Rv0006 - c.-146C>T
Drug resistance types
20 Sensitive
0 RR-TB
19 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| 17 | |
| lineage4.1.2.1 | 2 |
| lineage4.9;lineage2.1 | 1 |
| La2 | 1 |
| lineage2.1 | 3 |
| lineage4 | 9 |
| lineage5.2 | 2 |
| lineage4.1 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.9 | 5 |
| lineage3.1.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1 | 1 |
| lineage3 | 3 |
| lineage4.3.4 | 1 |
| lineage1.2.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341470 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR502524 | HR-TB | La2 | None | SRR6045892 | Sensitive | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4832052 | HR-TB | lineage2.1 | vn | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6982196 | Sensitive | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR7535082 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323107 | Other | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR323039 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6358979 | Other | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4797474 | Other | None | ERR736848 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6866410 | Sensitive | None | ERR736865 | HR-TB | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR751326 | Sensitive | lineage4 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1174897 | HR-TB | None | SRR1173788 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | ERR4798278 | MDR-TB | lineage3 | in | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR2510568 | Pre-XDR-TB | lineage3 | pk | SRR4035833 | Other | lineage4.1.2 | None | ERR4820224 | Sensitive | lineage3 | None |
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