Rv0006 - c.-19G>T
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
20 MDR-TB
36 Pre-XDR-TB
4 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 50 |
| lineage1.1.2;lineage2.2.1;lineage3 | 1 |
| lineage1.1.2;lineage2.2.1 | 2 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.2.2.2;lineage2.2.1 | 2 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage2.2.1.2;lineage4.9 | 1 |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
| lineage2.2.1;lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage2.2.1;lineage3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 63 |
Geographic prevalence
Country level data for this variant is available for 32 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR7585399 | Pre-XDR-TB | lineage2.2.1 | in | SRR28409329 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044933 | XDR-TB | lineage2.2.1 | None | SRR15014694 | MDR-TB | lineage2.2.1 | None | SRR25827770 | XDR-TB | lineage2.2.1 | None | SRR17856682 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424779 | XDR-TB | lineage2.2.1 | None | ERR4797209 | Pre-XDR-TB | lineage2.2.1 | in | SRR8237322 | HR-TB | lineage2.2.1 | np | SRR25827760 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage3 | None | ERR4800221 | HR-TB | lineage1.1.2;lineage2.2.1 | in | SRR25827456 | MDR-TB | lineage2.2.1 | None | ERR4798868 | Pre-XDR-TB | lineage2.2.1;lineage4 | in | ERR4797535 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796481 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796263 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798127 | Pre-XDR-TB | lineage2.2.1 | in | ERR4831015 | Pre-XDR-TB | lineage2.2.1 | np | ERR4798269 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800360 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797163 | Pre-XDR-TB | lineage2.2.1 | in | SRR21733316 | Other | lineage2.2.1 | None | ERR11069067 | MDR-TB | lineage2.2.1 | None | ERR3132126 | MDR-TB | lineage2.2.1 | None | ERR4797798 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827676 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796448 | Pre-XDR-TB | lineage2.2.1 | in | ERR2516865 | MDR-TB | lineage2.2.1 | gb | SRR25827565 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR4798903 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796836 | MDR-TB | lineage2.2.1 | in | ERR4799246 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796383 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800485 | Pre-XDR-TB | lineage2.2.1 | in | ERR4800278 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827452 | MDR-TB | lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | None | ERR2516711 | MDR-TB | lineage2.2.1 | nl | SRR17657966 | MDR-TB | lineage2.2.1.2;lineage4.9 | None | ERR4796730 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796771 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796805 | MDR-TB | lineage2.2.1 | in | SRR25827495 | MDR-TB | lineage1.1.2;lineage2.2.1 | None | ERR4830975 | Pre-XDR-TB | lineage2.2.1 | np | SRR25827449 | MDR-TB | lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | None | SRR28044352 | MDR-TB | lineage2.2.1 | None | SRR28351477 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044612 | MDR-TB | lineage2.2.1 | None | SRR25827776 | Pre-XDR-TB | lineage2.2.1;lineage4.3.4.2 | None | SRR25827868 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | None | ERR4800365 | Pre-XDR-TB | lineage2.2.1 | in | SRR22424795 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800684 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827667 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796786 | MDR-TB | lineage2.2.1 | in | SRR15014687 | MDR-TB | lineage2.2.1 | None | SRR25827375 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | ERR1213886 | MDR-TB | lineage2.2.1 | np | SRR15364442 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800570 | Pre-XDR-TB | lineage2.2.1 | in | SRR25827719 | MDR-TB | lineage2.2.1;lineage3 | None | SRR25827530 | XDR-TB | lineage2.2.1;lineage4 | None | ERR2516976 | MDR-TB | lineage2.2.1 | gb | ERR4800193 | Pre-XDR-TB | lineage2.2.1 | in |
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