Rv0006 - c.-86G>C
Drug resistance types
85 Sensitive
2 RR-TB
151 HR-TB
19 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
103 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 8 |
| lineage4 | 72 |
| 170 | |
| lineage4.6.1.1 | 1 |
| lineage4.9 | 37 |
| lineage4.3.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.1 | 2 |
| lineage4.1.3 | 2 |
| lineage5.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage6.3.1 | 1 |
| lineage3 | 7 |
| La3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.3 | 4 |
| lineage2.2.1 | 15 |
| lineage2.2.1.1 | 3 |
| lineage2.2 | 3 |
| lineage3.1 | 4 |
| lineage2 | 2 |
| lineage4.1 | 2 |
| lineage4.5 | 2 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.3 | 1 |
| La1.8.1 | 3 |
| lineage4.1.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage5.1.4 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.1 | 1 |
| lineage1.1 | 1 |
| La2 | 1 |
| lineage4.7 | 1 |
| lineage4.4.1.2 | 1 |
| La1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 367 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6358979 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR7910877 | MDR-TB | lineage4.1.1 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR8976043 | HR-TB | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9787197 | Other | None | ERR9786843 | Other | None | ERR9787139 | Other | lineage6.3.1 | None | ERR987722 | HR-TB | None | SRR10808805 | Sensitive | None | ERR990545 | Other | lineage3 | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1172817 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173400 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR12142341 | HR-TB | None | SRR15368973 | Other | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR13232473 | Sensitive | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR4815604 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR6325445 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR158583 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675501 | HR-TB | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675221 | HR-TB | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR176643 | HR-TB | None | SRR3675311 | Other | None | SRR3675318 | Other | lineage4.9 | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | ERR4816999 | Other | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675545 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675550 | Other | None | ERR212033 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4817998 | Other | lineage3 | None | ERR234659 | HR-TB | None | ERR4818021 | Other | La1.8.1 | None | ERR1035162 | Other | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818615 | Other | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4818619 | Sensitive | lineage3 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341418 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341302 | HR-TB | None | SRR5341333 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693254 | Other | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR6045526 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046210 | Other | lineage4 | None | SRR6045327 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046225 | HR-TB | None | SRR6045399 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046362 | HR-TB | None | ERR4830353 | Other | None | SRR6046482 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325447 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046824 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR5311090 | HR-TB | None | SRR6325442 | HR-TB | None | ERR323037 | HR-TB | lineage4 | None | ERR4832002 | Pre-XDR-TB | lineage2.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323036 | HR-TB | None | ERR502532 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831638 | Sensitive | None | ERR294248 | HR-TB | None | SRR6831950 | Other | lineage4.3.3 | None | SRR6785227 | Other | lineage2.2.1 | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR502889 | Other | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR7496509 | Other | None | SRR7496523 | Other | lineage4.7 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7535086 | Other | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323063 | HR-TB | None | ERR067681 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283028 | Other | None | ERR133986 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283024 | Other | None | ERR3283036 | HR-TB | None | ERR3283047 | HR-TB | None | ERR4821179 | Other | lineage4.1.2.1 | gb | ERR3283057 | HR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR5336148 | Other | None | ERR3468544 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349299 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797069 | Other | None | ERR3797060 | Other | La1.8.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797064 | Sensitive | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797079 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798504 | Other | lineage3 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811022 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None |
|---|
