Rv0006 - c.2457C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
13 Sensitive 0 RR-TB 4 HR-TB 7 MDR-TB 20 Pre-XDR-TB 1 XDR-TB 0 Other
lineage Counts
lineage Count
lineage3.1.2 35
lineage1.2.2.2;lineage3.1.2 1
lineage4.1.2.1 5
lineage3 2
lineage4.3.3 1
lineage3.1.2;lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 45
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4796779 Pre-XDR-TB lineage3.1.2 in
ERR4799912 Pre-XDR-TB lineage1.2.2.2;lineage3.1.2 in
ERR4800344 Pre-XDR-TB lineage3.1.2 in
ERR4800585 Pre-XDR-TB lineage3.1.2 in
ERR4800594 Pre-XDR-TB lineage3.1.2 in
SRR21733252 Sensitive lineage4.1.2.1 None
SRR28044458 Sensitive lineage4.1.2.1 None
SRR28044515 Sensitive lineage3.1.2 None
ERR4799050 Pre-XDR-TB lineage3.1.2 None
SRR28351585 Pre-XDR-TB lineage3.1.2 None
ERR4798685 XDR-TB lineage3.1.2 in
ERR4799874 Pre-XDR-TB lineage3.1.2 in
SRR25340839 Sensitive lineage3.1.2 None
ERR13261350 MDR-TB lineage3.1.2 None
ERR13266113 Pre-XDR-TB lineage3.1.2 None
SRR25340779 Sensitive lineage3.1.2 None
SRR25340746 Sensitive lineage3.1.2 None
SRR671873 Sensitive lineage3 cn
ERR4798032 Pre-XDR-TB lineage3.1.2 in
ERR4799756 MDR-TB lineage3.1.2 in
ERR4800501 MDR-TB lineage3.1.2 in
SRR22424920 HR-TB lineage3.1.2 None
ERR2517123 MDR-TB lineage3.1.2 gb
SRR25340862 Sensitive lineage3.1.2 None
ERR11067860 Sensitive lineage4.1.2.1 None
ERR13266731 Pre-XDR-TB lineage3.1.2 None
ERR13266821 Pre-XDR-TB lineage3.1.2 None
ERR4796673 Pre-XDR-TB lineage3.1.2 in
ERR4797531 Pre-XDR-TB lineage3.1.2 in
ERR4798378 Pre-XDR-TB lineage3.1.2 in
ERR4799976 Pre-XDR-TB lineage3.1.2 in
ERR4800192 MDR-TB lineage3.1.2 in
ERR4797906 HR-TB lineage3.1.2 in
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR29772457 MDR-TB lineage3.1.2 None
ERR13261479 Pre-XDR-TB lineage3.1.2 None
ERR2179836 Sensitive lineage3 None
ERR4829796 HR-TB lineage4.3.3 None
ERR13266822 Pre-XDR-TB lineage3.1.2 None
ERR11067273 Sensitive lineage4.1.2.1 None
SRR29772572 MDR-TB lineage3.1.2 None
ERR4799994 Pre-XDR-TB lineage3.1.2;lineage4.3.3 None
SRR21732840 Sensitive lineage4.1.2.1 None
ERR13262152 HR-TB lineage3.1.2 None
SRR25340925 Sensitive lineage3.1.2 None