Rv0006 - c.-527G>C
Drug resistance types
102 Sensitive
7 RR-TB
134 HR-TB
31 MDR-TB
16 Pre-XDR-TB
0 XDR-TB
134 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1;La3 | 1 |
| lineage4.1 | 3 |
| lineage4.9;La3 | 1 |
| La1.2 | 2 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9 | 69 |
| 145 | |
| lineage4.1.1.3 | 2 |
| lineage4.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage2.2.1 | 25 |
| lineage2.1 | 4 |
| lineage4.3.4 | 2 |
| lineage4 | 79 |
| lineage1.2.1.1 | 1 |
| lineage3 | 3 |
| lineage2.2 | 9 |
| lineage1.1.2 | 3 |
| lineage4.8 | 4 |
| lineage4.8;La3 | 2 |
| La1.8.1 | 3 |
| lineage4.2.2.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4.7 | 2 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1.2.1 | 9 |
| lineage5.2 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1 | 1 |
| La2 | 1 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.8.1 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.9;La1.3 | 1 |
| lineage2 | 4 |
| lineage3.1.2 | 1 |
| lineage4.5 | 3 |
| lineage4.6.1.1 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage6.1.3 | 1 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3.1 | 2 |
| lineage1.1.1 | 1 |
| La1.4 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 424 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR26937071 | MDR-TB | lineage2.2.1;La3 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR23961549 | Other | La1.2 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR3675502 | Other | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR176793 | Other | lineage4.1.1 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR158583 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3416776 | Other | lineage2.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR3275450 | Other | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675229 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675247 | Other | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675279 | Other | None | SRR3675311 | Other | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR176740 | HR-TB | None | ERR4815752 | Other | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675510 | Other | None | SRR3675522 | Other | None | ERR4816999 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817060 | RR-TB | None | SRR3675550 | Other | None | SRR3675572 | Other | None | ERR212123 | Other | None | SRR3675574 | HR-TB | None | ERR4816417 | Other | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | ERR4815815 | Sensitive | lineage4 | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816585 | Other | lineage2.2 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818929 | HR-TB | None | SRR5341396 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341453 | Sensitive | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341418 | Other | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR2514692 | Other | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341313 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341366 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2517475 | Other | lineage4 | None | SRR5341470 | HR-TB | None | SRR5341469 | Other | lineage4 | None | SRR5535933 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044790 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044855 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045205 | Sensitive | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046225 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6046824 | HR-TB | None | SRR6511621 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872094 | MDR-TB | lineage5.2 | None | SRR6046540 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | SRR6785263 | Sensitive | lineage2.2.1 | None | SRR6785262 | Sensitive | lineage4.2.1 | None | SRR6789626 | Other | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR502510 | Sensitive | lineage4 | None | ERR502524 | HR-TB | La2 | None | ERR502532 | HR-TB | None | ERR11465151 | Sensitive | lineage4.3.4.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7496471 | Sensitive | None | ERR502943 | HR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535086 | Other | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1035122 | Sensitive | None | ERR067681 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1035157 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR1063857 | HR-TB | None | ERR3283021 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283028 | Other | None | ERR3283025 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283043 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283036 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3439432 | Other | None | ERR5336148 | Other | None | ERR363447 | Sensitive | lineage4 | None | ERR3797071 | Other | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4407463 | HR-TB | None | ERR4769419 | Other | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769457 | Other | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796577 | MDR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797474 | Other | None | ERR4798406 | HR-TB | None | ERR4798099 | Other | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4799378 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4800341 | Other | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4812155 | Sensitive | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6359045 | HR-TB | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR6358951 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR752229 | Other | lineage4.5 | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117709 | HR-TB | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786440 | Other | lineage4.1 | None | ERR9634265 | Sensitive | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786604 | Other | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR990545 | Other | lineage3 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR10808805 | Sensitive | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1169194 | Other | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR1172728 | MDR-TB | None | SRR10809074 | Sensitive | lineage4 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172717 | Other | lineage4.9 | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172857 | MDR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1175074 | MDR-TB | None | SRR1173777 | Other | lineage4 | None | SRR1175049 | RR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181214 | Other | lineage4.9 | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196494 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR15368973 | Other | None | SRR16278274 | Other | La1.4 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR1791747 | Other | La1.8.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR19303884 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR20632814 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR25827682 | Other | None | SRR21677886 | Sensitive | lineage4.9 | None |
|---|
