Rv0006 - c.-245C>T
Drug resistance types
16 Sensitive
1 RR-TB
42 HR-TB
1 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| lineage4 | 13 |
| 30 | |
| lineage1.2.2.2 | 3 |
| lineage2.2.1 | 4 |
| La2 | 1 |
| lineage3.1 | 2 |
| lineage4.1 | 1 |
| lineage4.7 | 1 |
| lineage3.1.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| La3 | 1 |
| lineage2.2.1.1 | 3 |
| lineage4.3.4.1 | 1 |
| lineage2.2 | 2 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 79 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4819357 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341470 | HR-TB | None | ERR11049710 | Sensitive | lineage1.2.2.2 | None | SRR5535933 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6044835 | Sensitive | lineage4 | None | SRR7585439 | Sensitive | lineage1.2.2.2 | in | SRR6046362 | HR-TB | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046460 | HR-TB | None | ERR4798923 | Sensitive | lineage1.2.2.2 | in | ERR502524 | HR-TB | La2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR294266 | HR-TB | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR323036 | HR-TB | None | ERR323039 | HR-TB | None | ERR323038 | HR-TB | None | SRR7535082 | Sensitive | lineage4 | None | ERR12057442 | Sensitive | lineage4.7 | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323063 | HR-TB | None | ERR323041 | HR-TB | None | ERR323055 | HR-TB | None | ERR323053 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR387051 | HR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR4828773 | Sensitive | lineage2.2.1 | vn | ERR6358837 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR702404 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR10808805 | Sensitive | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR14801749 | Sensitive | None | SRR1169249 | Other | La3 | None | SRR1174897 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1167384 | Other | lineage4 | None | SRR1172310 | HR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR4815471 | Other | lineage4.9 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR23691342 | Sensitive | lineage2.2.1.1 | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675456 | HR-TB | None | ERR4816944 | RR-TB | lineage2.2 | None | SRR3675545 | HR-TB | None | ERR176643 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None |
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