Rv0006 - c.-242T>C


Drug resistance types
112 Sensitive 1 RR-TB 152 HR-TB 11 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 73 Other
lineage Counts
lineage Count
lineage4.9 64
145
lineage2.2.1.1 4
lineage4 72
lineage4.6.2.2 4
lineage2.2.1 11
lineage1.1 1
lineage3.1 2
lineage4.1.2.1 11
lineage2.2 4
lineage4.1 3
lineage4.2.1.1 1
La2 1
lineage4.1.2 1
lineage4.4.1.2 1
La1 2
lineage5.1.2 1
lineage3.1.2 1
lineage4.5 1
lineage4.3.4 2
lineage3.1.2.2;lineage3.1.2.1 1
La3 1
lineage4.9;lineage2.2 1
lineage2 1
lineage4.4.1.1.1 1
lineage1.2.1.2 1
lineage7;lineage2.2.1.2 1
La1.8.1 1
lineage9;lineage3.1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.9;lineage4.6.3 1
lineage4.1.1.3 1
lineage4.3 1
lineage4.8 1
lineage5.1.4 1
lineage4.1.1.2 1
lineage4.2.1 2
lineage4.3.2.1 1
lineage3 2
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 354
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046611 HR-TB lineage4.9 None
SRR6046644 HR-TB None
SRR6325447 HR-TB None
SRR6079962 HR-TB lineage2.2.1.1 None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
SRR6046897 Sensitive lineage4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6458421 MDR-TB lineage2.2.1 None
ERR3077978 Other lineage1.1 None
ERR323034 HR-TB lineage3.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
SRR6325442 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR323036 HR-TB None
ERR4831546 HR-TB lineage2.2 None
ERR4831638 Sensitive None
ERR294248 HR-TB None
SRR6789624 MDR-TB lineage4.1 None
ERR2184355 Sensitive lineage4.1.2.1 pe
SRR6832178 HR-TB lineage4.2.1.1 None
ERR4812780 HR-TB lineage4.1.2.1 pe
ERR502510 Sensitive lineage4 None
ERR502889 Other None
ERR502524 HR-TB La2 None
ERR323038 HR-TB None
ERR5311099 HR-TB None
ERR5311081 HR-TB None
ERR5311090 HR-TB None
SRR9970980 Other lineage4.1.2 None
SRR8217918 HR-TB None
SRR7535082 Sensitive lineage4 None
ERR323045 HR-TB None
SRR9971114 Other lineage2.2.1 None
ERR323039 HR-TB None
ERR323041 HR-TB None
ERR323056 HR-TB lineage4.4.1.2 None
ERR323053 HR-TB None
ERR323054 HR-TB lineage3.1 None
ERR323055 HR-TB None
ERR1034652 Other None
ERR323063 HR-TB None
ERR323108 HR-TB lineage4 None
ERR1023525 HR-TB lineage4 None
ERR067681 HR-TB None
ERR1023295 HR-TB lineage4.1.2.1 None
ERR1063862 HR-TB None
ERR1063855 Other lineage4 None
ERR133986 HR-TB None
ERR1063858 HR-TB None
ERR1063859 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR3283017 HR-TB None
ERR3283010 Other La1 None
ERR3283028 Other None
ERR3283014 HR-TB None
ERR3283021 HR-TB None
ERR3283024 Other None
ERR3283040 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3283032 HR-TB None
ERR3445504 HR-TB None
ERR3283047 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3439432 Other None
ERR3283057 HR-TB lineage4 None
ERR3445501 HR-TB None
ERR349265 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR3468544 HR-TB None
ERR349330 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR369158 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR373945 HR-TB lineage4 None
ERR3797016 HR-TB None
ERR3797014 Other None
ERR3797043 HR-TB None
ERR3797017 Other None
ERR3797036 HR-TB None
ERR3797061 Other None
ERR3797047 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797044 Other None
ERR3797063 HR-TB None
ERR3797080 HR-TB lineage4.9 None
ERR400345 Other lineage4 None
ERR3797064 Sensitive None
ERR3797083 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR3797082 Other lineage4.9 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR387051 HR-TB None
ERR400326 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR403298 HR-TB lineage4 None
ERR4025000 Sensitive lineage4.1.2.1 None
ERR4188247 HR-TB None
ERR4188350 HR-TB None
ERR4596910 Sensitive lineage4 None
ERR4797474 Other None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4769442 HR-TB lineage4 None
ERR4769452 HR-TB None
ERR4769521 HR-TB None
ERR4796929 Sensitive lineage4 None
ERR4797184 Sensitive lineage4 None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769450 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4796577 MDR-TB None
ERR4797264 Sensitive None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798262 HR-TB La1 None
ERR4798406 HR-TB None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4811030 Sensitive None
ERR4811031 Sensitive lineage4.5 None
SRR16915725 Sensitive lineage4.1.2.1 None
ERR4812155 Sensitive None
ERR6358979 Other None
ERR6358951 HR-TB lineage4 None
ERR6358837 HR-TB None
ERR6359074 HR-TB lineage4.9 None
ERR6358991 HR-TB None
ERR6359066 HR-TB lineage4 None
ERR736835 HR-TB None
ERR6865554 Sensitive lineage4.1.2.1 None
ERR736817 HR-TB lineage4.3.4 None
SRR10809074 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786843 Other None
ERR987722 HR-TB None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
SRR10808669 Sensitive lineage4.1.2.1 None
ERR736848 HR-TB None
ERR736865 HR-TB None
ERR736875 HR-TB lineage4 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8976043 HR-TB None
ERR9119669 HR-TB None
SRR10808805 Sensitive None
SRR1167384 Other lineage4 None
SRR1172310 HR-TB None
SRR1169249 Other La3 None
SRR1174897 HR-TB None
SRR1175487 Sensitive lineage4.9 None
SRR1180270 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180444 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181325 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 Other lineage2.2.1.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR11972367 Sensitive lineage2.2.1 None
SRR1183145 Other lineage2.2.1 None
SRR1184024 Other lineage2.2.1.1 None
SRR14801749 Sensitive None
SRR14782405 HR-TB None
SRR1640750 HR-TB None
SRR19295647 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR1791696 Other La1.8.1 None
SRR21677886 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR25827418 Pre-XDR-TB lineage9;lineage3.1 None
SRR21726719 HR-TB lineage4.1.2.1 None
SRR3675464 HR-TB lineage4.1 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR176778 HR-TB None
SRR12708416 Sensitive lineage4.1 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR3675502 Other None
SRR3675477 Other lineage4.9 None
ERR176779 HR-TB None
ERR1035239 HR-TB None
SRR6325445 HR-TB None
ERR550636 MDR-TB lineage4.1.1.3 None
ERR161033 HR-TB None
SAMN02585910 Other lineage2.2.1 None
ERR158583 HR-TB None
SRR3675488 HR-TB None
SRR3675501 HR-TB None
ERR161039 Sensitive lineage4.3.4 None
SRR3675486 HR-TB None
ERR181744 HR-TB None
SRR3675209 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
SRR3675210 Sensitive lineage4.9 None
SRR3675246 Sensitive lineage4 None
SRR3675234 Other None
ERR181824 HR-TB lineage4 None
SRR3675249 Sensitive lineage4.9 None
SRR3675280 HR-TB lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675270 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675247 Other lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675279 Other None
SRR3675284 HR-TB lineage4.9 None
ERR176643 HR-TB None
ERR181887 HR-TB None
ERR176651 HR-TB None
SRR3675292 Sensitive lineage4 None
SRR3675387 Sensitive None
SRR3675312 HR-TB lineage4 None
SRR3675318 Other lineage4.9 None
SRR3675537 Sensitive lineage4.9 None
SRR3675456 HR-TB None
ERR176751 HR-TB None
SRR3675455 Sensitive lineage4 None
SRR3675510 Other None
SRR3675522 Other None
ERR176740 HR-TB None
SRR3675514 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
ERR4816151 Other lineage4.8 None
SRR3675541 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
SRR3675545 HR-TB None
SRR3675553 Sensitive lineage4.9 None
ERR212034 HR-TB None
SRR3675550 Other None
ERR212001 HR-TB None
ERR212123 Other None
SRR3675555 HR-TB None
SRR3675558 HR-TB None
ERR212121 HR-TB None
ERR212125 HR-TB lineage4 None
SRR3675577 Sensitive lineage4.9 None
ERR1035162 Other None
ERR4816656 HR-TB None
ERR4816466 HR-TB None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR2513283 Other lineage5.1.4 None
ERR4818929 HR-TB None
ERR4818252 Other lineage4.1.1.2 None
SRR5341373 HR-TB lineage4 None
ERR2512770 Other lineage4.2.1 None
SRR5341456 Other None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341418 Other None
SRR5341400 HR-TB lineage4 None
SRR5341296 Sensitive lineage4.9 None
ERR4820387 Other lineage3 None
SRR5341432 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341437 Sensitive lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR5341330 HR-TB None
SRR5341313 HR-TB None
SRR5341315 Sensitive None
ERR2514929 HR-TB lineage1.1.2 None
SRR5341323 Sensitive lineage4 None
SRR5341345 Sensitive lineage4.9 None
SRR5341470 HR-TB None
ERR2693231 Other None
ERR2693230 Other None
ERR2693239 HR-TB None
ERR2693254 Other None
SRR6045503 HR-TB None
SRR5535933 HR-TB None
SRR6045519 HR-TB None
ERR2693257 Other None
ERR278594 HR-TB None
ERR2660539 Other lineage4.9 None
ERR2693227 Other lineage4.9 None
SRR6044876 Sensitive lineage4 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
ERR4821655 Sensitive lineage4 None
SRR6045555 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR6046046 Other None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6045053 Other None
SRR6045191 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046210 Other lineage4 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045233 HR-TB None
ERR4830353 Other None
SRR6046299 HR-TB None
SRR6325444 HR-TB None
SRR6046362 HR-TB None
SRR6046385 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046482 HR-TB None
SRR6046460 HR-TB None
SRR6325448 HR-TB None
SRR6046514 HR-TB None
SRR6046594 HR-TB lineage4 None