Rv0006 - c.1842T>C
Drug resistance types
3910 Sensitive
72 RR-TB
687 HR-TB
470 MDR-TB
102 Pre-XDR-TB
1 XDR-TB
1815 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 1248 |
| lineage1.2.1.2.1 | 838 |
| lineage1.2.2.2 | 739 |
| La1.8.1 | 856 |
| lineage1.1.1.1 | 688 |
| lineage6.3.2 | 9 |
| lineage1.1.3.1 | 188 |
| lineage4.3.4.2.1;lineage1.2.2.1 | 3 |
| La3 | 50 |
| La1.7.1 | 46 |
| lineage1.1.1 | 472 |
| lineage7 | 57 |
| M.bovis | 188 |
| La1.8.2 | 11 |
| lineage1.1.3.2 | 210 |
| lineage5.1.1 | 127 |
| lineage2.2.1;lineage1.1.1 | 5 |
| lineage6.3.1 | 81 |
| La1.4 | 26 |
| lineage4.2.2;lineage1.1.2 | 2 |
| lineage1.1.3 | 61 |
| lineage1.1.3.3 | 75 |
| lineage1.2.2.1 | 147 |
| La1.2.BCG | 58 |
| lineage5.1 | 32 |
| lineage1.2.1.2 | 115 |
| lineage4.5 | 1 |
| lineage1.2.1.1 | 92 |
| lineage2.2.1;lineage1.1.3 | 1 |
| lineage4.4.2;lineage1.1.1.1 | 2 |
| lineage6.1.1 | 18 |
| lineage5.1.5 | 13 |
| lineage5.3 | 15 |
| lineage5.1.3 | 14 |
| lineage3.1.1;lineage1.1.3.2 | 3 |
| lineage5.2 | 32 |
| lineage4;lineage1.1.3.2 | 4 |
| La1.7.X-unk4 | 9 |
| lineage5.1.4 | 47 |
| M.orygis | 13 |
| lineage1.1 | 26 |
| lineage6.2.3 | 12 |
| La1.6 | 8 |
| lineage6.2.2 | 12 |
| lineage4.9.1 | 1 |
| lineage2.2.1;lineage1.1.2 | 9 |
| lineage5.1.2 | 28 |
| lineage1.2.2.2;lineage1.1.2 | 6 |
| lineage2.2.1;lineage1.1.1.1 | 16 |
| lineage4.3.3;lineage1.2.1.2.1 | 1 |
| lineage6.2.1 | 17 |
| lineage4.8;lineage1.1.1 | 1 |
| La1.2 | 34 |
| lineage6 | 22 |
| lineage6.1.2 | 5 |
| lineage4.8;lineage1.2.2.2 | 1 |
| lineage4.3.4.2.1 | 2 |
| La1.1 | 3 |
| lineage6.3.3 | 12 |
| lineage4.9 | 3 |
| lineage4.1;lineage1.1.1.1 | 1 |
| lineage4;lineage1.2.2.2 | 6 |
| lineage4.1.2.1;lineage1.1.2 | 3 |
| lineage4;lineage1.2.2.1 | 4 |
| lineage2.2.1 | 4 |
| lineage4.1.1.3;lineage1.1.3.2 | 2 |
| 54 | |
| lineage5 | 9 |
| lineage4.1;lineage1.1 | 1 |
| lineage4.1;lineage1.1.2 | 1 |
| lineage4;lineage1.1.2 | 7 |
| lineage1.2.1 | 7 |
| La2 | 16 |
| La1.3 | 3 |
| lineage5.1.1;lineage4.8 | 1 |
| lineage2.2.1.1;lineage1.1.1.1 | 1 |
| lineage4.4.1.1;lineage3;lineage1.2.2.2 | 1 |
| lineage4.3.3;lineage1.2.2.2 | 1 |
| lineage4.2.2;lineage1.1.1 | 1 |
| lineage4.3.2.1;lineage1.2.2.2 | 1 |
| M.caprae | 1 |
| lineage6.2.2;lineage4 | 1 |
| lineage4.3.3;lineage1.1.3.1 | 1 |
| lineage4.4.2;lineage1.2.1.2.1 | 1 |
| lineage4.7;lineage4.4.1;lineage4.3.4.2.1;lineage4.3.3;lineage2.2.1;lineage1.1.3 | 1 |
| La1.2 BCG | 1 |
| lineage3.1.2;lineage1.2.2.2 | 1 |
| lineage4;La1.2.BCG | 1 |
| lineage4.9;lineage4.3.4.2.1;lineage4.1;lineage3.1.1;lineage1.1.3.2 | 1 |
| lineage4.4;lineage1.1.2 | 1 |
| lineage9 | 3 |
| lineage6.1.3 | 4 |
| lineage2.2.1.2;lineage1.1.1 | 1 |
| lineage4.1.2;lineage1.2.2.2 | 1 |
| lineage1 | 8 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.2.1;lineage1.1.3.2 | 4 |
| lineage6.3.1;lineage5.1.2;lineage5.1.1 | 1 |
| lineage4.9;lineage2.2.1;lineage1 | 1 |
| lineage1.2.2.2;lineage1.1.3.2 | 3 |
| lineage2.2.1;lineage1.2.2.2 | 4 |
| lineage4.1.2;lineage1.1.2 | 2 |
| La1 | 5 |
| lineage4.8;lineage1.1.2 | 2 |
| lineage4.9;lineage1.1.2 | 1 |
| lineage4;lineage1.1.3.3 | 1 |
| lineage4.3.4.2.1;lineage1.1.2 | 2 |
| lineage4.1.2.1;lineage1.1.3.2 | 1 |
| lineage4.4.2;lineage3;lineage1.1.3.1 | 1 |
| lineage3;M.bovis | 1 |
| lineage2.2.1.1;lineage1.1.1 | 1 |
| lineage3;lineage1.1.2 | 4 |
| lineage6;lineage4.6.2.2 | 1 |
| lineage6.3.1;lineage5.1.2 | 1 |
| lineage3;lineage1.2.2.2 | 4 |
| lineage3;lineage1.2.1.2.1 | 1 |
| lineage4.1.1.3;lineage1.1.2 | 1 |
| lineage4.3.4.1;lineage1.1.2 | 1 |
| lineage2.2.1;lineage1.2.1.2 | 1 |
| lineage1.2.2.2;lineage1.1.3 | 2 |
| lineage5.3;lineage4.1.2.1 | 1 |
| lineage2.2 | 3 |
| lineage2.2.1;lineage1.2.1.2.1 | 2 |
| lineage2.2.1;M.orygis | 1 |
| M.orygis;M.bovis | 1 |
| lineage4.7;lineage1.1.3.1 | 1 |
| lineage2.2;lineage1.1.1.1 | 1 |
| lineage4.1.1.3;lineage1.2.2.2 | 1 |
| lineage6.1.3;lineage2.2.1 | 1 |
| lineage2.1 | 4 |
| lineage4;lineage3.1.2.1;lineage2.2.1;lineage1.2.2.2 | 1 |
| lineage4.8 | 1 |
| lineage3.1.2.1;lineage1.1.2 | 1 |
| lineage4;lineage1.2.1.2.1 | 1 |
| lineage4.4;lineage4.3.4.2.1;lineage1.1.2 | 1 |
| lineage1.1.3.3;lineage1.1.2 | 1 |
| lineage4.3.4.2.1;lineage1.2.2.2 | 1 |
| lineage1.1.3.3;lineage1.1.1 | 1 |
| lineage4;lineage3.1.1;lineage1.1.3.2 | 1 |
| lineage5.1.2;lineage4.1.1.3 | 1 |
| La1.7.X-unk5 | 1 |
| lineage4.3;lineage2.1 | 1 |
| lineage3;lineage1.1.3.1 | 1 |
| lineage6.2.2;lineage4.3.3 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage6.3 | 1 |
| La1.8.2;La1.2 | 1 |
| lineage2.2;lineage1 | 1 |
| La1.8 | 2 |
| lineage4;lineage1.2.1.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage5.1.2;lineage5.1.1 | 1 |
| lineage1.1.3.2;lineage1.1.2 | 1 |
| lineage4.8;La3 | 1 |
| lineage1.2.2 | 1 |
| lineage4.1.2;lineage1.1.3.2 | 1 |
| M.caprae;M.bovis | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 7057 |
Geographic prevalence
Country level data for this variant is available for 5471 isolates.
Statisctical support
Not enough data to calculate support.
Samples
This table has 7057 rows and could cause your browser to crash if rendered.
