Rv0006 - c.-500G>A
Drug resistance types
8 Sensitive
1 RR-TB
42 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| 33 | |
| lineage4.9 | 8 |
| lineage2.1 | 1 |
| lineage4 | 15 |
| lineage4.3.3 | 1 |
| lineage4.8 | 3 |
| lineage2.2.1 | 3 |
| La2 | 1 |
| lineage4.3.4.2.1 | 2 |
| lineage3.1.2 | 1 |
| lineage2.2.1.1 | 2 |
| lineage4.6.1.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675501 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675222 | Other | None | ERR212001 | HR-TB | None | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341456 | Other | None | SRR5341470 | HR-TB | None | SRR2100912 | MDR-TB | lineage4.8 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | ERR6359082 | Other | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | ERR278525 | MDR-TB | lineage4.8 | None | SRR6045519 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6046397 | Other | None | SRR6046385 | Other | lineage4.9 | None | ERR4830353 | Other | None | ERR1063855 | Other | lineage4 | None | ERR294266 | HR-TB | None | ERR323053 | HR-TB | None | ERR1034634 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR1034652 | Other | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR386884 | MDR-TB | lineage4.8 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736865 | HR-TB | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | SRR1172310 | HR-TB | None | ERR987722 | HR-TB | None | SRR1174897 | HR-TB | None | SRR1183106 | Other | lineage2.2.1.1 | None | ERR176778 | HR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR3675488 | HR-TB | None | ERR176779 | HR-TB | None | ERR161034 | Other | lineage4.3.4.2.1 | None |
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