Rv0006 - c.1842T>C
Drug resistance types
11474 Sensitive
272 RR-TB
1738 HR-TB
1464 MDR-TB
238 Pre-XDR-TB
70 XDR-TB
12267 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.8.1 | 6972 |
| lineage1.2.2.2 | 2217 |
| lineage1.1.3.1 | 890 |
| lineage1.1.1 | 962 |
| La1.2 | 666 |
| lineage6.1.3 | 400 |
| lineage1.2.2.1 | 401 |
| La3 | 230 |
| lineage1.1.3.3 | 189 |
| lineage1.1.2 | 3802 |
| lineage6.1.2 | 119 |
| La2 | 252 |
| lineage1.2.1.2.1 | 2820 |
| La1.7.1 | 930 |
| lineage5.1.5;lineage6.1.1 | 1 |
| lineage1.2.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1 | 18 |
| lineage6 | 39 |
| La1.2.BCG | 540 |
| lineage1.2.1.2 | 456 |
| lineage5.1.4 | 80 |
| La1.3 | 134 |
| lineage1.1.1.1 | 1370 |
| lineage1.2.2.2;lineage4.8 | 2 |
| lineage1.2.1.1 | 192 |
| lineage6.2.3 | 111 |
| lineage1.1.3 | 190 |
| lineage6.3.1 | 286 |
| lineage1.2.1 | 52 |
| lineage2.1;lineage4.9;lineage6.3 | 10 |
| La1.6 | 134 |
| M.canetti;lineage2.1;lineage4.9 | 20 |
| lineage6.1.1 | 241 |
| La1.4 | 117 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 5 |
| La1.8.2 | 250 |
| lineage6.2.1 | 32 |
| lineage5.3 | 47 |
| lineage5.1.1 | 204 |
| lineage5.2 | 60 |
| lineage6.2.2 | 87 |
| lineage5.1.2 | 67 |
| lineage1.2.2.2;lineage2.2.1 | 20 |
| lineage5.1.3 | 40 |
| lineage1.1.3.2 | 472 |
| lineage1.1.1;lineage4 | 3 |
| lineage1.1 | 31 |
| lineage1.1.1.1;lineage4.1 | 2 |
| lineage1.1.1.1;lineage2.2.1 | 23 |
| lineage4.9;lineage7 | 4 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| La1.7.X-unk4 | 81 |
| lineage4.1.3;lineage6.3.1 | 5 |
| lineage4.3.4.2.1 | 3 |
| lineage2.2 | 4 |
| lineage4.8 | 2 |
| lineage4.9 | 60 |
| lineage7 | 77 |
| lineage5 | 29 |
| La1.7 | 31 |
| lineage1.2.2.2;lineage4.3.4.2.1 | 2 |
| lineage1.2.2.2;lineage4 | 8 |
| M.canetti | 67 |
| lineage4.7;lineage6.3.1 | 1 |
| lineage1.1.2;lineage3.1.2 | 5 |
| lineage1.1.2;lineage1.1.3.3 | 6 |
| lineage5.1.5 | 22 |
| lineage1.2.2.1;lineage4.3.4.2 | 1 |
| lineage9 | 33 |
| lineage4.6.3;lineage4.9 | 3 |
| lineage1.1.2;lineage2.2.1.1 | 1 |
| lineage1.1.1;lineage1.2.1.2.1 | 1 |
| lineage1.1.1.1;lineage4.2.1 | 1 |
| lineage1.1;lineage4 | 1 |
| lineage1.1.1.1;lineage4.4.2 | 1 |
| lineage1.1.1;lineage2.2.1 | 7 |
| lineage2.1 | 5 |
| lineage8 | 5 |
| La3;lineage4.9 | 4 |
| lineage1.1.2;lineage4.1.2.1 | 4 |
| lineage2.1;lineage4.9 | 17 |
| lineage1.1.3.2;lineage4.1.1.3 | 2 |
| lineage1.1.2;lineage4.1 | 1 |
| lineage1.2.2.2;lineage4.1.2 | 2 |
| lineage4.6.2.2;lineage6.1.2 | 1 |
| lineage1.1.2;lineage3 | 11 |
| lineage5.1 | 69 |
| lineage1.2.2.1;lineage4 | 4 |
| La3;M.canetti | 11 |
| lineage4.1.3 | 3 |
| lineage1.2.2.1;lineage4.1.2 | 4 |
| La1.7.X-unk5 | 13 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4 | 4 |
| lineage6.3.3 | 51 |
| La1.8.1;lineage4.9 | 2 |
| lineage1.1.3.1;lineage2.2.1.2 | 1 |
| lineage1.2.2.1;lineage4.1.1.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3 | 2 |
| lineage1.2.2 | 24 |
| La3;lineage4.1.2 | 1 |
| lineage4.8;lineage5.1.1 | 3 |
| lineage6.3.2 | 26 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.2.2;lineage4.3.3 | 3 |
| La1.3;lineage1.2.2.2 | 15 |
| lineage4.9;lineage6.3 | 8 |
| lineage1.2.1.2;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 4 |
| La2;M.canetti | 1 |
| lineage1.1.1.1;lineage2.2.1.1 | 6 |
| lineage1.2.2.2;lineage3;lineage4.4.1.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1;lineage6.1.3 | 1 |
| lineage1.2.2.2;lineage3 | 11 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 3 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.2;lineage2.2.1 | 15 |
| lineage1.1.2;lineage3.1.1 | 7 |
| lineage4;lineage6.2.2 | 1 |
| lineage4.1.2.1 | 11 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage1.1.1;lineage4.2.2 | 1 |
| La1.2.BCG;La1.8.2 | 1 |
| La1.5 | 7 |
| lineage1.2.2.2;lineage4.3.2.1 | 3 |
| La1.1 | 9 |
| lineage1.1.3.1;lineage4.3.3 | 1 |
| lineage1.2.1.2.1;lineage4.4.2 | 1 |
| lineage4.1.2.1;lineage6.1.1 | 2 |
| lineage1;lineage2.2.1;lineage4.9 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2 | 1 |
| lineage1.2.2.2;lineage3.1.2 | 1 |
| La1.2.BCG;lineage1.1.1 | 1 |
| lineage1.1.2;lineage4.3.2.1 | 2 |
| La1.2.BCG;lineage4 | 1 |
| lineage1;lineage2.2.1;lineage3;lineage4 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.2;lineage4 | 3 |
| lineage1.1.2;lineage1.2.2.2 | 13 |
| lineage2.2.1;lineage3 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage1.1.2;lineage4.4 | 1 |
| lineage6.1.3;lineage6.2 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage1.1.2;lineage3;lineage4 | 1 |
| La1.8.X-unk6 | 9 |
| lineage1.2.2.1;lineage4.3.4.2.1 | 3 |
| lineage1.1.1;lineage2.2.1.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.6;La3;lineage4.9 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage4.1.2.1;lineage6.3.1 | 4 |
| lineage1.1.1.1;lineage2.2.1;lineage4.2.2 | 1 |
| lineage2.2.1.1;lineage6.1.2 | 1 |
| lineage4.1.2.1;lineage6.3.2 | 1 |
| lineage4.4.1.1 | 2 |
| lineage1.1.3.2;lineage4.3.4.2.1 | 4 |
| lineage1.1.2;lineage4 | 12 |
| lineage1.1.2;lineage2.2.1;lineage4 | 1 |
| lineage1.1.1.1;lineage1.1.2 | 1 |
| lineage1.1.3.1;lineage1.2.2.2 | 3 |
| lineage1.1.2;lineage4.8 | 4 |
| lineage1.2.1.1;lineage4 | 2 |
| lineage1.1.3.2;lineage1.2.2.2 | 4 |
| La1.2;La1.8.1 | 1 |
| lineage1.1.2;lineage4.1.1.3 | 2 |
| La1.7;lineage4.9 | 3 |
| lineage3.1 | 1 |
| lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage3.1.2.2 | 1 |
| lineage5.1.1;lineage5.1.2;lineage6.3.1 | 1 |
| lineage1.2.1.1;lineage4.1.1.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 | 1 |
| M.canetti;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.2 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1.2.BCG;lineage4.9 | 6 |
| La1.2;La1.8.2 | 1 |
| lineage1.2.2.2;lineage4.8.1 | 1 |
| lineage1.1.3.1;lineage4 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1 | 1 |
| lineage1 | 2 |
| lineage1.2.2.2;lineage4.2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3 | 3 |
| lineage1.1.3.3;lineage4 | 1 |
| lineage2.2.1.1;lineage6.1.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage1.1.3.1;lineage2.2.1 | 3 |
| La1.6;lineage4 | 1 |
| lineage1.1.3.2;lineage3.1.2 | 1 |
| lineage1.1.2;lineage4.9 | 4 |
| lineage1.1.2;lineage3.1.1;lineage4 | 2 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage1.1.2;lineage4.3.4.2.1 | 3 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage1.1.3.2;lineage4.1.2.1 | 1 |
| lineage4;lineage6.3.1 | 4 |
| lineage1.1.2;lineage3.1.1;lineage4.6.1.1 | 2 |
| lineage3.1.1 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.1.3.1;lineage3;lineage4.4.2 | 1 |
| La1.1;lineage3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage6.1 | 2 |
| lineage1.1;lineage1.2.2.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage1.2.2.1;lineage4.8.1 | 1 |
| lineage4.6.2.2;lineage6 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 2 |
| lineage5.1.2;lineage6.3.1 | 1 |
| lineage4.8;lineage6.3.1 | 1 |
| lineage3.1.2;lineage4.9 | 1 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4 | 1 |
| lineage1.2.1.2.1;lineage3 | 1 |
| La1.6;lineage4.1 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage4.3.4.1;lineage4.6.2.2;lineage6.1.2 | 1 |
| La1.8.1;lineage4 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.3 | 2 |
| lineage1.1.2;lineage1.1.3.1 | 4 |
| lineage1.2.1.2.1;lineage2.2.1 | 6 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage6.1.3;lineage6.3.3 | 1 |
| La2;lineage4.9 | 2 |
| lineage1.1.1;lineage2.2.1.1 | 1 |
| lineage2.2.1;lineage4.8 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 2 |
| lineage4.6.2.2 | 3 |
| lineage1.1.3.3;lineage2.2.1 | 1 |
| lineage1.1.2;lineage4.1.2.1;lineage4.1.3 | 2 |
| lineage4.1;lineage6.3.1 | 2 |
| lineage1.1.1.1;lineage4.8 | 1 |
| lineage1.1.3.2;lineage3.1.1 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.2;lineage4.3.4.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.6.2.2;lineage6.3.1 | 1 |
| lineage4;lineage6.1.3 | 1 |
| lineage1.2.2.2;lineage4.1.2.1 | 1 |
| lineage1.2.1.2;lineage2.2.1 | 1 |
| lineage3 | 4 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage1.1.2;lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage1.2.2.1;lineage2.2.1.1 | 1 |
| La1.2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage5.3 | 1 |
| lineage4.1.1.3;lineage5.1.2 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
| lineage5.1.1;lineage6.3.1 | 2 |
| lineage1.1.2;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage6.1.3;lineage6.2.2 | 1 |
| lineage6.1.1;lineage6.2 | 1 |
| lineage1.2.1;lineage2.2.1;lineage4;lineage6.3 | 1 |
| lineage6.1.1;lineage6.1.3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.3;lineage6.2.1 | 1 |
| lineage6.2 | 2 |
| lineage4.1.3;lineage5.1.1 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| lineage1.1.2;lineage6.2.3 | 1 |
| La3;lineage4.8 | 2 |
| La1;lineage1.1.2 | 2 |
| lineage2.2.1.1 | 3 |
| lineage1.2.1.2.1;lineage4.1.2.1 | 1 |
| La1.8.1;La3 | 1 |
| La3;lineage2 | 1 |
| lineage4.3.4.2;lineage6.1.3 | 1 |
| La1.7.1;La1.8.1 | 1 |
| lineage2.2.1;lineage6.1.3 | 2 |
| lineage1.2.2.2;lineage4.1.1.3 | 2 |
| lineage1.1.3.1;lineage4.7 | 1 |
| lineage4.8.1 | 1 |
| lineage1.1.2;lineage2 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1;lineage4 | 1 |
| lineage1.1.2;lineage4.1.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage1.2.2.2;lineage4.1.1.1 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.1;lineage4.6.1 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1.3.2;lineage4.3.4.2 | 1 |
| lineage4.1.1.3 | 3 |
| lineage1.1.2;lineage4.3.4.2.1;lineage4.4 | 1 |
| lineage1.2.1.2.1;lineage4.1.2 | 1 |
| lineage1.2.1.2.1;lineage4 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage6.1.1;lineage6.3.1 | 1 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4;lineage6.2.1 | 1 |
| La1.3;lineage1.2.1.2.1 | 1 |
| lineage1.1.1;lineage1.1.3.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1.2;lineage4.1.2;lineage4.3.4.2.1 | 1 |
| lineage1;lineage3.1.1;lineage4.2.2.2 | 1 |
| lineage1.2.1.2.1;lineage4.3.4.1 | 1 |
| lineage1.2.1.2;lineage4.5 | 1 |
| lineage1.1.3.2;lineage3.1.1;lineage4 | 1 |
| La1 | 8 |
| M.canetti;lineage2.2 | 2 |
| lineage1.1.1.1;lineage2.2 | 1 |
| lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage1.1.3.1;lineage3 | 1 |
| lineage1.1.2;lineage4.7 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| La1.1;lineage1.2.1.2.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4 | 1 |
| lineage1.1.3.3;lineage2.2.1;lineage3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage1.1.2;lineage4.3.3 | 1 |
| lineage4.3.3;lineage6.2.2 | 1 |
| La1.8;lineage1.2.2.2 | 1 |
| 95 | |
| lineage1.1.2;lineage1.1.3.1;lineage2.2.1 | 1 |
| La1.2;La1.7.1 | 1 |
| lineage1.1.3.2;lineage2.2.1 | 1 |
| lineage1.1.2;lineage1.1.3 | 1 |
| La1.1;lineage1.2.2.2 | 1 |
| lineage1.1.3.1;lineage1.2.1.2.1 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La1.2;La2 | 1 |
| lineage3.1;lineage9 | 1 |
| lineage1.1.3;lineage4.2.2.2 | 1 |
| lineage1.1.3;lineage1.2.2.2 | 1 |
| lineage1;lineage2.2.1 | 1 |
| lineage1.1.1.1;lineage6.1.3 | 1 |
| La3;M.canetti;lineage4.9 | 2 |
| lineage1.1.2;lineage2.2.1.2 | 1 |
| lineage1.2.2.2;lineage2.2 | 1 |
| lineage5.1.1;lineage5.1.2 | 1 |
| La1;lineage4.9 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage1.1.2;lineage4.2.2 | 1 |
| lineage1.1.2;lineage1.1.3.2 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage5 | 1 |
| lineage1.1.1.1;lineage4.2.2 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage1.2.1.2.1;lineage4.5 | 1 |
| lineage4.1.2.1;lineage6.1.3 | 1 |
| lineage4.3.4.1;lineage6.1.1 | 1 |
| lineage1.1;lineage2.2;lineage3.1.1;lineage4.2.2.2;lineage4.3.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| lineage1.1.3.2;lineage4.1.2 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage1.1.1.1;lineage1.2.1.2.1 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| M.canetti;lineage2.1;lineage4 | 1 |
| lineage1.1.1.1;lineage4.1.2.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage1.1;lineage3.1.1;lineage4;lineage5.1 | 1 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| lineage1.1.1.1;lineage4.5 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.2;lineage3 | 1 |
| lineage1.1.3;lineage2.2.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1.2.2;lineage3.1.2 | 1 |
| lineage4.9.1 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage4.2.2.1;lineage5 | 1 |
| lineage4.7 | 1 |
| La3;lineage1.1.2 | 1 |
| La1.2.BCG;La1.8.1;lineage4 | 1 |
| lineage1.2.1.2.1;lineage4.3.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage4.1.2.1;lineage6.2.3 | 1 |
| lineage1.1.1;lineage4.8 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 27523 |
Geographic prevalence
Country level data for this variant is available for 5349 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 27523 rows and could cause your browser to crash if rendered.
