | SRR5341425 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341299 | Sensitive | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045503 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR4798458 | Sensitive | lineage1.2.2.2 | in | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | ERR4799934 | Sensitive | lineage4.9 | in | SRR6511621 | HR-TB | None | ERR4800001 | Sensitive | lineage1.2.2.2 | in | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6982196 | Sensitive | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | ERR502510 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR3283040 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR6358979 | Other | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866410 | Sensitive | None | ERR736834 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None |
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